| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867173
Identifier: 119867173
GI number: 119867173
Start: 1210422
End: 1211321
Strand: Direct
Name: 119867173
Synonym: Mkms_1122
Alternate gene names: NA
Gene position: 1210422-1211321 (Clockwise)
Preceding gene: 119867168
Following gene: 119867174
Centisome position: 21.1
GC content: 68.78
Gene sequence:
>900_bases ATGGCCGGTGGGTCGAACGACTCCGTCGGCGGCGCCGTCCGTCCCATAGCGTCGTCAATTGCGTTGACCAGAATTGGAGA TTCGATGGACACGACAGAGCTCGCTCGACCGGTCGTGGTGGGAGTGGACGGCTCGCAGGCGGCACTCGACGCGGTGAGGT GGGCGGTCGATGAGGCGGTCGGGCGCTCCGTGCCGTTGCGGCTGGTGCACGCGACCGGTGTGACGCCACGGGTCGACCAG TCGGACGACGAGTTCCGGCTCGAACGCGAGTATGCGGAGACGGCGCTTCGGGCGGCCTCCGCCGCGGCGCAGTCGGCCGG CCGGGAGGTCAAGGTCGAAACGGAGATCCTGTGGGGGTCACCGGACAGTGAGTTGGTCACCGAATCGCATGGGGCCTCGA TGGTCTGCATCGGATCGGTGGGCATCGGTGCGATCGCGAACGTGCTCCTGGGCTCCACCGCTGTCACCGTTTCGATGCAG GCGCAGTGTTGCGTCGCGGTGCTTCGTAGAGGCGCCCGCCCTGCGCCGAACGGCTCGGTGGCGGTCGCCACCGATGGCAC GCCGGACAGCGACGGCGTGGTCATCGGTGCGCTGGACGAGGCCCGGCTACGCGGTTGCCCGGTCGTGGTCGTGGGAGTTC GCCGCTGGGAATCGCACGCACCGAGTTACGACGAGTTGGACCGGCGCACAGCGCAATTGGCGGACCGCTATCCCGATGTG CGCACGAAGGTGGTGGCGACCGACGGCGGTATCGTGCGGTACCTCACCCATCAGCGCGACGACGACATCGAGATGGTCGT CGTCGGCAGTGCCGACGCGGACGCGGTGGCGGACATGGTCGGCCCGCACGACACGCTGTTCGGCCGCGACAAGGGGCACT CGGTGCTCGTGGTCCGCTGA
Upstream 100 bases:
>100_bases TATCGCCTCCTCGGTGATCCCTCGACCAGTCCTGACATTAGGACCTGGGGGCCCACCGCGCTGGGGGCGTTGGTCTGCAT CAGAGGGAGGACCAAAGACC
Downstream 100 bases:
>100_bases TGCCGGAACCGGTCGAGATCGGTCGGAACGAGTACCAGATGCCCATCACCGCAGAGCTTCTCGACGGCGGCGTGGTCACC CTCCGGCGGGTCGCCGACAC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: USP Rv2624c [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAGGSNDSVGGAVRPIASSIALTRIGDSMDTTELARPVVVGVDGSQAALDAVRWAVDEAVGRSVPLRLVHATGVTPRVDQ SDDEFRLEREYAETALRAASAAAQSAGREVKVETEILWGSPDSELVTESHGASMVCIGSVGIGAIANVLLGSTAVTVSMQ AQCCVAVLRRGARPAPNGSVAVATDGTPDSDGVVIGALDEARLRGCPVVVVGVRRWESHAPSYDELDRRTAQLADRYPDV RTKVVATDGGIVRYLTHQRDDDIEMVVVGSADADAVADMVGPHDTLFGRDKGHSVLVVR
Sequences:
>Translated_299_residues MAGGSNDSVGGAVRPIASSIALTRIGDSMDTTELARPVVVGVDGSQAALDAVRWAVDEAVGRSVPLRLVHATGVTPRVDQ SDDEFRLEREYAETALRAASAAAQSAGREVKVETEILWGSPDSELVTESHGASMVCIGSVGIGAIANVLLGSTAVTVSMQ AQCCVAVLRRGARPAPNGSVAVATDGTPDSDGVVIGALDEARLRGCPVVVVGVRRWESHAPSYDELDRRTAQLADRYPDV RTKVVATDGGIVRYLTHQRDDDIEMVVVGSADADAVADMVGPHDTLFGRDKGHSVLVVR >Mature_298_residues AGGSNDSVGGAVRPIASSIALTRIGDSMDTTELARPVVVGVDGSQAALDAVRWAVDEAVGRSVPLRLVHATGVTPRVDQS DDEFRLEREYAETALRAASAAAQSAGREVKVETEILWGSPDSELVTESHGASMVCIGSVGIGAIANVLLGSTAVTVSMQA QCCVAVLRRGARPAPNGSVAVATDGTPDSDGVVIGALDEARLRGCPVVVVGVRRWESHAPSYDELDRRTAQLADRYPDVR TKVVATDGGIVRYLTHQRDDDIEMVVVGSADADAVADMVGPHDTLFGRDKGHSVLVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 31232; Mature: 31101
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGSNDSVGGAVRPIASSIALTRIGDSMDTTELARPVVVGVDGSQAALDAVRWAVDEAV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHH GRSVPLRLVHATGVTPRVDQSDDEFRLEREYAETALRAASAAAQSAGREVKVETEILWGS CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECC PDSELVTESHGASMVCIGSVGIGAIANVLLGSTAVTVSMQAQCCVAVLRRGARPAPNGSV CCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCCE AVATDGTPDSDGVVIGALDEARLRGCPVVVVGVRRWESHAPSYDELDRRTAQLADRYPDV EEEECCCCCCCCEEEEECCHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCC RTKVVATDGGIVRYLTHQRDDDIEMVVVGSADADAVADMVGPHDTLFGRDKGHSVLVVR EEEEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHCCCCHHCCCCCCCCEEEEEC >Mature Secondary Structure AGGSNDSVGGAVRPIASSIALTRIGDSMDTTELARPVVVGVDGSQAALDAVRWAVDEAV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHH GRSVPLRLVHATGVTPRVDQSDDEFRLEREYAETALRAASAAAQSAGREVKVETEILWGS CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECC PDSELVTESHGASMVCIGSVGIGAIANVLLGSTAVTVSMQAQCCVAVLRRGARPAPNGSV CCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCCE AVATDGTPDSDGVVIGALDEARLRGCPVVVVGVRRWESHAPSYDELDRRTAQLADRYPDV EEEECCCCCCCCEEEEECCHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCC RTKVVATDGGIVRYLTHQRDDDIEMVVVGSADADAVADMVGPHDTLFGRDKGHSVLVVR EEEEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHCCCCHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]