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The map label for this gene is yhiR [H]

Identifier: 119776695

GI number: 119776695

Start: 4198047

End: 4198901

Strand: Reverse

Name: yhiR [H]

Synonym: Sama_3563

Alternate gene names: 119776695

Gene position: 4198901-4198047 (Counterclockwise)

Preceding gene: 119776697

Following gene: 119776691

Centisome position: 97.51

GC content: 52.4

Gene sequence:

>855_bases
ATGTTGAGTTATCGCCATGGCTTTCATGCTGGCAACTATGCGGATGTGCTAAAGCACGCCATTTTGCTGCAAGTTATCGA
TTTAATGCAGAAAAAGGATAAGCCTTTTGTGTACGTAGACACCCATTCCGGGGCGGGTGGCTATAGTCTGATGGATGAAT
TTGCCCAAAAGACCGGCGAATACAGAGACGGTATTGCCCGTTTGTGGGATAAAACCGATTTGCCCGCATCGCTCAAACAC
TATGTTGAGGCCGTGCGCCATTTCAATGAAGGCAACGAAAATACCAGCGAAGATCTCTCCTGGTATCCGGGGTCGCCGGC
GTTTGTGGATATGCACCTTCGGCAAAACGATCGTATGGTGTTGCACGAACTGCACGGTACCGACTTTGAACTCCTGAATG
AATACTTTGAAGATGCCCGCCAGGTACAGGTCAGTAAATGGGATGGTCTAAGCGGTCTGCTGGCCAGCGTGCCGCCGCTG
GAGCGTCGTGGCGTGGTGTTGGTAGACCCAAGTTTTGAAATCAAGACCGACTATGAAGCCGTGGCTGATGCCATCATCAA
GGCTCACCGCAAGTTTGCCACTGGGGTATACATGCTTTGGTATCCGGTGGTAAACCGTGCACAAACCGAGGCCATGCTCT
CAAAGCTCAAAGACAGCGGCATTCGTCGGCAGCTCAGGATTGAGCAGGGCATCAAGCCCGACTCAGACGAGTTCGGCATG
ACGGCTGCTGGCCTTTGGGTGATTAACCCGCCCTGGCAACTGGACACCATAGCCACAGAGATGCTGGACTATTTGCACCC
TGTGCTCAATGTTGACGGCGGTTATGTCAAGGTTGAGTGGGAAGTGGGCGAGTAA

Upstream 100 bases:

>100_bases
TAACGCCAACCCGGGCGCGCCGGAACAAAAGCATACAGTGGCTTGGCAAGCAGTTATAATGTTGGCAGTTTTCAACCCAG
TACAGATCCCGGGATCCCCT

Downstream 100 bases:

>100_bases
CGGCTTGCCGTCGATTCCAATAAAAAACGGGCTTATTGCCCGTTTTTTATTGGCCGCAGGTCTTGGATGGGAATACTTCC
ATGGACCTTTTACCGCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLSYRHGFHAGNYADVLKHAILLQVIDLMQKKDKPFVYVDTHSGAGGYSLMDEFAQKTGEYRDGIARLWDKTDLPASLKH
YVEAVRHFNEGNENTSEDLSWYPGSPAFVDMHLRQNDRMVLHELHGTDFELLNEYFEDARQVQVSKWDGLSGLLASVPPL
ERRGVVLVDPSFEIKTDYEAVADAIIKAHRKFATGVYMLWYPVVNRAQTEAMLSKLKDSGIRRQLRIEQGIKPDSDEFGM
TAAGLWVINPPWQLDTIATEMLDYLHPVLNVDGGYVKVEWEVGE

Sequences:

>Translated_284_residues
MLSYRHGFHAGNYADVLKHAILLQVIDLMQKKDKPFVYVDTHSGAGGYSLMDEFAQKTGEYRDGIARLWDKTDLPASLKH
YVEAVRHFNEGNENTSEDLSWYPGSPAFVDMHLRQNDRMVLHELHGTDFELLNEYFEDARQVQVSKWDGLSGLLASVPPL
ERRGVVLVDPSFEIKTDYEAVADAIIKAHRKFATGVYMLWYPVVNRAQTEAMLSKLKDSGIRRQLRIEQGIKPDSDEFGM
TAAGLWVINPPWQLDTIATEMLDYLHPVLNVDGGYVKVEWEVGE
>Mature_284_residues
MLSYRHGFHAGNYADVLKHAILLQVIDLMQKKDKPFVYVDTHSGAGGYSLMDEFAQKTGEYRDGIARLWDKTDLPASLKH
YVEAVRHFNEGNENTSEDLSWYPGSPAFVDMHLRQNDRMVLHELHGTDFELLNEYFEDARQVQVSKWDGLSGLLASVPPL
ERRGVVLVDPSFEIKTDYEAVADAIIKAHRKFATGVYMLWYPVVNRAQTEAMLSKLKDSGIRRQLRIEQGIKPDSDEFGM
TAAGLWVINPPWQLDTIATEMLDYLHPVLNVDGGYVKVEWEVGE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=285, Percent_Identity=48.7719298245614, Blast_Score=291, Evalue=4e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32344; Mature: 32344

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHGFHAGNYADVLKHAILLQVIDLMQKKDKPFVYVDTHSGAGGYSLMDEFAQKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCH
YRDGIARLWDKTDLPASLKHYVEAVRHFNEGNENTSEDLSWYPGSPAFVDMHLRQNDRMV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEE
LHELHGTDFELLNEYFEDARQVQVSKWDGLSGLLASVPPLERRGVVLVDPSFEIKTDYEA
EHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCHHH
VADAIIKAHRKFATGVYMLWYPVVNRAQTEAMLSKLKDSGIRRQLRIEQGIKPDSDEFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TAAGLWVINPPWQLDTIATEMLDYLHPVLNVDGGYVKVEWEVGE
EEECEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure
MLSYRHGFHAGNYADVLKHAILLQVIDLMQKKDKPFVYVDTHSGAGGYSLMDEFAQKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCH
YRDGIARLWDKTDLPASLKHYVEAVRHFNEGNENTSEDLSWYPGSPAFVDMHLRQNDRMV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEE
LHELHGTDFELLNEYFEDARQVQVSKWDGLSGLLASVPPLERRGVVLVDPSFEIKTDYEA
EHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCHHH
VADAIIKAHRKFATGVYMLWYPVVNRAQTEAMLSKLKDSGIRRQLRIEQGIKPDSDEFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TAAGLWVINPPWQLDTIATEMLDYLHPVLNVDGGYVKVEWEVGE
EEECEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]