| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776754
Identifier: 119776754
GI number: 119776754
Start: 4262083
End: 4262484
Strand: Reverse
Name: 119776754
Synonym: Sama_3622
Alternate gene names: NA
Gene position: 4262484-4262083 (Counterclockwise)
Preceding gene: 119776756
Following gene: 119776753
Centisome position: 98.99
GC content: 48.01
Gene sequence:
>402_bases ATGAAGTACTTACTCACTCTGGTATTGCTGGTGATGTCTCTTGGTATGCCCGCCTGGGCAGAAGAGGAAAAAAAACTGGA AGAATATGCCTATTACGGCTTTGAGCCGGAAATAGTCACCAACTATATTTCCAACCGCAAAAAACTGGGCTTCGTGCGCA TCAGCGTGGAGCTGATGGTGAAAAATCCCGATGACCTCATTCAAATTGAGCGTCACGACCCACTGCTCAGGGCGGCCATT ATCGAAATTCTCGGTAACCAGCCGGAAGAGAAAATAAAGTCACTCACGGGCCGTGAAGAAATTCGCCGTGAATGCTATGC CGCCGTCAACCGACTCATCGAAGGTGAAACGGGCAAAGCACTGATAGTAAACCTGCTTTTTACCCGATACCTGTACGATT AA
Upstream 100 bases:
>100_bases CTACAATAGAAAATTACAACGGGCCAAGTCTATCATGTTGATGTGGCGGTCGATAGTTGCTGACCTGAGGCTTATTCGTC CATAAGGAGTTCTGGTTTCG
Downstream 100 bases:
>100_bases AGGCCAAAGGCGGCGCCGGATGGCGCCGTTTTTCTCTGCTATGACCTCAAAAAAACAATCCCAGGGGCTGCCTAAGGGGC CGCATCCTGACAATGCCCAT
Product: flagellar basal body-associated protein FliL-like protein
Products: NA
Alternate protein names: Flagellar Basal Body-Associated Protein FliL; Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKYLLTLVLLVMSLGMPAWAEEEKKLEEYAYYGFEPEIVTNYISNRKKLGFVRISVELMVKNPDDLIQIERHDPLLRAAI IEILGNQPEEKIKSLTGREEIRRECYAAVNRLIEGETGKALIVNLLFTRYLYD
Sequences:
>Translated_133_residues MKYLLTLVLLVMSLGMPAWAEEEKKLEEYAYYGFEPEIVTNYISNRKKLGFVRISVELMVKNPDDLIQIERHDPLLRAAI IEILGNQPEEKIKSLTGREEIRRECYAAVNRLIEGETGKALIVNLLFTRYLYD >Mature_133_residues MKYLLTLVLLVMSLGMPAWAEEEKKLEEYAYYGFEPEIVTNYISNRKKLGFVRISVELMVKNPDDLIQIERHDPLLRAAI IEILGNQPEEKIKSLTGREEIRRECYAAVNRLIEGETGKALIVNLLFTRYLYD
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15480; Mature: 15480
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLLTLVLLVMSLGMPAWAEEEKKLEEYAYYGFEPEIVTNYISNRKKLGFVRISVELMV CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHCEEEEEEEEEEE KNPDDLIQIERHDPLLRAAIIEILGNQPEEKIKSLTGREEIRRECYAAVNRLIEGETGKA ECCCHHEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH LIVNLLFTRYLYD HHHHHHHHHHHCC >Mature Secondary Structure MKYLLTLVLLVMSLGMPAWAEEEKKLEEYAYYGFEPEIVTNYISNRKKLGFVRISVELMV CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHCEEEEEEEEEEE KNPDDLIQIERHDPLLRAAIIEILGNQPEEKIKSLTGREEIRRECYAAVNRLIEGETGKA ECCCHHEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH LIVNLLFTRYLYD HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA