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The map label for this gene is tap [H]

Identifier: 119776730

GI number: 119776730

Start: 4231474

End: 4232712

Strand: Reverse

Name: tap [H]

Synonym: Sama_3598

Alternate gene names: 119776730

Gene position: 4232712-4231474 (Counterclockwise)

Preceding gene: 119776732

Following gene: 119776727

Centisome position: 98.29

GC content: 54.56

Gene sequence:

>1239_bases
ATGACATCAAAGACTGTGTGGCTGATTATTCTGTTGGGTTATGGGCTCTTGGGAGCCCTGTTTGCGGGAGCCTGGATACT
CGGCTTGTGGCAGGCCGGTTTGCTGCTCATGGCGGCATTTGGTGCCCTGGTTGCCTGGGTTATCAGGCGCCAGTTCGCCG
ATAGTGCCCAGTTGTTGGCACGGTCCATGAACATTCAAAACGGCAGTGTCGATTTGCAAGTCCGGCTCGATACCGCGAAC
CATTCCTCCCTGCGTGAATGTATCGAGGCCAGCAACGCCCTGCGGGTCTTTATGGATGTGCAACTCCTGTCGGTGTCTGA
ATCTGTGGGGCGTCTCATTCCTATCTCTTCCGAATTATCAGAGTCATACTCAAATATGACCCAAAAGGTCAGCCTGCAAA
ATCAAGTCAGCGGTGCCATAGAAACCGACATGGAGTCTATGTGGCAGGCCTGTTTGCATGTGCAGGCCATGACAGAGCGC
ATTGTGGTGGCCTCCAATGCCAGTGATGACAAGGTCAAACAAGGCATGAGCACCACTCAGGTTGCCCTGACGAGTTTTCA
TGATCTCACCAAACGCCTTGAAAAAGCCTTTGCAGAGGTGGAACAACTCAAACAAAGCAGTGACAGAATTGGCGGCATTC
TCGAGGTGATCAACTCGATTTCACAGCAAACAAACTTGCTTGCACTGAACGCAGCTATTGAGGCGGCAAGGGCCGGAGAG
GCTGGCAGAGGGTTTGCTGTAGTGGCCGATGAAGTACGCTCTCTGGCTGGTCGCACCGCCGAGTCTACCCACGAGGTGCG
TGCCATTACCGATGAGATATTGCGGGCGGTCAGTATGTTGTCCCAACACATTCATGAATCACACAACGAACTCTCTGTGA
CCCAGCAACAAATCGATGGGGTGGAAGTGTCCCTGTCCGGCATCGCCGAGGCCGTGCAGGAAACCAATGGCGCAGTCGCC
GAGATTTCTCAGGCCATCGAAGAGCAGACCAGGGCCGCCAAACATGTTCGCCAGTCTATTGACGGATTGCAGGAGTTGAA
TCGGGATGCACTGACAGGCTCGCAGCTGCACACAGTTTCGGCGGATGACCTGACCCGGCTGGCGAACCATCTCTATGACA
AGATGGCGGTGTTTACACTGTCACAGCACCCCGACAGCAAAACCTTTGTGCGCCGAAGCCAAAGCCGTCATGAGTCTGAC
GCTTCGGCGGCAGACTCTTCCGGGGTGGAGCTGTTCTAG

Upstream 100 bases:

>100_bases
CGTGATGTCCTGTTTCGCCATCTTGGGTTGCGGAATTTTTTGGCAATAAATTCAACCTACGGTCATACTCAAGTGCCAGA
AAGGGAGGCCGGGACCCAAT

Downstream 100 bases:

>100_bases
CCGAGTCTGCTTGAGGTTAGTTGGTTGGTGTCGCCTTATGATCAGAGGGGTGATTGACGCCATCACAAACGGGAATTTCG
CCCAAAAGAAAGGGGTCAAC

Product: putative methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-IV; Dipeptide chemoreceptor protein [H]

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTSKTVWLIILLGYGLLGALFAGAWILGLWQAGLLLMAAFGALVAWVIRRQFADSAQLLARSMNIQNGSVDLQVRLDTAN
HSSLRECIEASNALRVFMDVQLLSVSESVGRLIPISSELSESYSNMTQKVSLQNQVSGAIETDMESMWQACLHVQAMTER
IVVASNASDDKVKQGMSTTQVALTSFHDLTKRLEKAFAEVEQLKQSSDRIGGILEVINSISQQTNLLALNAAIEAARAGE
AGRGFAVVADEVRSLAGRTAESTHEVRAITDEILRAVSMLSQHIHESHNELSVTQQQIDGVEVSLSGIAEAVQETNGAVA
EISQAIEEQTRAAKHVRQSIDGLQELNRDALTGSQLHTVSADDLTRLANHLYDKMAVFTLSQHPDSKTFVRRSQSRHESD
ASAADSSGVELF

Sequences:

>Translated_412_residues
MTSKTVWLIILLGYGLLGALFAGAWILGLWQAGLLLMAAFGALVAWVIRRQFADSAQLLARSMNIQNGSVDLQVRLDTAN
HSSLRECIEASNALRVFMDVQLLSVSESVGRLIPISSELSESYSNMTQKVSLQNQVSGAIETDMESMWQACLHVQAMTER
IVVASNASDDKVKQGMSTTQVALTSFHDLTKRLEKAFAEVEQLKQSSDRIGGILEVINSISQQTNLLALNAAIEAARAGE
AGRGFAVVADEVRSLAGRTAESTHEVRAITDEILRAVSMLSQHIHESHNELSVTQQQIDGVEVSLSGIAEAVQETNGAVA
EISQAIEEQTRAAKHVRQSIDGLQELNRDALTGSQLHTVSADDLTRLANHLYDKMAVFTLSQHPDSKTFVRRSQSRHESD
ASAADSSGVELF
>Mature_411_residues
TSKTVWLIILLGYGLLGALFAGAWILGLWQAGLLLMAAFGALVAWVIRRQFADSAQLLARSMNIQNGSVDLQVRLDTANH
SSLRECIEASNALRVFMDVQLLSVSESVGRLIPISSELSESYSNMTQKVSLQNQVSGAIETDMESMWQACLHVQAMTERI
VVASNASDDKVKQGMSTTQVALTSFHDLTKRLEKAFAEVEQLKQSSDRIGGILEVINSISQQTNLLALNAAIEAARAGEA
GRGFAVVADEVRSLAGRTAESTHEVRAITDEILRAVSMLSQHIHESHNELSVTQQQIDGVEVSLSGIAEAVQETNGAVAE
ISQAIEEQTRAAKHVRQSIDGLQELNRDALTGSQLHTVSADDLTRLANHLYDKMAVFTLSQHPDSKTFVRRSQSRHESDA
SAADSSGVELF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=200, Percent_Identity=35.5, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787690, Length=178, Percent_Identity=36.5168539325843, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1789453, Length=208, Percent_Identity=31.7307692307692, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788195, Length=167, Percent_Identity=35.9281437125749, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI2367378, Length=131, Percent_Identity=39.6946564885496, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 44738; Mature: 44607

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKTVWLIILLGYGLLGALFAGAWILGLWQAGLLLMAAFGALVAWVIRRQFADSAQLLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSMNIQNGSVDLQVRLDTANHSSLRECIEASNALRVFMDVQLLSVSESVGRLIPISSELS
HHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ESYSNMTQKVSLQNQVSGAIETDMESMWQACLHVQAMTERIVVASNASDDKVKQGMSTTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCHHH
VALTSFHDLTKRLEKAFAEVEQLKQSSDRIGGILEVINSISQQTNLLALNAAIEAARAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGRGFAVVADEVRSLAGRTAESTHEVRAITDEILRAVSMLSQHIHESHNELSVTQQQIDG
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
VEVSLSGIAEAVQETNGAVAEISQAIEEQTRAAKHVRQSIDGLQELNRDALTGSQLHTVS
HHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECC
ADDLTRLANHLYDKMAVFTLSQHPDSKTFVRRSQSRHESDASAADSSGVELF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSKTVWLIILLGYGLLGALFAGAWILGLWQAGLLLMAAFGALVAWVIRRQFADSAQLLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSMNIQNGSVDLQVRLDTANHSSLRECIEASNALRVFMDVQLLSVSESVGRLIPISSELS
HHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ESYSNMTQKVSLQNQVSGAIETDMESMWQACLHVQAMTERIVVASNASDDKVKQGMSTTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCHHH
VALTSFHDLTKRLEKAFAEVEQLKQSSDRIGGILEVINSISQQTNLLALNAAIEAARAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGRGFAVVADEVRSLAGRTAESTHEVRAITDEILRAVSMLSQHIHESHNELSVTQQQIDG
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
VEVSLSGIAEAVQETNGAVAEISQAIEEQTRAAKHVRQSIDGLQELNRDALTGSQLHTVS
HHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECC
ADDLTRLANHLYDKMAVFTLSQHPDSKTFVRRSQSRHESDASAADSSGVELF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6305515; 9097040; 9278503 [H]