| Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
|---|---|
| Accession | NC_008703 |
| Length | 302,089 |
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The map label for this gene is 119855044
Identifier: 119855044
GI number: 119855044
Start: 164202
End: 164516
Strand: Reverse
Name: 119855044
Synonym: Mkms_5654
Alternate gene names: NA
Gene position: 164516-164202 (Counterclockwise)
Preceding gene: 119855046
Following gene: 119855043
Centisome position: 54.46
GC content: 63.81
Gene sequence:
>315_bases ATGCCGAGCAAGTACGACCCGGAGACCCGAGCGAAGGCGGTCCGTCTGGTGCGCGAGCACCGGGAGGACTATCCGAGCGA GTGGGCGGCGATTACCGCGGTGTCCAAACGGTTGGGGATGAACGCCGAGACGCTGCGTAATTGGATTCGCCAGCAACAGG TCGATGACGGTGATCGAGACGGGGTCTCTTCGGAGGCGGCTGCGGAGATCCGGGCGTTGAAACGGCGTAACGCCGAGCTG GAGCAGACTATCGAAATCCTCAAGGCGGCAACGTCTTTCTTCGTGCGGGAGAGCGACCCGCGCAACCGCCGCTGA
Upstream 100 bases:
>100_bases GCCGTACTGGGCAATCCAGCGGTGCCAGGTCGACTCGGTGATCTCCAGGTGAACCATCCCGCGTTTGATGCGCACCTCCT TCCTTGGGAAGGTGCATGTC
Downstream 100 bases:
>100_bases CCGCTACGGTCTGCGAGTTCATCGCCGCCCACCGGGACCGTTTCGGGGTCGCTCCGATCTGCCGCGTGCTCACCGAGCAC GCCGTGCCGATCGCCCCGCG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MPSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAEL EQTIEILKAATSFFVRESDPRNRR
Sequences:
>Translated_104_residues MPSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAEL EQTIEILKAATSFFVRESDPRNRR >Mature_103_residues PSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAELE QTIEILKAATSFFVRESDPRNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 12028; Mature: 11896
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRD CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC GVSSEAAAEIRALKRRNAELEQTIEILKAATSFFVRESDPRNRR CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PSKYDPETRAKAVRLVREHREDYPSEWAAITAVSKRLGMNAETLRNWIRQQQVDDGDRD CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC GVSSEAAAEIRALKRRNAELEQTIEILKAATSFFVRESDPRNRR CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]