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The map label for this gene is ycdL [C]

Identifier: 119867873

GI number: 119867873

Start: 1947347

End: 1947970

Strand: Reverse

Name: ycdL [C]

Synonym: Mkms_1834

Alternate gene names: 119867873

Gene position: 1947970-1947347 (Counterclockwise)

Preceding gene: 119867874

Following gene: 119867872

Centisome position: 33.95

GC content: 69.71

Gene sequence:

>624_bases
ATGACGCCGCGTCTGGCCGAGCTGGTGGCGCCGGCGCACACCGCCCTGGTCACCCAGGAACTGCAGGGTGCGGTCGTCGG
ACCCGGCGCGGGCCTGGCCGCACTCGCCGAGGAGGCCCGACGGTCGGCCCTGCCCAACATCACACGGTTGTTGCCGGTGG
CTCGTGCGGCAGGCGTTCGGGTGGTGCACTGTCTCGTGCAGCGACGGCCCGACGGCCTCGGGTCCAATCACAACGCCAAG
CTGTTCGCGGTCGGTCGCAGCGGGGTGGCCATCGAACCGGGTAGCCCCGGCGCCACCCTGCTCCCCGAATTCGGCCCGGA
GCCTGAAGATCTCGTTCTCGCGCGATGGCACGGACTCGGTCCGATGGGCGGCACCGACCTCGACGCGATCCTGCGCAACC
TGGGGGTCACCACGATCGTCGCCGTCGGCGTATCGCTCAACGTCGCGATCCCCAACCTGGTCATGGACGCGGTCAACGCG
GCCTACCGCGTGGTGCTACCGCGGGACGCGGTCGCCGGGATCCCGACCGAGTACGGCGACGCCGTCATCGACAACACACT
GTCGCTGTTGGCGACGATCACCACCACAGAGGGTCTGCTGCAGACCTGGAAGCAGGAGGCATGA

Upstream 100 bases:

>100_bases
AGCGCTATGTCGAACGGCCGCCGCTGGCCAAGATCGACGCGAAACCGTATATGGCGATGCGGGAGTGGGCCAAACAGTTC
TACGACGTGTCCGCATCGGT

Downstream 100 bases:

>100_bases
TGCAGTTCACGATGCCCCAGGTGGCCGACGCGGTCGCCGAGGTGCTCCCCGACCGCGAACTCGTCGTCCAGGGTGGACAG
CGCCACACGTACGCCGACAT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase; Isochorismatase Family Protein; Hydrolase; LOW QUALITY PROTEIN Isochorismatase; Pyrimidine Utilization Protein B

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTPRLAELVAPAHTALVTQELQGAVVGPGAGLAALAEEARRSALPNITRLLPVARAAGVRVVHCLVQRRPDGLGSNHNAK
LFAVGRSGVAIEPGSPGATLLPEFGPEPEDLVLARWHGLGPMGGTDLDAILRNLGVTTIVAVGVSLNVAIPNLVMDAVNA
AYRVVLPRDAVAGIPTEYGDAVIDNTLSLLATITTTEGLLQTWKQEA

Sequences:

>Translated_207_residues
MTPRLAELVAPAHTALVTQELQGAVVGPGAGLAALAEEARRSALPNITRLLPVARAAGVRVVHCLVQRRPDGLGSNHNAK
LFAVGRSGVAIEPGSPGATLLPEFGPEPEDLVLARWHGLGPMGGTDLDAILRNLGVTTIVAVGVSLNVAIPNLVMDAVNA
AYRVVLPRDAVAGIPTEYGDAVIDNTLSLLATITTTEGLLQTWKQEA
>Mature_206_residues
TPRLAELVAPAHTALVTQELQGAVVGPGAGLAALAEEARRSALPNITRLLPVARAAGVRVVHCLVQRRPDGLGSNHNAKL
FAVGRSGVAIEPGSPGATLLPEFGPEPEDLVLARWHGLGPMGGTDLDAILRNLGVTTIVAVGVSLNVAIPNLVMDAVNAA
YRVVLPRDAVAGIPTEYGDAVIDNTLSLLATITTTEGLLQTWKQEA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21418; Mature: 21287

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRLAELVAPAHTALVTQELQGAVVGPGAGLAALAEEARRSALPNITRLLPVARAAGVR
CCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VVHCLVQRRPDGLGSNHNAKLFAVGRSGVAIEPGSPGATLLPEFGPEPEDLVLARWHGLG
HHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
PMGGTDLDAILRNLGVTTIVAVGVSLNVAIPNLVMDAVNAAYRVVLPRDAVAGIPTEYGD
CCCCCCHHHHHHHCCHHHHHHHCCEEEEHHHHHHHHHHHHHEEEEECCHHHHCCCCHHCH
AVIDNTLSLLATITTTEGLLQTWKQEA
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPRLAELVAPAHTALVTQELQGAVVGPGAGLAALAEEARRSALPNITRLLPVARAAGVR
CCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VVHCLVQRRPDGLGSNHNAKLFAVGRSGVAIEPGSPGATLLPEFGPEPEDLVLARWHGLG
HHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
PMGGTDLDAILRNLGVTTIVAVGVSLNVAIPNLVMDAVNAAYRVVLPRDAVAGIPTEYGD
CCCCCCHHHHHHHCCHHHHHHHCCEEEEHHHHHHHHHHHHHEEEEECCHHHHCCCCHHCH
AVIDNTLSLLATITTTEGLLQTWKQEA
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA