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The map label for this gene is tse [H]

Identifier: 119776629

GI number: 119776629

Start: 4127316

End: 4129898

Strand: Direct

Name: tse [H]

Synonym: Sama_3497

Alternate gene names: 119776629

Gene position: 4127316-4129898 (Clockwise)

Preceding gene: 119776628

Following gene: 119776630

Centisome position: 95.85

GC content: 53.74

Gene sequence:

>2583_bases
ATGGACGCAGGCAATAAAAAGCTGATGGGGCCAGCCCCATTTACCTTGGCCGGCATGGTGATAGTTGCCGTTTCTTTGGT
ACTCAGCCTGATGGGGCAATCCGGCAACATGGTCAGTGCTGCCCTGGTTGTAGCGCTGATTGTTTTGGGTATTGGTTTAA
GTCAGGGCGGCCCAAGAGTCGCAGAAGCTCTGGCAGAAATACGTCAGGCACTGCGAAGCCATAACAGACCCAAACTTGGC
AGTTACGATATCCCTGGCTGGCAGGAGTTCTCTGAAGAATTTGCCATCTTCTGGGACGAGCAGCAAAAAGGCCGCGCCAC
TCTCAAAGCCCTGGATATCTGCCAGGCTAACGTAATGCTGGCGGACCCCAACGGGGAAATCCTCTACTTTAACGACTCGC
TCCGCACCACACTGAGCGATGCAGAAGCGGATATTCGCAAAGAATTACCCAACTTTGATGTGAGTCGCCTGCAGGGCGCC
AACATGGACAGCTTCCATCGGGATCCATCCCATCAGCGCCGTCTGATAGCCGGGTTAAAATCCACCTACTCCGCCAAAAT
CAAGGTCGGTACCCGTACCTTCAGCCTGATAGCCTCCCCCGTGTTCGATGAACAGCATCAACGTATCGCAACCGTAGTGG
AATGGCAGGACTTAACTGAATCCCTGGCACGGCAGCAAGCCGAAGAAAAACTGATCCGCGAAACCAACCGTATCAAGCAG
GCGCTGGATGTGTGTCAGGCGAACGTGATGATGGCCGATGAAAATAACAACATCATTTACTTCAACCACTCCCTCCAAGC
CATGTTGGCCGGTAATGAGGAAAAGCTGCGCGAATCCATCAACCGATTTGATGTTTCCACCCTGATGGGCACCAACATAG
ATATCTTCCACAAACACCCCGAGCATCAGCGCCAGTTACTGGCCAAGCTCACCAGCTCGTACAAGGCCCGTATCAAGGTA
GCAGGCTTGACCTTCGACCTGATTGCCACACCGGTATTCGACAATGGCAAACGCACAGGCACCGTAGTGGAGTGGAGCGA
CATTACTGCACAGTTGGCCAGGGAAGAGAAAGAACGGGCTCTCGCTGCCGAAAATGCCCGAATCCGTCAGGCGCTTGACA
ATGTATCGTCAAACACCATGGTGGCGGATGCAGACTGCAACATCATCTATCTCAATGATGCCGTTAAAAAAATGTTCAGC
ATTGCCCAATCCGACATTGTCAGGGATCTGCCCAATTTCAACAGCAATAAGCTGATGGGTGCAAATATCGATGTGTTCCA
TAAAAACCCTGCTCACCAACGAAACCTGCTGGCTAACCTCACCAGTACTTACACCAGTCAACTTAAAGTCGGTGGTCGCA
CCTTCCGGATCATCGCCAACCCTATCAACGACACCGATGGCACCCGCATAGGGACTGTGGTTGAGTGGGCAGACCGCACC
GCTGAAACGGCCATCGAGCATGAGATTGATGGCATCATCGCGGCCGCAAGCTCGGGCGATTTGTCACAGCGCATTGCCAC
CCATGATAAAGAAGGCTTCTTCCTCAATCTCTCCAACGGCCTCAACAGCCTTGTCGGCATTGCCGATAACGTTATTTCCG
ATGTCGTTGATATGTTTGACGGTTTGGCCAAGGGTGATTTAACCCGCAAGATTAATGGCGAATATGAGGGCCAGTTCGGC
AAGCTCAAGGCCGACGCCAATGCTACCGTCAGCCGCCTGACCGAAGTCCTCGGCGGCATCAGCGAATCAGCCAATACCGT
CACTTCAGGCGCCGAAGAAATAGCTCAGGGCAATGCCGATCTGAGCCAGCGCACCGAAGAGCAAGCCGCGTCACTGGAAG
AAACAGCCTCCAGCATGGAACAGATGACGGCCACCGTAAAACAGAGCGCCGAAAACGCCACCCTGGCTAACACCCTCGCC
AAAGAAGCCTCTACCAAGGCAGATCATGGCGGCAAGGTAGTCAAGCAGGCAGTCACCGCCATGGAGGCCATTAACGAATC
CAGTAAGCGCATTGCTGACATCATAGGTGTCATCGACGAAATCGCCTTCCAGACTAACCTACTGGCACTGAATGCAGCGG
TAGAAGCAGCCCGCGCCGGTGAACAGGGCAGAGGCTTTGCCGTGGTGGCTGGCGAGGTTCGCAATCTCGCCCAACGCTCA
GCGGGGGCGGCCAAGGAAATCAAAGAACTTATCCGCGACAGCGTCAATAAGGTCAATGACGGTACCTCGTTGGTGAACCA
ATCCGGTAATACCCTGCAGGAAATCGTGCATGCGGTATCCAAGGTGGCTGAGATGATTAATGAAATCAGTGTCGCAGCCG
AGCAGCAGGCATCAGGCATTCAGGAAGTTAATAAAGCAGTGTCTCAAATGGACGAGATGACCCAGCAAAACGCGGCACTG
GTGGAAGAAGTATCCGCAGCTGGTGATGCCATGGCCGAGCAGGCCCGCAATATGCGACGTCAACTCGGGTTCTTCAGAAC
CGACGTACAGGCATCCTCAGCGGCGCCACTGGCATTGGTCGCTGGCGGCGAAAAACGGCCGACCAAATTTAAAGCCAGTA
AAGAAGAATGGCACGAGTTCTGA

Upstream 100 bases:

>100_bases
TTACCGGATCCCGAGACACTGAATCGGATCATCGGCAATCTCGAACAACAAGCTCAGGTAATGACTGCCTGAAATGGACA
CTAAAGCAAGAGGAATCAAC

Downstream 100 bases:

>100_bases
CCTGACCACCAACAAGGGGCTCGTCAGAGCCCCTTGTTGTCAGAGATGCTTTTGGGGCCAAAGGAGGCGCTTTGGAATTC
ACATCCGAACGGGAGTTTCC

Product: putative methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 860; Mature: 860

Protein sequence:

>860_residues
MDAGNKKLMGPAPFTLAGMVIVAVSLVLSLMGQSGNMVSAALVVALIVLGIGLSQGGPRVAEALAEIRQALRSHNRPKLG
SYDIPGWQEFSEEFAIFWDEQQKGRATLKALDICQANVMLADPNGEILYFNDSLRTTLSDAEADIRKELPNFDVSRLQGA
NMDSFHRDPSHQRRLIAGLKSTYSAKIKVGTRTFSLIASPVFDEQHQRIATVVEWQDLTESLARQQAEEKLIRETNRIKQ
ALDVCQANVMMADENNNIIYFNHSLQAMLAGNEEKLRESINRFDVSTLMGTNIDIFHKHPEHQRQLLAKLTSSYKARIKV
AGLTFDLIATPVFDNGKRTGTVVEWSDITAQLAREEKERALAAENARIRQALDNVSSNTMVADADCNIIYLNDAVKKMFS
IAQSDIVRDLPNFNSNKLMGANIDVFHKNPAHQRNLLANLTSTYTSQLKVGGRTFRIIANPINDTDGTRIGTVVEWADRT
AETAIEHEIDGIIAAASSGDLSQRIATHDKEGFFLNLSNGLNSLVGIADNVISDVVDMFDGLAKGDLTRKINGEYEGQFG
KLKADANATVSRLTEVLGGISESANTVTSGAEEIAQGNADLSQRTEEQAASLEETASSMEQMTATVKQSAENATLANTLA
KEASTKADHGGKVVKQAVTAMEAINESSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRS
AGAAKEIKELIRDSVNKVNDGTSLVNQSGNTLQEIVHAVSKVAEMINEISVAAEQQASGIQEVNKAVSQMDEMTQQNAAL
VEEVSAAGDAMAEQARNMRRQLGFFRTDVQASSAAPLALVAGGEKRPTKFKASKEEWHEF

Sequences:

>Translated_860_residues
MDAGNKKLMGPAPFTLAGMVIVAVSLVLSLMGQSGNMVSAALVVALIVLGIGLSQGGPRVAEALAEIRQALRSHNRPKLG
SYDIPGWQEFSEEFAIFWDEQQKGRATLKALDICQANVMLADPNGEILYFNDSLRTTLSDAEADIRKELPNFDVSRLQGA
NMDSFHRDPSHQRRLIAGLKSTYSAKIKVGTRTFSLIASPVFDEQHQRIATVVEWQDLTESLARQQAEEKLIRETNRIKQ
ALDVCQANVMMADENNNIIYFNHSLQAMLAGNEEKLRESINRFDVSTLMGTNIDIFHKHPEHQRQLLAKLTSSYKARIKV
AGLTFDLIATPVFDNGKRTGTVVEWSDITAQLAREEKERALAAENARIRQALDNVSSNTMVADADCNIIYLNDAVKKMFS
IAQSDIVRDLPNFNSNKLMGANIDVFHKNPAHQRNLLANLTSTYTSQLKVGGRTFRIIANPINDTDGTRIGTVVEWADRT
AETAIEHEIDGIIAAASSGDLSQRIATHDKEGFFLNLSNGLNSLVGIADNVISDVVDMFDGLAKGDLTRKINGEYEGQFG
KLKADANATVSRLTEVLGGISESANTVTSGAEEIAQGNADLSQRTEEQAASLEETASSMEQMTATVKQSAENATLANTLA
KEASTKADHGGKVVKQAVTAMEAINESSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRS
AGAAKEIKELIRDSVNKVNDGTSLVNQSGNTLQEIVHAVSKVAEMINEISVAAEQQASGIQEVNKAVSQMDEMTQQNAAL
VEEVSAAGDAMAEQARNMRRQLGFFRTDVQASSAAPLALVAGGEKRPTKFKASKEEWHEF
>Mature_860_residues
MDAGNKKLMGPAPFTLAGMVIVAVSLVLSLMGQSGNMVSAALVVALIVLGIGLSQGGPRVAEALAEIRQALRSHNRPKLG
SYDIPGWQEFSEEFAIFWDEQQKGRATLKALDICQANVMLADPNGEILYFNDSLRTTLSDAEADIRKELPNFDVSRLQGA
NMDSFHRDPSHQRRLIAGLKSTYSAKIKVGTRTFSLIASPVFDEQHQRIATVVEWQDLTESLARQQAEEKLIRETNRIKQ
ALDVCQANVMMADENNNIIYFNHSLQAMLAGNEEKLRESINRFDVSTLMGTNIDIFHKHPEHQRQLLAKLTSSYKARIKV
AGLTFDLIATPVFDNGKRTGTVVEWSDITAQLAREEKERALAAENARIRQALDNVSSNTMVADADCNIIYLNDAVKKMFS
IAQSDIVRDLPNFNSNKLMGANIDVFHKNPAHQRNLLANLTSTYTSQLKVGGRTFRIIANPINDTDGTRIGTVVEWADRT
AETAIEHEIDGIIAAASSGDLSQRIATHDKEGFFLNLSNGLNSLVGIADNVISDVVDMFDGLAKGDLTRKINGEYEGQFG
KLKADANATVSRLTEVLGGISESANTVTSGAEEIAQGNADLSQRTEEQAASLEETASSMEQMTATVKQSAENATLANTLA
KEASTKADHGGKVVKQAVTAMEAINESSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRS
AGAAKEIKELIRDSVNKVNDGTSLVNQSGNTLQEIVHAVSKVAEMINEISVAAEQQASGIQEVNKAVSQMDEMTQQNAAL
VEEVSAAGDAMAEQARNMRRQLGFFRTDVQASSAAPLALVAGGEKRPTKFKASKEEWHEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=327, Percent_Identity=52.9051987767584, Blast_Score=276, Evalue=4e-75,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=52.2875816993464, Blast_Score=270, Evalue=4e-73,
Organism=Escherichia coli, GI1787690, Length=314, Percent_Identity=49.6815286624204, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1788194, Length=291, Percent_Identity=52.9209621993127, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1789453, Length=239, Percent_Identity=43.5146443514644, Blast_Score=190, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 93339; Mature: 93339

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50112 PAS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAGNKKLMGPAPFTLAGMVIVAVSLVLSLMGQSGNMVSAALVVALIVLGIGLSQGGPRV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHH
AEALAEIRQALRSHNRPKLGSYDIPGWQEFSEEFAIFWDEQQKGRATLKALDICQANVML
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCEEE
ADPNGEILYFNDSLRTTLSDAEADIRKELPNFDVSRLQGANMDSFHRDPSHQRRLIAGLK
ECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
STYSAKIKVGTRTFSLIASPVFDEQHQRIATVVEWQDLTESLARQQAEEKLIRETNRIKQ
HCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALDVCQANVMMADENNNIIYFNHSLQAMLAGNEEKLRESINRFDVSTLMGTNIDIFHKHP
HHHHHHHCEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
EHQRQLLAKLTSSYKARIKVAGLTFDLIATPVFDNGKRTGTVVEWSDITAQLAREEKERA
HHHHHHHHHHHHHHHCEEEEECEEEEHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
LAAENARIRQALDNVSSNTMVADADCNIIYLNDAVKKMFSIAQSDIVRDLPNFNSNKLMG
HHHHHHHHHHHHHCCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEC
ANIDVFHKNPAHQRNLLANLTSTYTSQLKVGGRTFRIIANPINDTDGTRIGTVVEWADRT
CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
AETAIEHEIDGIIAAASSGDLSQRIATHDKEGFFLNLSNGLNSLVGIADNVISDVVDMFD
HHHHHHHHHCCEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
GLAKGDLTRKINGEYEGQFGKLKADANATVSRLTEVLGGISESANTVTSGAEEIAQGNAD
HHHCCCCHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
LSQRTEEQAASLEETASSMEQMTATVKQSAENATLANTLAKEASTKADHGGKVVKQAVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MEAINESSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHC
AGAAKEIKELIRDSVNKVNDGTSLVNQSGNTLQEIVHAVSKVAEMINEISVAAEQQASGI
CCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVNKAVSQMDEMTQQNAALVEEVSAAGDAMAEQARNMRRQLGFFRTDVQASSAAPLALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
AGGEKRPTKFKASKEEWHEF
ECCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MDAGNKKLMGPAPFTLAGMVIVAVSLVLSLMGQSGNMVSAALVVALIVLGIGLSQGGPRV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHH
AEALAEIRQALRSHNRPKLGSYDIPGWQEFSEEFAIFWDEQQKGRATLKALDICQANVML
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCEEE
ADPNGEILYFNDSLRTTLSDAEADIRKELPNFDVSRLQGANMDSFHRDPSHQRRLIAGLK
ECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
STYSAKIKVGTRTFSLIASPVFDEQHQRIATVVEWQDLTESLARQQAEEKLIRETNRIKQ
HCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALDVCQANVMMADENNNIIYFNHSLQAMLAGNEEKLRESINRFDVSTLMGTNIDIFHKHP
HHHHHHHCEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
EHQRQLLAKLTSSYKARIKVAGLTFDLIATPVFDNGKRTGTVVEWSDITAQLAREEKERA
HHHHHHHHHHHHHHHCEEEEECEEEEHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
LAAENARIRQALDNVSSNTMVADADCNIIYLNDAVKKMFSIAQSDIVRDLPNFNSNKLMG
HHHHHHHHHHHHHCCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEC
ANIDVFHKNPAHQRNLLANLTSTYTSQLKVGGRTFRIIANPINDTDGTRIGTVVEWADRT
CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
AETAIEHEIDGIIAAASSGDLSQRIATHDKEGFFLNLSNGLNSLVGIADNVISDVVDMFD
HHHHHHHHHCCEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
GLAKGDLTRKINGEYEGQFGKLKADANATVSRLTEVLGGISESANTVTSGAEEIAQGNAD
HHHCCCCHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
LSQRTEEQAASLEETASSMEQMTATVKQSAENATLANTLAKEASTKADHGGKVVKQAVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MEAINESSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHC
AGAAKEIKELIRDSVNKVNDGTSLVNQSGNTLQEIVHAVSKVAEMINEISVAAEQQASGI
CCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVNKAVSQMDEMTQQNAALVEEVSAAGDAMAEQARNMRRQLGFFRTDVQASSAAPLALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
AGGEKRPTKFKASKEEWHEF
ECCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]