| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776768
Identifier: 119776768
GI number: 119776768
Start: 4285619
End: 4285816
Strand: Direct
Name: 119776768
Synonym: Sama_3636
Alternate gene names: NA
Gene position: 4285619-4285816 (Clockwise)
Preceding gene: 119776767
Following gene: NA
Centisome position: 99.52
GC content: 50.51
Gene sequence:
>198_bases ATGTTAAAGACCATGACCTTTGCCGTGCTGCACTTTGGTGTGGCCTTCAGCATCACGTATTTACTCACCGGCAGCCTGCT TATCGGGGGCGCTGTCGCCCTGATTGAGCCAACCATAAATACCGTGGTGTTCTACTTCCATGAAAAAGTCTGGAAGCGCA TAGAGGCAAAAAAGCAGCTACCACAACTACTCGCCTGA
Upstream 100 bases:
>100_bases CTTAATCGGCTGCCTCGTTTACCTCAATTGAACAATTCTACTTTACACGTAAGTGATAACTATTATCATTTATGAAAAGT AATCAATTGGGGATTCCACC
Downstream 100 bases:
>100_bases CCTCTAAGGCTAGTAGCACTCAGCTCAGGTTCTCCTCGCACTATCTCTAATTGCCCATCCCCATATTGATGACCGGAGGC TCAGTCTGACTACCTGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQLPQLLA
Sequences:
>Translated_65_residues MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQLPQLLA >Mature_65_residues MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQLPQLLA
Specific function: Unknown
COG id: COG3205
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7280; Mature: 7280
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH PQLLA HHHCC >Mature Secondary Structure MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH PQLLA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA