| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is cstA [H]
Identifier: 119867884
GI number: 119867884
Start: 1958358
End: 1960652
Strand: Reverse
Name: cstA [H]
Synonym: Mkms_1845
Alternate gene names: 119867884
Gene position: 1960652-1958358 (Counterclockwise)
Preceding gene: 119867885
Following gene: 119867883
Centisome position: 34.17
GC content: 67.54
Gene sequence:
>2295_bases GTGGCCACACCCACCGCCGCGCCATCGGAGCGTTTCGAGGAGACCGACGGCGACGTCACGTACATCCGCACGGACAAGGA TCTGCCGCCGGTGGCGATCATCGACCGGTCCCCGATCACCACCAGGCACCGGATCGTCTTCGGCCTCATCGCGCTCGCGG GGGCGATCGCCTGGGCGGTGATCGCCTTCTTCCGCGGGGAGACCGTCAACGCCGTCTGGTTCGTGATCGCCGCCATCTGC ACGTACGTGGTGGCATTCCGGTTCTACGCGCGCCTGATCGAGATGAACATCGTCAAACCGCGCGACGACAATGCCACGCC TGCAGAGCTTTTCGAGAACGCCACCGACTATGTTCCGACCGACCGCCGGGTGCTGTTCGGTCACCACTTCGCCGCCATCG CCGGCGCCGGCCCGCTCGTCGGCCCGGTCCTGGCCATGCAGATGGGCTTCCTGCCGGGCACCATCTGGATCATCATCGGC GCGGTGTTCGCCGGGTGTGTGCAGGACTATCTGGTGCTGTCGATCTCGACGCGGCGCCGGGGCCGCTCGCTGGGCCAGAT GGCCCGCGACGAACTGGGCGCCGTCGGCGGGGCCGCCGCGATCGTCGGCGTGCTGGTCATCATGGTCATCCTGCTGGCGG TGCTGGCACTGGTGGTCGTACAGGCGCTGGCCCAGAGCCCCTGGGGTGTGTTCTCCATCTCGATGACGATCCCGATCGCA TTGTTCATGGGTGTCTACCTGAGGTTCCTGCGCCCGGGCCGGGTGTCCGAGGTGTCGGTGATCGGCGTGGCGCTGCTCCT GCTGGCCGTCGCCTCCGGCCGTTGGGTGGCCGAAACATCCTGGGGCGCATCCTGGTTCGATCTGTCGCCGGTGGCGCTGA GCTGGGCGATCATCCTCTACGGGCTGGCCGCGTCGGTGTTGCCGGTGTGGCTGCTGCTCGCCCCGCGCGACTACCTGTCG ACGTTCATGAAGGTCGGCACCATCGCGCTGCTGGCGGTCGGCATCCTCATCGCCCGCCCGGTCATGGAGGCGCCGGCGAT CTCGAACTTCGCCGCCAGCGGCACCGGGCCGGTGTTCGCCGGATCCCTGTTCCCGTTCCTGTTCATCACGATCGCCTGCG GGGCGCTCTCGGGCTTCCACTCGCTGATCTCCTCGGGCACCACGCCGAAGCTGCTCGAGAAGGAAAGCCAGATGCGGCTG ATCGGCTACGGCGGCATGCTGACCGAGTCGTTCGTGGCGATCATGGCCCTGATCACCGCCGCGATCCTCAACCAGCACCT GTACTTCACGCTCAACGCGCCCGCCGCCCAGACCGGCGGCACGGCCGAGACCGCGGCGGAGTACGTCAACAACCTCGGAC TGTCCGGCGCCCCGATCACCCCCGAGCAGATCGACGAGGCCGCCAGGAGCGTGGGTGAGAGCTCGATCGTGTCGCGCACC GGCGGCGCGCCCACGTTGGCGTTCGGCATGTCCGAAGTGCTCAGCAGCGTGTTCGGCGGCGACGCGCTCAAGGCTTTCTG GTACCACTTCGCGATCATGTTCGAGGCCCTGTTCATCCTCACCACCGTCGACGCCGGCACCCGCGTGGCGCGGTTCATGC TGTCCGACGGTCTGTCGAATCTCGGTGGGCCACTGCGGAAACTGAAGGACCCGAGCTGGCGCGTCGGAGCCTGGGCCTGC AGCGTGATCGTCGTGGCCGCGTGGGGCAGCATCCTGCTGATGGGGGTCACCGATCCGCTCGGTGGCATCAACACGCTGTT CCCGCTGTTCGGTATCGCCAACCAGCTGCTGGCGGCGATCGCGCTGACCGTCGTCACGGTCGTCGTCCTGAAGAAGGGTC TGGGCAAGTGGGCGCTGGTGCCGGGCATTCCGCTGCTGTGGGATCTGGTCATCACGCTGACCGCGTCGTGGCAGAAGATC TTCTCCGGCGACCCCAAGGTCGGCTACTGGACCCAGCACTTCCAGTACAAGACGGCGCTGGCGCAGGGTAAGGAGTCGTT CGGCGCGGCCAAGAACCCCGACCAGATGAACGACGTCATCCGCAACACCTTCATCCAGGGCACCCTGTCCATCGTGTTCG CCGTGCTGGTCGTGATCGTCTTCGCGGCGGGGGTCGTCATGGCGGTGCGCGCCCTGCGGGGCACCGCCCCGCCGACCACC GAGGACGAGGAGGTGCCGTCGCGGATCTTCGGTCCGTCCGGCCTGCACACCACCGCCCGGGAGAAGGAGGTGCAGAAACA GTGGGACGCGCTACCGTCATCGCACGCCAGATCCGTTGGTACGTCGCCTCGTTGA
Upstream 100 bases:
>100_bases GCACGGCTGAAACCCCGGAATCGGCGCACGGGCGATCTGGCCGGTGCAAGTATCGACACCACGGGCATCTGACACTGTCG CGCCATCGTAGGGAGGGATC
Downstream 100 bases:
>100_bases TGGGCGACAACCACTACCGCCGTTACCTCGAGCACCGGCGGCGCACCCATCCGGGAGAACCGGTGCTCACCGAGCGTGAG TACTGGCGGATGCGGCATGC
Product: carbon starvation protein CstA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MATPTAAPSERFEETDGDVTYIRTDKDLPPVAIIDRSPITTRHRIVFGLIALAGAIAWAVIAFFRGETVNAVWFVIAAIC TYVVAFRFYARLIEMNIVKPRDDNATPAELFENATDYVPTDRRVLFGHHFAAIAGAGPLVGPVLAMQMGFLPGTIWIIIG AVFAGCVQDYLVLSISTRRRGRSLGQMARDELGAVGGAAAIVGVLVIMVILLAVLALVVVQALAQSPWGVFSISMTIPIA LFMGVYLRFLRPGRVSEVSVIGVALLLLAVASGRWVAETSWGASWFDLSPVALSWAIILYGLAASVLPVWLLLAPRDYLS TFMKVGTIALLAVGILIARPVMEAPAISNFAASGTGPVFAGSLFPFLFITIACGALSGFHSLISSGTTPKLLEKESQMRL IGYGGMLTESFVAIMALITAAILNQHLYFTLNAPAAQTGGTAETAAEYVNNLGLSGAPITPEQIDEAARSVGESSIVSRT GGAPTLAFGMSEVLSSVFGGDALKAFWYHFAIMFEALFILTTVDAGTRVARFMLSDGLSNLGGPLRKLKDPSWRVGAWAC SVIVVAAWGSILLMGVTDPLGGINTLFPLFGIANQLLAAIALTVVTVVVLKKGLGKWALVPGIPLLWDLVITLTASWQKI FSGDPKVGYWTQHFQYKTALAQGKESFGAAKNPDQMNDVIRNTFIQGTLSIVFAVLVVIVFAAGVVMAVRALRGTAPPTT EDEEVPSRIFGPSGLHTTAREKEVQKQWDALPSSHARSVGTSPR
Sequences:
>Translated_764_residues MATPTAAPSERFEETDGDVTYIRTDKDLPPVAIIDRSPITTRHRIVFGLIALAGAIAWAVIAFFRGETVNAVWFVIAAIC TYVVAFRFYARLIEMNIVKPRDDNATPAELFENATDYVPTDRRVLFGHHFAAIAGAGPLVGPVLAMQMGFLPGTIWIIIG AVFAGCVQDYLVLSISTRRRGRSLGQMARDELGAVGGAAAIVGVLVIMVILLAVLALVVVQALAQSPWGVFSISMTIPIA LFMGVYLRFLRPGRVSEVSVIGVALLLLAVASGRWVAETSWGASWFDLSPVALSWAIILYGLAASVLPVWLLLAPRDYLS TFMKVGTIALLAVGILIARPVMEAPAISNFAASGTGPVFAGSLFPFLFITIACGALSGFHSLISSGTTPKLLEKESQMRL IGYGGMLTESFVAIMALITAAILNQHLYFTLNAPAAQTGGTAETAAEYVNNLGLSGAPITPEQIDEAARSVGESSIVSRT GGAPTLAFGMSEVLSSVFGGDALKAFWYHFAIMFEALFILTTVDAGTRVARFMLSDGLSNLGGPLRKLKDPSWRVGAWAC SVIVVAAWGSILLMGVTDPLGGINTLFPLFGIANQLLAAIALTVVTVVVLKKGLGKWALVPGIPLLWDLVITLTASWQKI FSGDPKVGYWTQHFQYKTALAQGKESFGAAKNPDQMNDVIRNTFIQGTLSIVFAVLVVIVFAAGVVMAVRALRGTAPPTT EDEEVPSRIFGPSGLHTTAREKEVQKQWDALPSSHARSVGTSPR >Mature_763_residues ATPTAAPSERFEETDGDVTYIRTDKDLPPVAIIDRSPITTRHRIVFGLIALAGAIAWAVIAFFRGETVNAVWFVIAAICT YVVAFRFYARLIEMNIVKPRDDNATPAELFENATDYVPTDRRVLFGHHFAAIAGAGPLVGPVLAMQMGFLPGTIWIIIGA VFAGCVQDYLVLSISTRRRGRSLGQMARDELGAVGGAAAIVGVLVIMVILLAVLALVVVQALAQSPWGVFSISMTIPIAL FMGVYLRFLRPGRVSEVSVIGVALLLLAVASGRWVAETSWGASWFDLSPVALSWAIILYGLAASVLPVWLLLAPRDYLST FMKVGTIALLAVGILIARPVMEAPAISNFAASGTGPVFAGSLFPFLFITIACGALSGFHSLISSGTTPKLLEKESQMRLI GYGGMLTESFVAIMALITAAILNQHLYFTLNAPAAQTGGTAETAAEYVNNLGLSGAPITPEQIDEAARSVGESSIVSRTG GAPTLAFGMSEVLSSVFGGDALKAFWYHFAIMFEALFILTTVDAGTRVARFMLSDGLSNLGGPLRKLKDPSWRVGAWACS VIVVAAWGSILLMGVTDPLGGINTLFPLFGIANQLLAAIALTVVTVVVLKKGLGKWALVPGIPLLWDLVITLTASWQKIF SGDPKVGYWTQHFQYKTALAQGKESFGAAKNPDQMNDVIRNTFIQGTLSIVFAVLVVIVFAAGVVMAVRALRGTAPPTTE DEEVPSRIFGPSGLHTTAREKEVQKQWDALPSSHARSVGTSPR
Specific function: Peptide Utilization During Carbon Starvation. [C]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=692, Percent_Identity=51.878612716763, Blast_Score=679, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=705, Percent_Identity=46.8085106382979, Blast_Score=603, Evalue=1e-173,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 81385; Mature: 81254
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPTAAPSERFEETDGDVTYIRTDKDLPPVAIIDRSPITTRHRIVFGLIALAGAIAWAV CCCCCCCCHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IAFFRGETVNAVWFVIAAICTYVVAFRFYARLIEMNIVKPRDDNATPAELFENATDYVPT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC DRRVLFGHHFAAIAGAGPLVGPVLAMQMGFLPGTIWIIIGAVFAGCVQDYLVLSISTRRR CCEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSLGQMARDELGAVGGAAAIVGVLVIMVILLAVLALVVVQALAQSPWGVFSISMTIPIA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH LFMGVYLRFLRPGRVSEVSVIGVALLLLAVASGRWVAETSWGASWFDLSPVALSWAIILY HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHH GLAASVLPVWLLLAPRDYLSTFMKVGTIALLAVGILIARPVMEAPAISNFAASGTGPVFA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHH GSLFPFLFITIACGALSGFHSLISSGTTPKLLEKESQMRLIGYGGMLTESFVAIMALITA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH AILNQHLYFTLNAPAAQTGGTAETAAEYVNNLGLSGAPITPEQIDEAARSVGESSIVSRT HHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCC GGAPTLAFGMSEVLSSVFGGDALKAFWYHFAIMFEALFILTTVDAGTRVARFMLSDGLSN CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHH LGGPLRKLKDPSWRVGAWACSVIVVAAWGSILLMGVTDPLGGINTLFPLFGIANQLLAAI CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHH ALTVVTVVVLKKGLGKWALVPGIPLLWDLVITLTASWQKIFSGDPKVGYWTQHFQYKTAL HHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AQGKESFGAAKNPDQMNDVIRNTFIQGTLSIVFAVLVVIVFAAGVVMAVRALRGTAPPTT HHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EDEEVPSRIFGPSGLHTTAREKEVQKQWDALPSSHARSVGTSPR CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure ATPTAAPSERFEETDGDVTYIRTDKDLPPVAIIDRSPITTRHRIVFGLIALAGAIAWAV CCCCCCCHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IAFFRGETVNAVWFVIAAICTYVVAFRFYARLIEMNIVKPRDDNATPAELFENATDYVPT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC DRRVLFGHHFAAIAGAGPLVGPVLAMQMGFLPGTIWIIIGAVFAGCVQDYLVLSISTRRR CCEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSLGQMARDELGAVGGAAAIVGVLVIMVILLAVLALVVVQALAQSPWGVFSISMTIPIA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH LFMGVYLRFLRPGRVSEVSVIGVALLLLAVASGRWVAETSWGASWFDLSPVALSWAIILY HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHH GLAASVLPVWLLLAPRDYLSTFMKVGTIALLAVGILIARPVMEAPAISNFAASGTGPVFA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHH GSLFPFLFITIACGALSGFHSLISSGTTPKLLEKESQMRLIGYGGMLTESFVAIMALITA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH AILNQHLYFTLNAPAAQTGGTAETAAEYVNNLGLSGAPITPEQIDEAARSVGESSIVSRT HHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCC GGAPTLAFGMSEVLSSVFGGDALKAFWYHFAIMFEALFILTTVDAGTRVARFMLSDGLSN CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHH LGGPLRKLKDPSWRVGAWACSVIVVAAWGSILLMGVTDPLGGINTLFPLFGIANQLLAAI CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHH ALTVVTVVVLKKGLGKWALVPGIPLLWDLVITLTASWQKIFSGDPKVGYWTQHFQYKTAL HHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AQGKESFGAAKNPDQMNDVIRNTFIQGTLSIVFAVLVVIVFAAGVVMAVRALRGTAPPTT HHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EDEEVPSRIFGPSGLHTTAREKEVQKQWDALPSSHARSVGTSPR CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]