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The map label for this gene is yngJ [H]

Identifier: 119867842

GI number: 119867842

Start: 1912811

End: 1913986

Strand: Reverse

Name: yngJ [H]

Synonym: Mkms_1803

Alternate gene names: 119867842

Gene position: 1913986-1912811 (Counterclockwise)

Preceding gene: 119867847

Following gene: 119867841

Centisome position: 33.36

GC content: 69.47

Gene sequence:

>1176_bases
ATGAGCGAAGTCAGTGACGAGGATTTCCGCGAGATCCTCGCGCAGACAAGACATTTCGTCCGATCCGCCGTGGTCCCGCG
GGAATCCGAGATCCTCGCCGAGGACAAGGTCCCCGACGACCTGCGCGAAGCCGCCAAGAGCATGGGGCTGTTCGGCTACG
CCATTCCGCAGGAATGGGGCGGGCTCGGACTGGATCTGACCCAGGACGTCGAACTGGCCATGGAGTTCGGTTACACCTCA
CTGGCGCTGCGCTCGATGTTCGGCACCAACAACGGCATCGCCGGGCAGGTGCTGGTGGGATTCGGCACCGACGAGCAGAA
GAAGCAGTGGCTCGAGGGCATCGCCTCCGGTGACGTCGTCGCCTCGTTCGCACTCACCGAACCGGGGGCCGGCTCCAATC
CGGCGGGACTGCGGACCAAAGCGGTGCGCGACGACGCCGGCGACTGGGTCGTCAACGGCCAGAAGCGCTTCATCACCAAC
GCCCCGACCGCCGACCTGTTCGTCGTCTTCGCGCGCACCCGGCCGGCGGACGACCGCGGCGCCGGTATCGCGGTGTTCCT
GGTACCCGCCGATGCCGACGGTGTGGAGGTCGGCGCGAAGGACGCCAAGATGGGTCAGGAAGGCGCCTGGACCGCCGATG
TGAACTTCACCGACGTCCGCGTACCGGCCTCGGCGCTCGTCGGCGGCAGCGAGGACATCGGCTACCGCGCCGCACTGATC
ACCCTGGCGCGTGGGCGCGTGCACATCGCCGCGCTCGCGGTCGGCGCCGCGCAACGCGCGCTCGACGAGTCCGTGGCCTA
CGCCGCCACCGCCACGCAGGGCGGCACGCCGATCGGTGACTTCCAGCTGGTGCAGGCGATGCTGGCCGATCAGCAGACCG
GGGTGATGGCCGGGCGGGCGCTGGTCCGCGACGCCGCGCGCAAGTGGGTCACCGACGAGGACCGGCGCATCGCACCGTCG
GCGGCCAAGGTGTTCTGCACCGAGATGGCCGGGCAGGTCGCCGATCTCGCGGTGCAGATCCACGGCGGCACCGGGTACAT
GCGCGAGGTGCCCGTCGAGCGGATCTACCGCGACGTCAGGCTGCTGCGACTCTACGAGGGCACCAGCGAGATCCAGCGCC
TGATCATCGGCGGCGCACTGGTGAAGGCCGCGCAGCGGACGGCGGCGAACTCATGA

Upstream 100 bases:

>100_bases
CGGGGGCCTCCGAGGGGCCCGGTCGGCATACATCGTATTTCATATACGATATTGGCGGCCAGCCACCCCATGGGCCGCCT
ACTGCGACTGGAGGTCGTCG

Downstream 100 bases:

>100_bases
CCGGCCGCCTCGCAGGCAAGGTCGCCTTCATCACCGGCGCGGCCCGCGGCCAGGGGCGTGCGCACGCCGAGCGCCTGGCG
ACCGAGGGTGCCGACATCAT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSEVSDEDFREILAQTRHFVRSAVVPRESEILAEDKVPDDLREAAKSMGLFGYAIPQEWGGLGLDLTQDVELAMEFGYTS
LALRSMFGTNNGIAGQVLVGFGTDEQKKQWLEGIASGDVVASFALTEPGAGSNPAGLRTKAVRDDAGDWVVNGQKRFITN
APTADLFVVFARTRPADDRGAGIAVFLVPADADGVEVGAKDAKMGQEGAWTADVNFTDVRVPASALVGGSEDIGYRAALI
TLARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAMLADQQTGVMAGRALVRDAARKWVTDEDRRIAPS
AAKVFCTEMAGQVADLAVQIHGGTGYMREVPVERIYRDVRLLRLYEGTSEIQRLIIGGALVKAAQRTAANS

Sequences:

>Translated_391_residues
MSEVSDEDFREILAQTRHFVRSAVVPRESEILAEDKVPDDLREAAKSMGLFGYAIPQEWGGLGLDLTQDVELAMEFGYTS
LALRSMFGTNNGIAGQVLVGFGTDEQKKQWLEGIASGDVVASFALTEPGAGSNPAGLRTKAVRDDAGDWVVNGQKRFITN
APTADLFVVFARTRPADDRGAGIAVFLVPADADGVEVGAKDAKMGQEGAWTADVNFTDVRVPASALVGGSEDIGYRAALI
TLARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAMLADQQTGVMAGRALVRDAARKWVTDEDRRIAPS
AAKVFCTEMAGQVADLAVQIHGGTGYMREVPVERIYRDVRLLRLYEGTSEIQRLIIGGALVKAAQRTAANS
>Mature_390_residues
SEVSDEDFREILAQTRHFVRSAVVPRESEILAEDKVPDDLREAAKSMGLFGYAIPQEWGGLGLDLTQDVELAMEFGYTSL
ALRSMFGTNNGIAGQVLVGFGTDEQKKQWLEGIASGDVVASFALTEPGAGSNPAGLRTKAVRDDAGDWVVNGQKRFITNA
PTADLFVVFARTRPADDRGAGIAVFLVPADADGVEVGAKDAKMGQEGAWTADVNFTDVRVPASALVGGSEDIGYRAALIT
LARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAMLADQQTGVMAGRALVRDAARKWVTDEDRRIAPSA
AKVFCTEMAGQVADLAVQIHGGTGYMREVPVERIYRDVRLLRLYEGTSEIQRLIIGGALVKAAQRTAANS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=36.1477572559367, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI21361497, Length=388, Percent_Identity=34.2783505154639, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=35.4666666666667, Blast_Score=206, Evalue=2e-53,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=35.4666666666667, Blast_Score=206, Evalue=2e-53,
Organism=Homo sapiens, GI76496475, Length=390, Percent_Identity=33.5897435897436, Blast_Score=194, Evalue=9e-50,
Organism=Homo sapiens, GI4557235, Length=390, Percent_Identity=33.5897435897436, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI4501857, Length=369, Percent_Identity=33.0623306233062, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI226958412, Length=380, Percent_Identity=31.5789473684211, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI226958414, Length=337, Percent_Identity=32.6409495548961, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=31.0991957104558, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI7656849, Length=380, Percent_Identity=29.7368421052632, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI4503943, Length=380, Percent_Identity=28.1578947368421, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI38505218, Length=388, Percent_Identity=27.5773195876289, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=28.25, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=28.25, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI7669494, Length=356, Percent_Identity=27.5280898876405, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI87081958, Length=351, Percent_Identity=31.0541310541311, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1786223, Length=347, Percent_Identity=28.8184438040346, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI87081702, Length=336, Percent_Identity=27.6785714285714, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI87082384, Length=294, Percent_Identity=24.4897959183673, Blast_Score=68, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=385, Percent_Identity=35.5844155844156, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17570075, Length=377, Percent_Identity=34.7480106100796, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17569725, Length=384, Percent_Identity=34.8958333333333, Blast_Score=201, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17506239, Length=357, Percent_Identity=34.1736694677871, Blast_Score=194, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=31.989247311828, Blast_Score=186, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71985184, Length=349, Percent_Identity=31.8051575931232, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17533517, Length=378, Percent_Identity=29.1005291005291, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI17538396, Length=390, Percent_Identity=32.0512820512821, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI32563615, Length=234, Percent_Identity=35.4700854700855, Blast_Score=138, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17534353, Length=384, Percent_Identity=27.8645833333333, Blast_Score=138, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17551932, Length=342, Percent_Identity=28.6549707602339, Blast_Score=137, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI71990804, Length=259, Percent_Identity=32.8185328185328, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17505929, Length=334, Percent_Identity=29.6407185628743, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71985192, Length=270, Percent_Identity=30.7407407407407, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982178, Length=277, Percent_Identity=29.6028880866426, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17562446, Length=353, Percent_Identity=26.9121813031161, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17531909, Length=231, Percent_Identity=29.8701298701299, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24660351, Length=384, Percent_Identity=37.2395833333333, Blast_Score=222, Evalue=3e-58,
Organism=Drosophila melanogaster, GI21356377, Length=379, Percent_Identity=33.509234828496, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI281363737, Length=371, Percent_Identity=31.8059299191375, Blast_Score=193, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24646207, Length=379, Percent_Identity=34.3007915567282, Blast_Score=184, Evalue=8e-47,
Organism=Drosophila melanogaster, GI24666513, Length=349, Percent_Identity=32.6647564469914, Blast_Score=177, Evalue=8e-45,
Organism=Drosophila melanogaster, GI21355753, Length=384, Percent_Identity=33.8541666666667, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI19920834, Length=370, Percent_Identity=28.1081081081081, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24652780, Length=284, Percent_Identity=25.7042253521127, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221473076, Length=271, Percent_Identity=26.1992619926199, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45550141, Length=271, Percent_Identity=26.1992619926199, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41572; Mature: 41441

