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The map label for this gene is desA3 [H]

Identifier: 119867427

GI number: 119867427

Start: 1477560

End: 1478801

Strand: Direct

Name: desA3 [H]

Synonym: Mkms_1377

Alternate gene names: 119867427

Gene position: 1477560-1478801 (Clockwise)

Preceding gene: 119867426

Following gene: 119867431

Centisome position: 25.75

GC content: 65.38

Gene sequence:

>1242_bases
ATGGCAATCACAGACGTACCTGAATTCGCACATCTCACCGACGCCGACATCGAGAGCCTGGGTGTCGAACTCGACGCGAT
CAGGCAAGACATCGAAGACTCCCTCGGCGAGCGTGACGCGCGCTATATCCGCCGCACCATCGCGGCGCAGCGGGCACTCG
AGGTGGCCGGCCGGTTGATGCTGGCCGCCAGTTCCCGACGGTCGGCCTGGTGGGCCGGCACCGCGACCCTGGGCGTGGCC
AAGATCGTCGAGAACATGGAGATCGGCCACAACGTCATGCACGGTCAGTGGGACTGGATGAACGATCCCGAGATCCACTC
CTCGACGTGGGAGTGGGACATGGGCGGGTCCTCCAAGCACTGGCGGTTCACCCACAACTTCATGCACCACAAGTACACCA
ACATCCTCGGGATGGACGACGACGTGGGCTACGGCCTGCTGCGCGTCACCCGCGATGCCAAGTGGAAGCCGTTCAACCTC
GGCAACCTGCTGTACAACGCCATTCTTGCCATCGGCTTCGAGTGGGGCGTCGGACTGCAGCACGTGGAGCTCGGCAAGAT
TTTCAAGGGCCGCGACAACCGGGACGAGAGCAAGATCCGGGCTCGCGAATTCGCCGCCAAGGCGGGTGCGCAGATCGCCA
AGGACTATGTCGCCTATCCCGCGCTGACCGCGCTGTCGCCGGGTGCCACCTTCCGGTCGACGGCGACCGCCAACGCGGTG
GCCAACGTCATCCGCAACGTGTGGTCCAACGCGGTGATCTTCTGCGGTCACTTCCCCGACGGTGCCGAGAAGTTCACCAA
GACCGACATGGTCGGCGAGTCCAAGGGGCAGTGGTACCTGCGTCAGATGCTGGGCAGCGCCAACTTCACCGGCGGCTGGC
TGCTGCGCTTCATGAGCGGCAACCTGTGCCACCAGATCGAGCATCACCTGTACCCGGACCTGCCCAGCAACCGGCTGCAC
GAGATCTCGTTCCGGGTGCAGCAGGTCTGCGACAAGTACGACCTGCCCTACACGACGGGTCCGTTCCTGGTGCAGTACGG
CAAGACCTGGCGCACCATCGCCAAGCTGTCGTTGCCGGACAAGTACCTGCGCGACACCCCCGACAACGCGCCCGAGACCC
GCAGTGAGCGGATGTTCGCCGATCTCGAGCCGACCGAGCGGCGCGGGTTGCGGTCGTCCATCGCCGCGGTGCGGGGCCGT
CGTCGCGAGAAGCGTGCACAGGCCGCGCTGCGCGCAGCCTGA

Upstream 100 bases:

>100_bases
CGGCCTCCGGCGATTGCGTTCTGGACGTTTAGTAGTTACCCACTGGTAACCTACGATCTCGTAGGTTACGCTACCGTAGG
TAGAGGAAGGAGGCGCCAAG

Downstream 100 bases:

>100_bases
TACCTCGAAACTGCGGGGAGATCACCATCCGGATCGGATGGACGATCTCCCCGCAGTTTCGTTCGGAGATGTCAGTCGGG
TATGTAGTCGAACGTGTCCG

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAITDVPEFAHLTDADIESLGVELDAIRQDIEDSLGERDARYIRRTIAAQRALEVAGRLMLAASSRRSAWWAGTATLGVA
KIVENMEIGHNVMHGQWDWMNDPEIHSSTWEWDMGGSSKHWRFTHNFMHHKYTNILGMDDDVGYGLLRVTRDAKWKPFNL
GNLLYNAILAIGFEWGVGLQHVELGKIFKGRDNRDESKIRAREFAAKAGAQIAKDYVAYPALTALSPGATFRSTATANAV
ANVIRNVWSNAVIFCGHFPDGAEKFTKTDMVGESKGQWYLRQMLGSANFTGGWLLRFMSGNLCHQIEHHLYPDLPSNRLH
EISFRVQQVCDKYDLPYTTGPFLVQYGKTWRTIAKLSLPDKYLRDTPDNAPETRSERMFADLEPTERRGLRSSIAAVRGR
RREKRAQAALRAA

Sequences:

>Translated_413_residues
MAITDVPEFAHLTDADIESLGVELDAIRQDIEDSLGERDARYIRRTIAAQRALEVAGRLMLAASSRRSAWWAGTATLGVA
KIVENMEIGHNVMHGQWDWMNDPEIHSSTWEWDMGGSSKHWRFTHNFMHHKYTNILGMDDDVGYGLLRVTRDAKWKPFNL
GNLLYNAILAIGFEWGVGLQHVELGKIFKGRDNRDESKIRAREFAAKAGAQIAKDYVAYPALTALSPGATFRSTATANAV
ANVIRNVWSNAVIFCGHFPDGAEKFTKTDMVGESKGQWYLRQMLGSANFTGGWLLRFMSGNLCHQIEHHLYPDLPSNRLH
EISFRVQQVCDKYDLPYTTGPFLVQYGKTWRTIAKLSLPDKYLRDTPDNAPETRSERMFADLEPTERRGLRSSIAAVRGR
RREKRAQAALRAA
>Mature_412_residues
AITDVPEFAHLTDADIESLGVELDAIRQDIEDSLGERDARYIRRTIAAQRALEVAGRLMLAASSRRSAWWAGTATLGVAK
IVENMEIGHNVMHGQWDWMNDPEIHSSTWEWDMGGSSKHWRFTHNFMHHKYTNILGMDDDVGYGLLRVTRDAKWKPFNLG
NLLYNAILAIGFEWGVGLQHVELGKIFKGRDNRDESKIRAREFAAKAGAQIAKDYVAYPALTALSPGATFRSTATANAVA
NVIRNVWSNAVIFCGHFPDGAEKFTKTDMVGESKGQWYLRQMLGSANFTGGWLLRFMSGNLCHQIEHHLYPDLPSNRLHE
ISFRVQQVCDKYDLPYTTGPFLVQYGKTWRTIAKLSLPDKYLRDTPDNAPETRSERMFADLEPTERRGLRSSIAAVRGRR
REKRAQAALRAA

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 46713; Mature: 46582

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITDVPEFAHLTDADIESLGVELDAIRQDIEDSLGERDARYIRRTIAAQRALEVAGRLM
CCCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASSRRSAWWAGTATLGVAKIVENMEIGHNVMHGQWDWMNDPEIHSSTWEWDMGGSSKH
HHCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WRFTHNFMHHKYTNILGMDDDVGYGLLRVTRDAKWKPFNLGNLLYNAILAIGFEWGVGLQ
EEEHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
HVELGKIFKGRDNRDESKIRAREFAAKAGAQIAKDYVAYPALTALSPGATFRSTATANAV
EEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ANVIRNVWSNAVIFCGHFPDGAEKFTKTDMVGESKGQWYLRQMLGSANFTGGWLLRFMSG
HHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCC
NLCHQIEHHLYPDLPSNRLHEISFRVQQVCDKYDLPYTTGPFLVQYGKTWRTIAKLSLPD
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCCH
KYLRDTPDNAPETRSERMFADLEPTERRGLRSSIAAVRGRRREKRAQAALRAA
HHHHCCCCCCCCCHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITDVPEFAHLTDADIESLGVELDAIRQDIEDSLGERDARYIRRTIAAQRALEVAGRLM
CCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASSRRSAWWAGTATLGVAKIVENMEIGHNVMHGQWDWMNDPEIHSSTWEWDMGGSSKH
HHCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WRFTHNFMHHKYTNILGMDDDVGYGLLRVTRDAKWKPFNLGNLLYNAILAIGFEWGVGLQ
EEEHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
HVELGKIFKGRDNRDESKIRAREFAAKAGAQIAKDYVAYPALTALSPGATFRSTATANAV
EEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ANVIRNVWSNAVIFCGHFPDGAEKFTKTDMVGESKGQWYLRQMLGSANFTGGWLLRFMSG
HHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCC
NLCHQIEHHLYPDLPSNRLHEISFRVQQVCDKYDLPYTTGPFLVQYGKTWRTIAKLSLPD
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCCH
KYLRDTPDNAPETRSERMFADLEPTERRGLRSSIAAVRGRRREKRAQAALRAA
HHHHCCCCCCCCCHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]