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The map label for this gene is hspC2 [H]

Identifier: 119776712

GI number: 119776712

Start: 4215225

End: 4215650

Strand: Direct

Name: hspC2 [H]

Synonym: Sama_3580

Alternate gene names: 119776712

Gene position: 4215225-4215650 (Clockwise)

Preceding gene: 119776711

Following gene: 119776713

Centisome position: 97.89

GC content: 52.11

Gene sequence:

>426_bases
ATGAAACTGCGTCCCTGGAATCCTGCTGAAACTTTCGACGACATGCTGCGCCGGTTTGAGCCCATGTTGCACTGGCCCAC
CGCCATGGTAAATGGCCAGCGTAACTGGTTACCTGCGACCGATATCAGCGAAAACGCCGAAAGCTATCAGCTGAAAGTCG
AAATGCCCGAGATCAGCAAGGATGATATCCAATTGGCCGTCGAAGATGGCTATCTGGTTCTCAGTGGCGAACGCAAGTAT
GAGCACACCGACGATAAGCAGCATCTGAACGAGCGATTCCACGGGCAATTTACCCGCCGCTTCCAGTTGCCTGACAACGT
TGACGATACTGCCATCGATGCCCGATTCGAAAACGGCATGTTATACCTGACCCTGCCAAAGACAGAGGTCAAAAAAGAAC
GCTGCCAACGGATTGATATCCACTAG

Upstream 100 bases:

>100_bases
GCCTTGAAAACCCCGGCACAAAGACCATAATTTTTCAAGGGAGATATAGCTCTCCCCTTCGTTGAAGTGAGACAGGACGG
ACGTCTGTAAGGAGGACATC

Downstream 100 bases:

>100_bases
AGTCATGGCTCATGGTACGAAGAAAAGCGCCGCCATTGCGGCGCTTTATTTATCACTGAACTGTGCTGTTCTCTTGTTCC
AGTACCTTGTACCGGTAAGG

Product: molecular chaperone (small heat shock protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKLRPWNPAETFDDMLRRFEPMLHWPTAMVNGQRNWLPATDISENAESYQLKVEMPEISKDDIQLAVEDGYLVLSGERKY
EHTDDKQHLNERFHGQFTRRFQLPDNVDDTAIDARFENGMLYLTLPKTEVKKERCQRIDIH

Sequences:

>Translated_141_residues
MKLRPWNPAETFDDMLRRFEPMLHWPTAMVNGQRNWLPATDISENAESYQLKVEMPEISKDDIQLAVEDGYLVLSGERKY
EHTDDKQHLNERFHGQFTRRFQLPDNVDDTAIDARFENGMLYLTLPKTEVKKERCQRIDIH
>Mature_141_residues
MKLRPWNPAETFDDMLRRFEPMLHWPTAMVNGQRNWLPATDISENAESYQLKVEMPEISKDDIQLAVEDGYLVLSGERKY
EHTDDKQHLNERFHGQFTRRFQLPDNVDDTAIDARFENGMLYLTLPKTEVKKERCQRIDIH

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16764; Mature: 16764

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRPWNPAETFDDMLRRFEPMLHWPTAMVNGQRNWLPATDISENAESYQLKVEMPEISK
CCCCCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCC
DDIQLAVEDGYLVLSGERKYEHTDDKQHLNERFHGQFTRRFQLPDNVDDTAIDARFENGM
CCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCE
LYLTLPKTEVKKERCQRIDIH
EEEEECCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLRPWNPAETFDDMLRRFEPMLHWPTAMVNGQRNWLPATDISENAESYQLKVEMPEISK
CCCCCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCC
DDIQLAVEDGYLVLSGERKYEHTDDKQHLNERFHGQFTRRFQLPDNVDDTAIDARFENGM
CCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCE
LYLTLPKTEVKKERCQRIDIH
EEEEECCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA