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The map label for this gene is ybbK [C]

Identifier: 119867554

GI number: 119867554

Start: 1621867

End: 1622757

Strand: Direct

Name: ybbK [C]

Synonym: Mkms_1506

Alternate gene names: 119867554

Gene position: 1621867-1622757 (Clockwise)

Preceding gene: 119867551

Following gene: 119867555

Centisome position: 28.27

GC content: 65.88

Gene sequence:

>891_bases
ATGATCACCCTCTACGCGGTGGCCGGCGTGGTTGCGCTGACCCTGCTCTGTCTCGTATCCAACGTGCGTGTGATCCAACA
GTTCGAACGCGGCGTGGTGTACCGGTTCGGGCAGGTGCAATCCCGGGTGCGCGAGCCCGGGCTGACACTGCTGGTCCCGG
TCGCTGACCGCCTGCAGAAGGTGAACATGCAGATCATCACGATGCCGGTACCCGCCCAGGACGGCATCACCCGCGACAAC
GTGACCGTCCGGGTGGATGCGGTCATCTACTTCAAGGTGGCCGATCCGGTGCGGGCGGCCGTCGACGTCCAGGACTACAT
GTCGGCCATCGGGCAGGTCGCGCAGACGTCGTTGAGGTCGATCATCGGCAAGAGCAACCTCGATGATCTGCTGTCCAATC
GGGAGCACCTCAACCAGGGCCTGGAGTTGATGATCGACAGCCCGGCGTTGGGCTGGGGAATTCACATCGACCGCGTCGAG
ATCAAAGACGTGGTTCTGCCCGACTCCATGAAGCGGTCGATCGCCCGGCAGGCCGAAGCCGAGCGGGAGCGACGGGCCAG
GGTCATCACCGCCGACGGCGAACTGCAGGCCTCGCAGAAGCTGGCCGCCGCGGCCGGCGTGATGTCCGAGCGACCCGCGG
CACTGCAACTGCGGCTGCTGCAGACCGTCGTGGAGGTGGCGGCGGAGAAGAATTCGACCCTGGTGCTGCCCTTCCCCGTC
GAATTGCTTCGCTTCCTGGAACGGTCGACGCCGCGGGCGCAGTGCGAGAGCGCGGCCGAGGATGACGTGTCGTGCTCGGA
TGCCGACGTTCAGGCTGCGCTGGCGGCGTCGCTTTCGGGCATATCGTCTGCGCTGACGCAGTCTCAACGTGAGGCCACAC
CGGCGACCTGA

Upstream 100 bases:

>100_bases
CGCCCGATGAGCGACCAATCCTGACAACGAACCCGTCGTGGAGAGCTCGCGGTCGCCGATGCCATGGCGCCGAGGCGGCG
TCGGGCGGAATGGAGTCATC

Downstream 100 bases:

>100_bases
CGGATCAGGCGCAAGTCCTGATGGCGCAATGGCGACCGCGCTGACTCTCGGCCAGGATGAGTCGTTCCGCGAGAGTGCCG
AGTGCAACGGACGTTATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MITLYAVAGVVALTLLCLVSNVRVIQQFERGVVYRFGQVQSRVREPGLTLLVPVADRLQKVNMQIITMPVPAQDGITRDN
VTVRVDAVIYFKVADPVRAAVDVQDYMSAIGQVAQTSLRSIIGKSNLDDLLSNREHLNQGLELMIDSPALGWGIHIDRVE
IKDVVLPDSMKRSIARQAEAERERRARVITADGELQASQKLAAAAGVMSERPAALQLRLLQTVVEVAAEKNSTLVLPFPV
ELLRFLERSTPRAQCESAAEDDVSCSDADVQAALAASLSGISSALTQSQREATPAT

Sequences:

>Translated_296_residues
MITLYAVAGVVALTLLCLVSNVRVIQQFERGVVYRFGQVQSRVREPGLTLLVPVADRLQKVNMQIITMPVPAQDGITRDN
VTVRVDAVIYFKVADPVRAAVDVQDYMSAIGQVAQTSLRSIIGKSNLDDLLSNREHLNQGLELMIDSPALGWGIHIDRVE
IKDVVLPDSMKRSIARQAEAERERRARVITADGELQASQKLAAAAGVMSERPAALQLRLLQTVVEVAAEKNSTLVLPFPV
ELLRFLERSTPRAQCESAAEDDVSCSDADVQAALAASLSGISSALTQSQREATPAT
>Mature_296_residues
MITLYAVAGVVALTLLCLVSNVRVIQQFERGVVYRFGQVQSRVREPGLTLLVPVADRLQKVNMQIITMPVPAQDGITRDN
VTVRVDAVIYFKVADPVRAAVDVQDYMSAIGQVAQTSLRSIIGKSNLDDLLSNREHLNQGLELMIDSPALGWGIHIDRVE
IKDVVLPDSMKRSIARQAEAERERRARVITADGELQASQKLAAAAGVMSERPAALQLRLLQTVVEVAAEKNSTLVLPFPV
ELLRFLERSTPRAQCESAAEDDVSCSDADVQAALAASLSGISSALTQSQREATPAT

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=224, Percent_Identity=42.4107142857143, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI21686995, Length=229, Percent_Identity=42.3580786026201, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI221316744, Length=229, Percent_Identity=42.3580786026201, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI7657615, Length=234, Percent_Identity=33.7606837606838, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI7305503, Length=173, Percent_Identity=41.6184971098266, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI20149563, Length=161, Percent_Identity=25.4658385093168, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI38016907, Length=58, Percent_Identity=55.1724137931034, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1786697, Length=189, Percent_Identity=34.9206349206349, Blast_Score=124, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17569497, Length=224, Percent_Identity=40.625, Blast_Score=197, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI193209764, Length=230, Percent_Identity=39.1304347826087, Blast_Score=190, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17569493, Length=222, Percent_Identity=40.0900900900901, Blast_Score=190, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI25153583, Length=235, Percent_Identity=41.2765957446808, Blast_Score=189, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71987612, Length=233, Percent_Identity=41.6309012875536, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71987621, Length=233, Percent_Identity=41.6309012875536, Blast_Score=187, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17570459, Length=236, Percent_Identity=39.4067796610169, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17569499, Length=235, Percent_Identity=37.4468085106383, Blast_Score=173, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI193210507, Length=229, Percent_Identity=40.6113537117904, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI17570161, Length=223, Percent_Identity=40.8071748878924, Blast_Score=170, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI71989948, Length=227, Percent_Identity=37.8854625550661, Blast_Score=164, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI32566490, Length=210, Percent_Identity=40.4761904761905, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI32564147, Length=176, Percent_Identity=37.5, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=38.0434782608696, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71989963, Length=120, Percent_Identity=35.8333333333333, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17542664, Length=157, Percent_Identity=33.7579617834395, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI18860517, Length=243, Percent_Identity=40.7407407407407, Blast_Score=196, Evalue=1e-50,
Organism=Drosophila melanogaster, GI45556022, Length=230, Percent_Identity=39.5652173913043, Blast_Score=183, Evalue=1e-46,
Organism=Drosophila melanogaster, GI62484448, Length=250, Percent_Identity=38, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24657857, Length=250, Percent_Identity=38, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI28573263, Length=249, Percent_Identity=36.9477911646586, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI281365664, Length=250, Percent_Identity=38, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI62484274, Length=251, Percent_Identity=37.8486055776892, Blast_Score=170, Evalue=9e-43,
Organism=Drosophila melanogaster, GI281361631, Length=242, Percent_Identity=33.4710743801653, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281361633, Length=242, Percent_Identity=33.4710743801653, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI21356845, Length=239, Percent_Identity=33.4728033472803, Blast_Score=158, Evalue=3e-39,
Organism=Drosophila melanogaster, GI281361635, Length=174, Percent_Identity=38.5057471264368, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI45550506, Length=182, Percent_Identity=39.010989010989, Blast_Score=131, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 32138; Mature: 32138

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLYAVAGVVALTLLCLVSNVRVIQQFERGVVYRFGQVQSRVREPGLTLLVPVADRLQK
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
VNMQIITMPVPAQDGITRDNVTVRVDAVIYFKVADPVRAAVDVQDYMSAIGQVAQTSLRS
CCEEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
IIGKSNLDDLLSNREHLNQGLELMIDSPALGWGIHIDRVEIKDVVLPDSMKRSIARQAEA
HHCCCCHHHHHHCHHHHCCCCEEEECCCCCCCCEEEEEEEECCEECCHHHHHHHHHHHHH
ERERRARVITADGELQASQKLAAAAGVMSERPAALQLRLLQTVVEVAAEKNSTLVLPFPV
HHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHH
ELLRFLERSTPRAQCESAAEDDVSCSDADVQAALAASLSGISSALTQSQREATPAT
HHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MITLYAVAGVVALTLLCLVSNVRVIQQFERGVVYRFGQVQSRVREPGLTLLVPVADRLQK
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
VNMQIITMPVPAQDGITRDNVTVRVDAVIYFKVADPVRAAVDVQDYMSAIGQVAQTSLRS
CCEEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
IIGKSNLDDLLSNREHLNQGLELMIDSPALGWGIHIDRVEIKDVVLPDSMKRSIARQAEA
HHCCCCHHHHHHCHHHHCCCCEEEECCCCCCCCEEEEEEEECCEECCHHHHHHHHHHHHH
ERERRARVITADGELQASQKLAAAAGVMSERPAALQLRLLQTVVEVAAEKNSTLVLPFPV
HHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHH
ELLRFLERSTPRAQCESAAEDDVSCSDADVQAALAASLSGISSALTQSQREATPAT
HHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]