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVSDEDFREILAQTRHFVRSAVVPRESEILAEDKVPDDLREAAKSMGLFGYAIPQEWG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHCCCEEEECCHHHC
GLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLVGFGTDEQKKQWLEGIASGDVV
CCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEE
ASFALTEPGAGSNPAGLRTKAVRDDAGDWVVNGQKRFITNAPTADLFVVFARTRPADDRG
EEEEECCCCCCCCCCCCEEHHHCCCCCCEEECCCEEEEECCCCCEEEEEEEECCCCCCCC
AGIAVFLVPADADGVEVGAKDAKMGQEGAWTADVNFTDVRVPASALVGGSEDIGYRAALI
CCEEEEEEECCCCCCCCCCCHHCCCCCCCEEECCCCEEEECCHHHHCCCCCCCCHHHHEE
TLARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAMLADQQTGVMAGRA
HHHCCCEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
LVRDAARKWVTDEDRRIAPSAAKVFCTEMAGQVADLAVQIHGGTGYMREVPVERIYRDVR
HHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHCCHHHHHHHHH
LLRLYEGTSEIQRLIIGGALVKAAQRTAANS
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEVSDEDFREILAQTRHFVRSAVVPRESEILAEDKVPDDLREAAKSMGLFGYAIPQEWG
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHCCCEEEECCHHHC
GLGLDLTQDVELAMEFGYTSLALRSMFGTNNGIAGQVLVGFGTDEQKKQWLEGIASGDVV
CCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEE
ASFALTEPGAGSNPAGLRTKAVRDDAGDWVVNGQKRFITNAPTADLFVVFARTRPADDRG
EEEEECCCCCCCCCCCCEEHHHCCCCCCEEECCCEEEEECCCCCEEEEEEEECCCCCCCC
AGIAVFLVPADADGVEVGAKDAKMGQEGAWTADVNFTDVRVPASALVGGSEDIGYRAALI
CCEEEEEEECCCCCCCCCCCHHCCCCCCCEEECCCCEEEECCHHHHCCCCCCCCHHHHEE
TLARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAMLADQQTGVMAGRA
HHHCCCEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
LVRDAARKWVTDEDRRIAPSAAKVFCTEMAGQVADLAVQIHGGTGYMREVPVERIYRDVR
HHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHCCHHHHHHHHH
LLRLYEGTSEIQRLIIGGALVKAAQRTAANS
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]