| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ucpA [C]
Identifier: 119866386
GI number: 119866386
Start: 367421
End: 368221
Strand: Direct
Name: ucpA [C]
Synonym: Mkms_0331
Alternate gene names: 119866386
Gene position: 367421-368221 (Clockwise)
Preceding gene: 119866385
Following gene: 119866387
Centisome position: 6.4
GC content: 69.91
Gene sequence:
>801_bases ATGCCGCGCCTCCTCGACAAGGTGGTCGTGGTGACCGGGGCGGCCCGGGGGACCGGCCGGGTGCACTGCGAGCGGTTCGC CGAGGAAGGCGCCGACGTCATCGCGCTCGACGTCGCGGCGGTGGCCGACGAGCTGTCGGGAACGGCGGCCGCAGTGGCAC GACACGGCCGACGGTGTGTGACGGGAGAGGCCGACGTGCGTGACTTCGCCGCCTTGACGGCCGCGATCGATCGCGGGGTC GAGGAGCTCGGTCGGCTCGACGTCGTCGTGGCGAATGCGGGCGTCCACCCGGCTGGTGCGCCGGCCTGGGAACTGACGGG CGAGGCCTGGCGGCAAGCACTCGACGTCAACGTGACCGGTGTATGGCATACGGTCAAAGCAGCTGCGCGGCACATGGATT CAGGTGGTGGGGCGGTGATCGTCATCAGCTCCACGAATGGCCTGCGCGGGACCCCGAACTCCGCGCACTACACCACGAGC AAGCACGCCGTGGTCGGGTTGGCCCGGACCCTGGCCAACGAACTGGGTCCCCGCAGCATCCGGGTCAACACAGTCCACCC GGGCGCCGTCGCGACGCCGATGGTGCTCAACGAAGCCACCTTCAGACGGTTACGCCCGGACCTCGAAGAACCCACCGCCG ACGACGCCGCGGAGGTGCTCCGAGCGCGGAACCTCCTTCCGGTGCCGTGGGTCGATCCGGTCGACGTCGCCAACGCGGTG GTGTTCCTCGCCTCAGACGAGGCGCGCTACATCACCGGCTCACAGCTCGTCGTCGACGCGGGCCTGACGCAGAAGGTATG A
Upstream 100 bases:
>100_bases TGTTCATGCTCTTCATCGGGGGGTTCGGGGTCTACCTCGACATCTGCGCCGAGGTCGCTGACGCCGGGTACAAGGGCTTC GAACTGCTGAAGATCGATTG
Downstream 100 bases:
>100_bases CAGTGGGACGTCTGGCCGGCAAGGTGGCGCTGATCACCGGAGCGGCACGCGGCATCGGCCGAGCGCAGGCCGTGCGCTTC GCGCAAGAGGGGGCGGACAT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPRLLDKVVVVTGAARGTGRVHCERFAEEGADVIALDVAAVADELSGTAAAVARHGRRCVTGEADVRDFAALTAAIDRGV EELGRLDVVVANAGVHPAGAPAWELTGEAWRQALDVNVTGVWHTVKAAARHMDSGGGAVIVISSTNGLRGTPNSAHYTTS KHAVVGLARTLANELGPRSIRVNTVHPGAVATPMVLNEATFRRLRPDLEEPTADDAAEVLRARNLLPVPWVDPVDVANAV VFLASDEARYITGSQLVVDAGLTQKV
Sequences:
>Translated_266_residues MPRLLDKVVVVTGAARGTGRVHCERFAEEGADVIALDVAAVADELSGTAAAVARHGRRCVTGEADVRDFAALTAAIDRGV EELGRLDVVVANAGVHPAGAPAWELTGEAWRQALDVNVTGVWHTVKAAARHMDSGGGAVIVISSTNGLRGTPNSAHYTTS KHAVVGLARTLANELGPRSIRVNTVHPGAVATPMVLNEATFRRLRPDLEEPTADDAAEVLRARNLLPVPWVDPVDVANAV VFLASDEARYITGSQLVVDAGLTQKV >Mature_265_residues PRLLDKVVVVTGAARGTGRVHCERFAEEGADVIALDVAAVADELSGTAAAVARHGRRCVTGEADVRDFAALTAAIDRGVE ELGRLDVVVANAGVHPAGAPAWELTGEAWRQALDVNVTGVWHTVKAAARHMDSGGGAVIVISSTNGLRGTPNSAHYTTSK HAVVGLARTLANELGPRSIRVNTVHPGAVATPMVLNEATFRRLRPDLEEPTADDAAEVLRARNLLPVPWVDPVDVANAVV FLASDEARYITGSQLVVDAGLTQKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=264, Percent_Identity=34.0909090909091, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI10190704, Length=267, Percent_Identity=31.0861423220974, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI40254992, Length=259, Percent_Identity=33.5907335907336, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI15277342, Length=268, Percent_Identity=33.2089552238806, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI126723750, Length=268, Percent_Identity=29.4776119402985, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI59889578, Length=244, Percent_Identity=31.5573770491803, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=33.8624338624339, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI5031737, Length=272, Percent_Identity=28.6764705882353, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI4758504, Length=201, Percent_Identity=32.3383084577114, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI7705925, Length=257, Percent_Identity=31.1284046692607, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI66933014, Length=264, Percent_Identity=31.0606060606061, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI31542939, Length=248, Percent_Identity=27.4193548387097, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=32.9896907216495, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI302344755, Length=104, Percent_Identity=40.3846153846154, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4504505, Length=219, Percent_Identity=31.0502283105023, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI19923817, Length=269, Percent_Identity=24.907063197026, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI83715985, Length=183, Percent_Identity=31.1475409836066, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI223718074, Length=192, Percent_Identity=33.8541666666667, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI210032110, Length=211, Percent_Identity=30.3317535545024, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI87082100, Length=269, Percent_Identity=36.8029739776952, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=32.1705426356589, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788459, Length=259, Percent_Identity=31.6602316602317, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787335, Length=265, Percent_Identity=31.3207547169811, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787905, Length=267, Percent_Identity=29.2134831460674, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790717, Length=260, Percent_Identity=28.4615384615385, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082160, Length=260, Percent_Identity=28.0769230769231, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786812, Length=266, Percent_Identity=30.0751879699248, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=26, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1788891, Length=269, Percent_Identity=30.1115241635688, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI2367365, Length=264, Percent_Identity=29.9242424242424, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI2367175, Length=256, Percent_Identity=29.296875, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787526, Length=259, Percent_Identity=27.027027027027, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17560676, Length=271, Percent_Identity=28.7822878228782, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17561402, Length=270, Percent_Identity=30, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17555706, Length=261, Percent_Identity=29.1187739463602, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17559104, Length=275, Percent_Identity=31.6363636363636, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=29.6875, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI25147288, Length=271, Percent_Identity=28.0442804428044, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17562904, Length=273, Percent_Identity=27.8388278388278, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17544670, Length=276, Percent_Identity=25.7246376811594, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17531453, Length=279, Percent_Identity=27.9569892473118, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193204405, Length=274, Percent_Identity=27.007299270073, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI115534694, Length=266, Percent_Identity=31.203007518797, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560332, Length=278, Percent_Identity=29.8561151079137, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71994600, Length=258, Percent_Identity=27.906976744186, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560150, Length=271, Percent_Identity=27.6752767527675, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562906, Length=273, Percent_Identity=27.8388278388278, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=26.7657992565056, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17562908, Length=280, Percent_Identity=26.7857142857143, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562990, Length=271, Percent_Identity=26.5682656826568, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17551412, Length=280, Percent_Identity=27.8571428571429, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=27.1375464684015, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17568967, Length=221, Percent_Identity=28.0542986425339, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17538182, Length=209, Percent_Identity=33.0143540669856, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17562910, Length=274, Percent_Identity=25.5474452554745, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17567345, Length=206, Percent_Identity=27.6699029126214, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=25.7462686567164, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17565030, Length=272, Percent_Identity=26.8382352941176, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17564282, Length=234, Percent_Identity=26.0683760683761, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17538486, Length=274, Percent_Identity=25.5474452554745, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193203115, Length=239, Percent_Identity=26.3598326359833, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193203117, Length=239, Percent_Identity=26.3598326359833, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17508895, Length=202, Percent_Identity=27.2277227722772, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17560220, Length=274, Percent_Identity=25.5474452554745, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534660, Length=203, Percent_Identity=25.615763546798, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193210355, Length=193, Percent_Identity=27.979274611399, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=267, Percent_Identity=28.0898876404494, Blast_Score=98, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6322861, Length=220, Percent_Identity=31.3636363636364, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322226, Length=193, Percent_Identity=27.979274611399, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357041, Length=262, Percent_Identity=30.5343511450382, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI21355319, Length=276, Percent_Identity=28.2608695652174, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI23397609, Length=264, Percent_Identity=32.5757575757576, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI28571526, Length=267, Percent_Identity=30.3370786516854, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24644339, Length=262, Percent_Identity=30.9160305343511, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24644337, Length=183, Percent_Identity=32.2404371584699, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI18859837, Length=213, Percent_Identity=30.9859154929577, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17737361, Length=204, Percent_Identity=29.9019607843137, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24643142, Length=264, Percent_Identity=27.6515151515151, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24581726, Length=217, Percent_Identity=27.1889400921659, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24639444, Length=265, Percent_Identity=26.7924528301887, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI281364892, Length=191, Percent_Identity=30.3664921465969, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24641388, Length=238, Percent_Identity=31.5126050420168, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 27874; Mature: 27743
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLLDKVVVVTGAARGTGRVHCERFAEEGADVIALDVAAVADELSGTAAAVARHGRRCV CCHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHCCCEEE TGEADVRDFAALTAAIDRGVEELGRLDVVVANAGVHPAGAPAWELTGEAWRQALDVNVTG CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHCCCEEH VWHTVKAAARHMDSGGGAVIVISSTNGLRGTPNSAHYTTSKHAVVGLARTLANELGPRSI HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCEE RVNTVHPGAVATPMVLNEATFRRLRPDLEEPTADDAAEVLRARNLLPVPWVDPVDVANAV EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCEE VFLASDEARYITGSQLVVDAGLTQKV EEEECCCCEEEECCEEEEECCCCCCC >Mature Secondary Structure PRLLDKVVVVTGAARGTGRVHCERFAEEGADVIALDVAAVADELSGTAAAVARHGRRCV CHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHCCCEEE TGEADVRDFAALTAAIDRGVEELGRLDVVVANAGVHPAGAPAWELTGEAWRQALDVNVTG CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHCCCEEH VWHTVKAAARHMDSGGGAVIVISSTNGLRGTPNSAHYTTSKHAVVGLARTLANELGPRSI HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCEE RVNTVHPGAVATPMVLNEATFRRLRPDLEEPTADDAAEVLRARNLLPVPWVDPVDVANAV EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCEE VFLASDEARYITGSQLVVDAGLTQKV EEEECCCCEEEECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA