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The map label for this gene is alkB [H]

Identifier: 119867400

GI number: 119867400

Start: 1445266

End: 1446501

Strand: Direct

Name: alkB [H]

Synonym: Mkms_1350

Alternate gene names: 119867400

Gene position: 1445266-1446501 (Clockwise)

Preceding gene: 119867399

Following gene: 119867401

Centisome position: 25.19

GC content: 65.61

Gene sequence:

>1236_bases
GTGGCTGTGACCGCAGACCCGCAAACCGTCGACGTCGGCCAGTGGCGTGATCGCAAGCGCTACCTGTGGCTGATGGGCCT
GATCGCCCCGACCGCGTTGTTCGTGATGCTGCCGGTGGTGTGGGCGCTCAACCAGCAGGGGTGGCATGCGGCCGCCGCGG
TGCCGTTCTGGATCGGACCGATCCTGCTGTACCTCCTGTTGCCCGCCCTCGATCTGCGGTTCGGGCCCGACGGCCAGAAC
CCGCCCGACGAGGTGATGGAACGACTGGAGAACGACAAGTACTACCGCTACTGCACCTACCTCTACCTGCCGTTCCAGTA
CGCCAGCGTGGTCATGGGCGCCTACCTGTTCACCGCCTCCGATCTCGGGTGGTTGGGCTTCGACGGCGGACTGGGCTGGC
CGGCGAAGATCGGCCTGGCGCTCTCGGTCGGCCTGCTCGGCGGCGTCGGCATCAACACCGCACACGAACTGGGCCACAAG
AAGGATTCGCTGGAGCGCTGGCTGTCGAAGATCACGTTGGCGCAGACCTGGTACGGCCACTTCTACATCGAGCACAACCG
CGGCCACCACGTCCGCGTCGCGACGCCCGAGGACCCCGCATCGGCGCGGTTCGGTGAGACGTTCTGGGAGTTTCTGCCAC
GCAGCGTCTGGGGTTCACTCAAGTCGGCCTGGGAGCTGGAGGCCAAGAGGCTCGAGCGCAGCGGGCGGAGCCCGTGGAAT
CCGAAGACGTACTGGTCCAACGACGTCCTCAATGCGTGGGCGATGTCGGTGGTGTTCTACGGGGCACTGATCGCGGTGTT
CGGTTGGGCGCTGATTCCCTACATCGTCATCTCGGCGGTGTTCGGCTTCACGCTGCTCGAGACGGTCAACTACCTGGAGC
ACTACGGTCTGCTGCGCGCGAAGCTCGACAGCGGTCGCTACGAGCGGTGTGCACCGGTGCACAGCTGGAACTCCGACCAC
ATCGTGACCAATCTGTTCCTGTACCACCTGCAGCGGCACAGCGACCACCACGCCAACCCCACCCGGCGCTACCAGACGCT
GCGCAGCATGGAAGGCGCGCCGAACCTGCCGAGCGGGTATGCGTCGATGATCGCGCTGACCTACTTCCCGCCGCTGTGGC
GCCACGTGATGGATCACCGCGTGCTCGAGCACTACGACGGTGACATCACCAAGGTCAACATCCACCCGCGGGTGCGTGAC
AAGGTGCTCGCCCGATACGGCGGCGCGACGGTATGA

Upstream 100 bases:

>100_bases
TCACCGAGTGAGGCCGTTTTACAAAATGGCGTCTAGTGTCTAGACAGCGGACAAAACCACTCCTATAGTCAAGTCATCGT
CGTGATGACTTCACTAGGAG

Downstream 100 bases:

>100_bases
CCGCCTACCGCTGCCCGGGCTGTGACTACGTCTACGACGAAGCCAAAGGCGCTCCGCGGGAGGGTTTTCCGCCCGGGACG
CCGTGGGACGACATCCCCGA

Product: alkane 1-monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MAVTADPQTVDVGQWRDRKRYLWLMGLIAPTALFVMLPVVWALNQQGWHAAAAVPFWIGPILLYLLLPALDLRFGPDGQN
PPDEVMERLENDKYYRYCTYLYLPFQYASVVMGAYLFTASDLGWLGFDGGLGWPAKIGLALSVGLLGGVGINTAHELGHK
KDSLERWLSKITLAQTWYGHFYIEHNRGHHVRVATPEDPASARFGETFWEFLPRSVWGSLKSAWELEAKRLERSGRSPWN
PKTYWSNDVLNAWAMSVVFYGALIAVFGWALIPYIVISAVFGFTLLETVNYLEHYGLLRAKLDSGRYERCAPVHSWNSDH
IVTNLFLYHLQRHSDHHANPTRRYQTLRSMEGAPNLPSGYASMIALTYFPPLWRHVMDHRVLEHYDGDITKVNIHPRVRD
KVLARYGGATV

Sequences:

>Translated_411_residues
MAVTADPQTVDVGQWRDRKRYLWLMGLIAPTALFVMLPVVWALNQQGWHAAAAVPFWIGPILLYLLLPALDLRFGPDGQN
PPDEVMERLENDKYYRYCTYLYLPFQYASVVMGAYLFTASDLGWLGFDGGLGWPAKIGLALSVGLLGGVGINTAHELGHK
KDSLERWLSKITLAQTWYGHFYIEHNRGHHVRVATPEDPASARFGETFWEFLPRSVWGSLKSAWELEAKRLERSGRSPWN
PKTYWSNDVLNAWAMSVVFYGALIAVFGWALIPYIVISAVFGFTLLETVNYLEHYGLLRAKLDSGRYERCAPVHSWNSDH
IVTNLFLYHLQRHSDHHANPTRRYQTLRSMEGAPNLPSGYASMIALTYFPPLWRHVMDHRVLEHYDGDITKVNIHPRVRD
KVLARYGGATV
>Mature_410_residues
AVTADPQTVDVGQWRDRKRYLWLMGLIAPTALFVMLPVVWALNQQGWHAAAAVPFWIGPILLYLLLPALDLRFGPDGQNP
PDEVMERLENDKYYRYCTYLYLPFQYASVVMGAYLFTASDLGWLGFDGGLGWPAKIGLALSVGLLGGVGINTAHELGHKK
DSLERWLSKITLAQTWYGHFYIEHNRGHHVRVATPEDPASARFGETFWEFLPRSVWGSLKSAWELEAKRLERSGRSPWNP
KTYWSNDVLNAWAMSVVFYGALIAVFGWALIPYIVISAVFGFTLLETVNYLEHYGLLRAKLDSGRYERCAPVHSWNSDHI
VTNLFLYHLQRHSDHHANPTRRYQTLRSMEGAPNLPSGYASMIALTYFPPLWRHVMDHRVLEHYDGDITKVNIHPRVRDK
VLARYGGATV

Specific function: Catalyzes the hydroxylation of n-alkanes in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases long-chain-length alkanes with at least 12 carbon atoms [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 46916; Mature: 46785

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTADPQTVDVGQWRDRKRYLWLMGLIAPTALFVMLPVVWALNQQGWHAAAAVPFWIGP
CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ILLYLLLPALDLRFGPDGQNPPDEVMERLENDKYYRYCTYLYLPFQYASVVMGAYLFTAS
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHC
DLGWLGFDGGLGWPAKIGLALSVGLLGGVGINTAHELGHKKDSLERWLSKITLAQTWYGH
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHEEEEE
FYIEHNRGHHVRVATPEDPASARFGETFWEFLPRSVWGSLKSAWELEAKRLERSGRSPWN
EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PKTYWSNDVLNAWAMSVVFYGALIAVFGWALIPYIVISAVFGFTLLETVNYLEHYGLLRA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLDSGRYERCAPVHSWNSDHIVTNLFLYHLQRHSDHHANPTRRYQTLRSMEGAPNLPSGY
HHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHH
ASMIALTYFPPLWRHVMDHRVLEHYDGDITKVNIHPRVRDKVLARYGGATV
HHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AVTADPQTVDVGQWRDRKRYLWLMGLIAPTALFVMLPVVWALNQQGWHAAAAVPFWIGP
CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ILLYLLLPALDLRFGPDGQNPPDEVMERLENDKYYRYCTYLYLPFQYASVVMGAYLFTAS
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHC
DLGWLGFDGGLGWPAKIGLALSVGLLGGVGINTAHELGHKKDSLERWLSKITLAQTWYGH
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHEEEEE
FYIEHNRGHHVRVATPEDPASARFGETFWEFLPRSVWGSLKSAWELEAKRLERSGRSPWN
EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PKTYWSNDVLNAWAMSVVFYGALIAVFGWALIPYIVISAVFGFTLLETVNYLEHYGLLRA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLDSGRYERCAPVHSWNSDHIVTNLFLYHLQRHSDHHANPTRRYQTLRSMEGAPNLPSGY
HHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHH
ASMIALTYFPPLWRHVMDHRVLEHYDGDITKVNIHPRVRDKVLARYGGATV
HHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9546151 [H]