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The map label for this gene is 119776748

Identifier: 119776748

GI number: 119776748

Start: 4256169

End: 4257911

Strand: Reverse

Name: 119776748

Synonym: Sama_3616

Alternate gene names: NA

Gene position: 4257911-4256169 (Counterclockwise)

Preceding gene: 119776749

Following gene: 119776747

Centisome position: 98.88

GC content: 56.51

Gene sequence:

>1743_bases
TTGCGCAAAATAAACAGAAAAACACCGACCCTTACGTACAGAAACAGCCAAAGAACTGTTCAGGAACGCAACGTGAGCAT
GATAGAGACAACACGCAGGGCCAGACACGCGGATATCCGCAGTCAGGTATTGGCACAAACCCGGATCCTCGGGAACCTGA
TCCCACCCACGGTGAGTTATTCCACCGAGGGACATGTCCTTATTCTCGGCGCAGAGGACTTGGCCCGTCTGGCCGCAGGC
AAGCTGTCTGCCATGGCGAGCCTGGTGATTCTGGCCACCGACGATATTTCCAGTCAGGATGAAGCGCACCTCGAGCGGGT
GATGAATGCCGCCCCCGATGTCGAGAGTTATTACAACAAGCTGGTGTCCATCAAGGGCTTTCTTGGTCAGTTTCAGGCTA
CGGTGGAGCAAAATGGCACCCAGGCCCAGTTGTCTACCGTGGCGATTCGCCGCCCCCATTTCGACATAGTGCTTGATCTG
TCCATTGAGCCTGCCATTCAGCTGGAACTGCTGCCACCCGGCTATTTTCATGTTGGGCAGGACGAAGCCAAACTGGCTGA
TGCGGTGGCGCAAATTCCCGATTTGGTCGGCCAGTTCGACAAACCCCGCTATGTGAAGGTGAATGCCGACCTGTGCGCCC
ACAACCGCAATGGGCTCAATGGTTGCAACCGCTGCCTCAATTTCTGCCCCGCTGATGCCATTCAGAGCGTGGAAAAGAAA
ATCGAAATCGACCCTTACCTGTGTCACGGTGCCGGAAGCTGTACCAATGCCTGTCCAACGGGTGCCATCAGTTACGATTT
GCCAAACCCTCAGGCGTTGCACAGTTTCCTCAACAAACTGGTTTCCCGTTTTCGCGATGAGGCCCTCGAAGCGCCGGTGA
TCCTGTTCCACGACCAGAATCAGGGCGCAGCGCTCATCAATGACACCTTGCCAGGAGAGGTTCTGCCGGTAGCACTGGAA
GAAATCACCGTGGCGTCAATGGACCATTGGCTGGCGGCTCTGGCGTGGGGTGCCCGCGAAGTCTTGGTGCTCAATACCCA
GGCCACAGCGCCCACCCTCACCACCATGCTCAAGGGCGAAATTGCACTGGCCTGTCGTATTTTGGCCGAAATGGGTCAGC
CAGAGCGCGTGCGTTTGATTGACGAGGCTGAGCTGGCTGCGCTGACGCCTGCACTGGATATCAGTCTGGATTGGCCGGTG
ACGGTTCCAGCCGCCTTTGGCGGTGGCAGCAAGCGCGACACCCTGTATGCCGCGATTGATCACCTCAACAGTCAGGCTGC
CGATATCAACAGCATTCTGCCCATGGGCAACATCCCCTTCGGTAAGGTCACCGTCGCCACCGATAACTGCACCCTGTGTA
TGTCCTGTGTGGCTATTTGTCCCACAGCCGCCCTCAAGGACGGCGGAGATGAACCCAAGCTGCTGTTTACCGAACAAAAC
TGTGTGCAGTGTGGCCTCTGTGAAGCTGCGTGCCCCGAGAAGGTTATCAGCCTGGTGCCCCAGGTGAATTTTGATGCTCC
CAGCCGTCAGGCGGCGCGGGTACTCAAGGAAGAAAAACCCTTTGAGTGTGTGCGCTGCGGCGCGCCCTTTGCGACCCAAT
CCATGGTGCACCGGATGCTGGATATGGTCGGCATGCACTCGGCATTTTCCGCCAACATCGAACGACTCAAGATGTGTGGC
GATTGCCGCGTGAAAGACATGTTTGAAGACATCCTTCAAGATCCGGAAAAGCAACTGAGATAA

Upstream 100 bases:

>100_bases
GAGGCAGAGAGCCCTGTCGCTCAGGGTCAGTTTAACCGAGTTTAATGTCCATAAAACTGGTATGTGAATTGCTGTAAATA
GTGCGGTCAGGTGGCGCAAG

Downstream 100 bases:

>100_bases
GAGACGCGCTATGACCCAAGCTATTCGACAAGTATCAGAGAACGATCAGTTCCGGGCAGACATATACCAGTTGTTGGCGG
CCTTGTTGCGCCGTGCCCCC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Methyl-Viologen-Reducing Hydrogenase Delta Subunit; 4Fe-4S Ferredoxin; 4fe-4S Ferredoxin; NAD(P)H-Quinone Oxidoreductase Chain I; Polyferredoxins; Ferridoxin Protein

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MRKINRKTPTLTYRNSQRTVQERNVSMIETTRRARHADIRSQVLAQTRILGNLIPPTVSYSTEGHVLILGAEDLARLAAG
KLSAMASLVILATDDISSQDEAHLERVMNAAPDVESYYNKLVSIKGFLGQFQATVEQNGTQAQLSTVAIRRPHFDIVLDL
SIEPAIQLELLPPGYFHVGQDEAKLADAVAQIPDLVGQFDKPRYVKVNADLCAHNRNGLNGCNRCLNFCPADAIQSVEKK
IEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSFLNKLVSRFRDEALEAPVILFHDQNQGAALINDTLPGEVLPVALE
EITVASMDHWLAALAWGAREVLVLNTQATAPTLTTMLKGEIALACRILAEMGQPERVRLIDEAELAALTPALDISLDWPV
TVPAAFGGGSKRDTLYAAIDHLNSQAADINSILPMGNIPFGKVTVATDNCTLCMSCVAICPTAALKDGGDEPKLLFTEQN
CVQCGLCEAACPEKVISLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRMLDMVGMHSAFSANIERLKMCG
DCRVKDMFEDILQDPEKQLR

Sequences:

>Translated_580_residues
MRKINRKTPTLTYRNSQRTVQERNVSMIETTRRARHADIRSQVLAQTRILGNLIPPTVSYSTEGHVLILGAEDLARLAAG
KLSAMASLVILATDDISSQDEAHLERVMNAAPDVESYYNKLVSIKGFLGQFQATVEQNGTQAQLSTVAIRRPHFDIVLDL
SIEPAIQLELLPPGYFHVGQDEAKLADAVAQIPDLVGQFDKPRYVKVNADLCAHNRNGLNGCNRCLNFCPADAIQSVEKK
IEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSFLNKLVSRFRDEALEAPVILFHDQNQGAALINDTLPGEVLPVALE
EITVASMDHWLAALAWGAREVLVLNTQATAPTLTTMLKGEIALACRILAEMGQPERVRLIDEAELAALTPALDISLDWPV
TVPAAFGGGSKRDTLYAAIDHLNSQAADINSILPMGNIPFGKVTVATDNCTLCMSCVAICPTAALKDGGDEPKLLFTEQN
CVQCGLCEAACPEKVISLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRMLDMVGMHSAFSANIERLKMCG
DCRVKDMFEDILQDPEKQLR
>Mature_580_residues
MRKINRKTPTLTYRNSQRTVQERNVSMIETTRRARHADIRSQVLAQTRILGNLIPPTVSYSTEGHVLILGAEDLARLAAG
KLSAMASLVILATDDISSQDEAHLERVMNAAPDVESYYNKLVSIKGFLGQFQATVEQNGTQAQLSTVAIRRPHFDIVLDL
SIEPAIQLELLPPGYFHVGQDEAKLADAVAQIPDLVGQFDKPRYVKVNADLCAHNRNGLNGCNRCLNFCPADAIQSVEKK
IEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSFLNKLVSRFRDEALEAPVILFHDQNQGAALINDTLPGEVLPVALE
EITVASMDHWLAALAWGAREVLVLNTQATAPTLTTMLKGEIALACRILAEMGQPERVRLIDEAELAALTPALDISLDWPV
TVPAAFGGGSKRDTLYAAIDHLNSQAADINSILPMGNIPFGKVTVATDNCTLCMSCVAICPTAALKDGGDEPKLLFTEQN
CVQCGLCEAACPEKVISLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRMLDMVGMHSAFSANIERLKMCG
DCRVKDMFEDILQDPEKQLR

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63219; Mature: 63219

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKINRKTPTLTYRNSQRTVQERNVSMIETTRRARHADIRSQVLAQTRILGNLIPPTVSY
CCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
STEGHVLILGAEDLARLAAGKLSAMASLVILATDDISSQDEAHLERVMNAAPDVESYYNK
CCCCCEEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHH
LVSIKGFLGQFQATVEQNGTQAQLSTVAIRRPHFDIVLDLSIEPAIQLELLPPGYFHVGQ
HHHHHHHHHHHHHHHHCCCCHHEEHEEEEECCCEEEEEEEECCCCEEEEEECCCCEECCC
DEAKLADAVAQIPDLVGQFDKPRYVKVNADLCAHNRNGLNGCNRCLNFCPADAIQSVEKK
CHHHHHHHHHHHHHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
IEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSFLNKLVSRFRDEALEAPVILFHDQN
CCCCCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
QGAALINDTLPGEVLPVALEEITVASMDHWLAALAWGAREVLVLNTQATAPTLTTMLKGE
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
IALACRILAEMGQPERVRLIDEAELAALTPALDISLDWPVTVPAAFGGGSKRDTLYAAID
HHHHHHHHHHCCCCCEEEEECHHHHHHHCCCEEEEECCCEEECEECCCCCCCCHHHHHHH
HLNSQAADINSILPMGNIPFGKVTVATDNCTLCMSCVAICPTAALKDGGDEPKLLFTEQN
HHCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHCCCCCCCCEEEECCC
CVQCGLCEAACPEKVISLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRML
CHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHEECCCCHHHHHHHHHHH
DMVGMHSAFSANIERLKMCGDCRVKDMFEDILQDPEKQLR
HHHHCHHHHHHCHHHHHHCCCCCHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MRKINRKTPTLTYRNSQRTVQERNVSMIETTRRARHADIRSQVLAQTRILGNLIPPTVSY
CCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
STEGHVLILGAEDLARLAAGKLSAMASLVILATDDISSQDEAHLERVMNAAPDVESYYNK
CCCCCEEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHH
LVSIKGFLGQFQATVEQNGTQAQLSTVAIRRPHFDIVLDLSIEPAIQLELLPPGYFHVGQ
HHHHHHHHHHHHHHHHCCCCHHEEHEEEEECCCEEEEEEEECCCCEEEEEECCCCEECCC
DEAKLADAVAQIPDLVGQFDKPRYVKVNADLCAHNRNGLNGCNRCLNFCPADAIQSVEKK
CHHHHHHHHHHHHHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
IEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSFLNKLVSRFRDEALEAPVILFHDQN
CCCCCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
QGAALINDTLPGEVLPVALEEITVASMDHWLAALAWGAREVLVLNTQATAPTLTTMLKGE
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
IALACRILAEMGQPERVRLIDEAELAALTPALDISLDWPVTVPAAFGGGSKRDTLYAAID
HHHHHHHHHHCCCCCEEEEECHHHHHHHCCCEEEEECCCEEECEECCCCCCCCHHHHHHH
HLNSQAADINSILPMGNIPFGKVTVATDNCTLCMSCVAICPTAALKDGGDEPKLLFTEQN
HHCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHCCCCCCCCEEEECCC
CVQCGLCEAACPEKVISLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRML
CHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHEECCCCHHHHHHHHHHH
DMVGMHSAFSANIERLKMCGDCRVKDMFEDILQDPEKQLR
HHHHCHHHHHHCHHHHHHCCCCCHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA