Definition Mycobacterium sp. KMS plasmid pMKMS01, complete sequence.
Accession NC_008703
Length 302,089

Click here to switch to the map view.

The map label for this gene is 119855044

Identifier: 119855044

GI number: 119855044

Start: 164202

End: 164516

Strand: Reverse

Name: 119855044

Synonym: Mkms_5654

Alternate gene names: NA

Gene position: 164516-164202 (Counterclockwise)

Preceding gene: 119855046

Following gene: 119855043

Centisome position: 54.46

GC content: 63.81

Gene sequence:

>315_bases
ATGCCGAGCAAGTACGACCCGGAGACCCGAGCGAAGGCGGTCCGTCTGGTGCGCGAGCACCGGGAGGACTATCCGAGCGA
GTGGGCGGCGATTACCGCGGTGTCCAAACGGTTGGGGATGAACGCCGAGACGCTGCGTAATTGGATTCGCCAGCAACAGG
TCGATGACGGTGATCGAGACGGGGTCTCTTCGGAGGCGGCTGCGGAGATCCGGGCGTTGAAACGGCGTAACGCCGAGCTG
GAGCAGACTATCGAAATCCTCAAGGCGGCAACGTCTTTCTTCGTGCGGGAGAGCGACCCGCGCAACCGCCGCTGA

Upstream 100 bases:

>100_bases
GCCGTACTGGGCAATCCAGCGGTGCCAGGTCGACTCGGTGATCTCCAGGTGAACCATCCCGCGTTTGATGCGCACCTCCT
TCCTTGGGAAGGTGCATGTC

Downstream 100 bases:

>100_bases
CCGCTACGGTCTGCGAGTTCATCGCCGCCCACCGGGACCGTTTCGGGGTCGCTCCGATCTGCCGCGTGCTCACCGAGCAC
GCCGTGCCGATCGCCCCGCG

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MPSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAEL
EQTIEILKAATSFFVRESDPRNRR

Sequences:

>Translated_104_residues
MPSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAEL
EQTIEILKAATSFFVRESDPRNRR
>Mature_103_residues
PSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAELE
QTIEILKAATSFFVRESDPRNRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 12028; Mature: 11896

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRD
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
GVSSEAAAEIRALKRRNAELEQTIEILKAATSFFVRESDPRNRR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRD
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
GVSSEAAAEIRALKRRNAELEQTIEILKAATSFFVRESDPRNRR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]