| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yceF [C]
Identifier: 119867359
GI number: 119867359
Start: 1401178
End: 1401810
Strand: Reverse
Name: yceF [C]
Synonym: Mkms_1309
Alternate gene names: 119867359
Gene position: 1401810-1401178 (Counterclockwise)
Preceding gene: 119867360
Following gene: 119867358
Centisome position: 24.43
GC content: 72.04
Gene sequence:
>633_bases GTGACCACCAGGGTCGTCCTGGGATCCGCCTCCTCTGGTCGGCTGAAAGTGTTGCGCCAGGCCGGAATCGAACCACTCGT CGTCGTCTCCGGGGTCGATGAGGATGCGATCGTCGCGGCCCTGGGTGCGGCGGCACCGCCTGATCAAGTGGTGTGCGCGC TGGCCGCGGCCAAGGCCGCGAGCGTCGTGGAGTCCCTACCGACCGAGGTCGCGACCGACTGCGTGGTCATCGGCTGCGAC TCGATGCTCCAGCTGGACGGCCGCCTGACCGGTAAGCCGGGAACGCCGGCGGCCGCGCGAGCACAGTGGCAGCAGATGGC GGGCCGCAGCGGCGAACTCTATACCGGCCACTGCCTGGTCCGGGTCCGCGACGGTGTCGCCGGGCGACGCGAGGTCGAGG CGGCCGCCACCACCGTCCGGTTCGGCACCCCGCCGCCCGCCGACCTGGCCGCCTACGTCGACAGCGGTGAACCCCTCGGT GTGGCAGGCGCTTTCACGCTCGACGGCCTCGGCGGCTGGTTCCTCGACGGCGTGGACGGCGACCCCTCCAACGTCATCGG GCTGAGCCTTCCGCTCGTGCGCCGCATGCTGGACCGGCTCGACCTGTCGGTCCCGGCGCTCTGGACGCGCTGA
Upstream 100 bases:
>100_bases CGCAGGAGTTCAACCCGTGGGGCCACCCGGCGGACAAGCTGCGTTACGACGTGACCAGCTGGCAGAGGGTGACGCTGCTG GAACGCACCCACATGCGCAG
Downstream 100 bases:
>100_bases CCAGGGACCCGCCGCACCCGCGTCCGGCGGTAGGCTCGTTTCCGTGCCGCTGCCACCTGATCCCAGCCCGAAACTCGCCG ACTACGCCCATCCGGAACGC
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTTRVVLGSASSGRLKVLRQAGIEPLVVVSGVDEDAIVAALGAAAPPDQVVCALAAAKAASVVESLPTEVATDCVVIGCD SMLQLDGRLTGKPGTPAAARAQWQQMAGRSGELYTGHCLVRVRDGVAGRREVEAAATTVRFGTPPPADLAAYVDSGEPLG VAGAFTLDGLGGWFLDGVDGDPSNVIGLSLPLVRRMLDRLDLSVPALWTR
Sequences:
>Translated_210_residues MTTRVVLGSASSGRLKVLRQAGIEPLVVVSGVDEDAIVAALGAAAPPDQVVCALAAAKAASVVESLPTEVATDCVVIGCD SMLQLDGRLTGKPGTPAAARAQWQQMAGRSGELYTGHCLVRVRDGVAGRREVEAAATTVRFGTPPPADLAAYVDSGEPLG VAGAFTLDGLGGWFLDGVDGDPSNVIGLSLPLVRRMLDRLDLSVPALWTR >Mature_209_residues TTRVVLGSASSGRLKVLRQAGIEPLVVVSGVDEDAIVAALGAAAPPDQVVCALAAAKAASVVESLPTEVATDCVVIGCDS MLQLDGRLTGKPGTPAAARAQWQQMAGRSGELYTGHCLVRVRDGVAGRREVEAAATTVRFGTPPPADLAAYVDSGEPLGV AGAFTLDGLGGWFLDGVDGDPSNVIGLSLPLVRRMLDRLDLSVPALWTR
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=206, Percent_Identity=31.5533980582524, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI87081830, Length=197, Percent_Identity=30.9644670050761, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789646, Length=202, Percent_Identity=28.7128712871287, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193202443, Length=194, Percent_Identity=31.4432989690722, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI78706856, Length=203, Percent_Identity=29.5566502463054, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1292_MYCSS (Q1BCI0)
Other databases:
- EMBL: CP000384 - RefSeq: YP_638460.1 - ProteinModelPortal: Q1BCI0 - SMR: Q1BCI0 - STRING: Q1BCI0 - EnsemblBacteria: EBMYCT00000062881 - GeneID: 4110129 - GenomeReviews: CP000384_GR - KEGG: mmc:Mmcs_1292 - eggNOG: COG0424 - GeneTree: EBGT00050000015014 - HOGENOM: HBG414045 - OMA: VVGCDSM - ProtClustDB: PRK00148 - BioCyc: MSP164756:MMCS_1292-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 21557; Mature: 21426
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: ACT_SITE 34-34
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRVVLGSASSGRLKVLRQAGIEPLVVVSGVDEDAIVAALGAAAPPDQVVCALAAAKAA CCCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHH SVVESLPTEVATDCVVIGCDSMLQLDGRLTGKPGTPAAARAQWQQMAGRSGELYTGHCLV HHHHHHHHHHHCCEEEECCCCCEEECCEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEE RVRDGVAGRREVEAAATTVRFGTPPPADLAAYVDSGEPLGVAGAFTLDGLGGWFLDGVDG EEECCCCCCHHHHHHHEEEECCCCCCHHHHHEECCCCCCCEEEEEEECCCCCEEECCCCC DPSNVIGLSLPLVRRMLDRLDLSVPALWTR CCCCEEEEHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure TTRVVLGSASSGRLKVLRQAGIEPLVVVSGVDEDAIVAALGAAAPPDQVVCALAAAKAA CCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHH SVVESLPTEVATDCVVIGCDSMLQLDGRLTGKPGTPAAARAQWQQMAGRSGELYTGHCLV HHHHHHHHHHHCCEEEECCCCCEEECCEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEE RVRDGVAGRREVEAAATTVRFGTPPPADLAAYVDSGEPLGVAGAFTLDGLGGWFLDGVDG EEECCCCCCHHHHHHHEEEECCCCCCHHHHHEECCCCCCCEEEEEEECCCCCEEECCCCC DPSNVIGLSLPLVRRMLDRLDLSVPALWTR CCCCEEEEHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA