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The map label for this gene is mmpS5 [H]

Identifier: 119855385

GI number: 119855385

Start: 201541

End: 201984

Strand: Reverse

Name: mmpS5 [H]

Synonym: Mkms_6001

Alternate gene names: 119855385

Gene position: 201984-201541 (Counterclockwise)

Preceding gene: 119855390

Following gene: 119855384

Centisome position: 93.18

GC content: 60.59

Gene sequence:

>444_bases
GTGAACCAACGTTCAGTGGTCAGGGCGGCTTTGGCGAGGACCTGGCTTCCGTTGACTGCCGCGATTGTGGTCGGTGTGGG
CGGGTTGGGTATGTGGAAGGTGCACCAATCGTCTGCGCCGGGTCCTGTCATCGCCGTGAATGGTCCGCAAGCGCCAGAGC
AGTTCACTCCTAAGCAGCTCACCTATGAGTTGGACGGCACGCTCGGCGGTGGCGGGATGTTGTCCTATGTCGACATCGAT
GGTCATCCGCACACGGTTCAGCTCACGGAGTTGCCGTGGTCGCATACCGAGACCACCACGCTGACCGTGGTGTCCGGCAG
TATCTCTGCGCAGGTCCAAGGAGGTGAGGTCGGCTGCCGGATACTGGTCAACGGCGTTGTGCACGATGAACAATCGGCTA
CTCGTCAAGATGCCGATGTGACCTGCCGGGTGAAGTCTGCATGA

Upstream 100 bases:

>100_bases
CAACTCAACCAGCCTGAGTGTTGCGGACCGCGACCTCGGAGCCCGCCGTAGACATCTGCGAAAGTGCGAAAGGTATTGCG
GTGATGGGCGGGGTGGTGGC

Downstream 100 bases:

>100_bases
GTTCCCATCGCGCCAAGCGTCCGTTCATCGCGAGCACGGTCCGACTCCTGGCGGTTCCGATTGTCGTGTTCTGGGCGTTG
CTCGCCGTGTCGACGAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNQRSVVRAALARTWLPLTAAIVVGVGGLGMWKVHQSSAPGPVIAVNGPQAPEQFTPKQLTYELDGTLGGGGMLSYVDID
GHPHTVQLTELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNGVVHDEQSATRQDADVTCRVKSA

Sequences:

>Translated_147_residues
MNQRSVVRAALARTWLPLTAAIVVGVGGLGMWKVHQSSAPGPVIAVNGPQAPEQFTPKQLTYELDGTLGGGGMLSYVDID
GHPHTVQLTELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNGVVHDEQSATRQDADVTCRVKSA
>Mature_147_residues
MNQRSVVRAALARTWLPLTAAIVVGVGGLGMWKVHQSSAPGPVIAVNGPQAPEQFTPKQLTYELDGTLGGGGMLSYVDID
GHPHTVQLTELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNGVVHDEQSATRQDADVTCRVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 15440; Mature: 15440

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRSVVRAALARTWLPLTAAIVVGVGGLGMWKVHQSSAPGPVIAVNGPQAPEQFTPKQL
CCHHHHHHHHHHHHHHHHHEEEHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEE
TYELDGTLGGGGMLSYVDIDGHPHTVQLTELPWSHTETTTLTVVSGSISAQVQGGEVGCR
EEEECCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEECCCEEEE
ILVNGVVHDEQSATRQDADVTCRVKSA
EEEEEEEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNQRSVVRAALARTWLPLTAAIVVGVGGLGMWKVHQSSAPGPVIAVNGPQAPEQFTPKQL
CCHHHHHHHHHHHHHHHHHEEEHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEE
TYELDGTLGGGGMLSYVDIDGHPHTVQLTELPWSHTETTTLTVVSGSISAQVQGGEVGCR
EEEECCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEECCCEEEE
ILVNGVVHDEQSATRQDADVTCRVKSA
EEEEEEEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]