| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is catA [H]
Identifier: 119867444
GI number: 119867444
Start: 1498107
End: 1498970
Strand: Direct
Name: catA [H]
Synonym: Mkms_1394
Alternate gene names: 119867444
Gene position: 1498107-1498970 (Clockwise)
Preceding gene: 119867443
Following gene: 119867445
Centisome position: 26.11
GC content: 68.75
Gene sequence:
>864_bases ATGACCACCTTCGACACCCCGGTTCCCACCGCCACCGCCGCGGCGTCCGGCGCCTCGGCCACCGACCGCTTCCGCGCCGA CAAGTCGCCCTACGACGCGGTCCGCGACACCCCGCGTGAGCGGGTCGACCTGCTGGCCCGTGAAGTGCTTACGGCCGTGC ACGAGACGGTCCGCAGGCACAAAGTCACCTACGACGAGTACAACGCGCTCAAGGCGTGGCTGATCGGCGTCGGTGAGGAC GGCGAATGGCCGCTGTTCCTCGACGTCTGGGTCGAGCATGCGGTCGAGGACGTGGCCACCTCCCACCGCAGCGGCAACCG CGGCAGCATCGAGGGCCCCTACTACGTGCCGAACTCGCCCGATCTCGGCGCGGACGGTGAGATGCCGATGCGCCCCGACG AGCAGGGCACCCCACTGGTGTGGAACGGCACGATCACCTCCACCGACGCCACACCACTGAACGGCAAGGTCGAGCTGTGG CACGCCGACGCGGACGGCTTCTATTCGCAGTTCGCCCCTGGCCTTCCGCAATGGAACCTGCGGGGCAGCTTCACGACCGG ACCCGACGGCGCTTTCCGCATCCGCACCATCCGTCCTGCGCCGTACCAGATCCCGACCGACGGTTCGTGCGGGAAGCTGA TCGCCGCTGCGGGGTGGCATGCCTGGCGACCGGCCCATCTGCACGTCAAGGTGTCCGCGCCCGGACACGAATTGCTCACC GCCCAGTTGTACTTCCCCGGGGATCCGCACAACGACGACGACATCGCCACCGCCGTCAAACCGGAACTCGTGTTGGCGCC GGTGCCGCAGCCCGACGGCAGCGAGGCCGTCGTCTACGACTTCGTCCTCGATCCGGTGCGCTGA
Upstream 100 bases:
>100_bases TCCCGCGGGCAACGGCCTGGGCATCGAGGTCGACCCGGACAAACTCGCCCGCTACCGCACCGACCACTGACATCAGCAAC CACCACCAAGGAGTACGACG
Downstream 100 bases:
>100_bases TGCTGTTCCACGTACGAATGGACGTGCGGATCCCGCACGACCTCGATCCGCAGGCGCGCATCGACCTGGTCTCCCGCGAG AAGGCCTATTCCCAGGAGTT
Product: catechol 1,2-dioxygenase
Products: NA
Alternate protein names: 1,2-CTD [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTTFDTPVPTATAAASGASATDRFRADKSPYDAVRDTPRERVDLLAREVLTAVHETVRRHKVTYDEYNALKAWLIGVGED GEWPLFLDVWVEHAVEDVATSHRSGNRGSIEGPYYVPNSPDLGADGEMPMRPDEQGTPLVWNGTITSTDATPLNGKVELW HADADGFYSQFAPGLPQWNLRGSFTTGPDGAFRIRTIRPAPYQIPTDGSCGKLIAAAGWHAWRPAHLHVKVSAPGHELLT AQLYFPGDPHNDDDIATAVKPELVLAPVPQPDGSEAVVYDFVLDPVR
Sequences:
>Translated_287_residues MTTFDTPVPTATAAASGASATDRFRADKSPYDAVRDTPRERVDLLAREVLTAVHETVRRHKVTYDEYNALKAWLIGVGED GEWPLFLDVWVEHAVEDVATSHRSGNRGSIEGPYYVPNSPDLGADGEMPMRPDEQGTPLVWNGTITSTDATPLNGKVELW HADADGFYSQFAPGLPQWNLRGSFTTGPDGAFRIRTIRPAPYQIPTDGSCGKLIAAAGWHAWRPAHLHVKVSAPGHELLT AQLYFPGDPHNDDDIATAVKPELVLAPVPQPDGSEAVVYDFVLDPVR >Mature_286_residues TTFDTPVPTATAAASGASATDRFRADKSPYDAVRDTPRERVDLLAREVLTAVHETVRRHKVTYDEYNALKAWLIGVGEDG EWPLFLDVWVEHAVEDVATSHRSGNRGSIEGPYYVPNSPDLGADGEMPMRPDEQGTPLVWNGTITSTDATPLNGKVELWH ADADGFYSQFAPGLPQWNLRGSFTTGPDGAFRIRTIRPAPYQIPTDGSCGKLIAAAGWHAWRPAHLHVKVSAPGHELLTA QLYFPGDPHNDDDIATAVKPELVLAPVPQPDGSEAVVYDFVLDPVR
Specific function: Unknown
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR012800 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.1 [H]
Molecular weight: Translated: 31329; Mature: 31198
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFDTPVPTATAAASGASATDRFRADKSPYDAVRDTPRERVDLLAREVLTAVHETVRRH CCCCCCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KVTYDEYNALKAWLIGVGEDGEWPLFLDVWVEHAVEDVATSHRSGNRGSIEGPYYVPNSP CCCHHHHHCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCC DLGADGEMPMRPDEQGTPLVWNGTITSTDATPLNGKVELWHADADGFYSQFAPGLPQWNL CCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCC RGSFTTGPDGAFRIRTIRPAPYQIPTDGSCGKLIAAAGWHAWRPAHLHVKVSAPGHELLT CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEE AQLYFPGDPHNDDDIATAVKPELVLAPVPQPDGSEAVVYDFVLDPVR EEEEECCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCC >Mature Secondary Structure TTFDTPVPTATAAASGASATDRFRADKSPYDAVRDTPRERVDLLAREVLTAVHETVRRH CCCCCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KVTYDEYNALKAWLIGVGEDGEWPLFLDVWVEHAVEDVATSHRSGNRGSIEGPYYVPNSP CCCHHHHHCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCC DLGADGEMPMRPDEQGTPLVWNGTITSTDATPLNGKVELWHADADGFYSQFAPGLPQWNL CCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCC RGSFTTGPDGAFRIRTIRPAPYQIPTDGSCGKLIAAAGWHAWRPAHLHVKVSAPGHELLT CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEE AQLYFPGDPHNDDDIATAVKPELVLAPVPQPDGSEAVVYDFVLDPVR EEEEECCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8990288 [H]