Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776625

Identifier: 119776625

GI number: 119776625

Start: 4123967

End: 4124248

Strand: Direct

Name: 119776625

Synonym: Sama_3493

Alternate gene names: NA

Gene position: 4123967-4124248 (Clockwise)

Preceding gene: 119776624

Following gene: 119776626

Centisome position: 95.77

GC content: 51.77

Gene sequence:

>282_bases
ATGTCAGAAAACACGGTAGAGCTCGGAAGCGAGCTGACCATCCGCAATATCCAGCCTATCTACAGCCAGTTAGCAGATCT
GCTGCATCAGGGCAGACCCGTCACCCTGAATGCCGCCAGACTCATCAAGGCAGACACGGCTGGTCTGCAACTGCTGCTGT
GCCTGCAGTCCCATTGTGAAAACAGCAGTATCCCATTGAACTGGAAAGGAATAACTACAGAACTTGTCGCTCAGTTCAAG
CAGATGGGCATGCAACTTCCGGGAATAACCAGTCAAGCGTAA

Upstream 100 bases:

>100_bases
GTCCACAAGAAAAAATCCTTGTAAATGAGGCAACAGTCCAAAATGGCGTCTATCTTTTGTGTGTAAAGGAACTCAGGTCC
AGCACTCAAGGGATGCCTCT

Downstream 100 bases:

>100_bases
AAGGACAACAACCTATGAAGAAGATTCTTGCCGTTGATGATTCGGCCTCAATGAGACAAATGGTGGGGTTTACGCTGAAA
ACCGCCGGATTTGATGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSENTVELGSELTIRNIQPIYSQLADLLHQGRPVTLNAARLIKADTAGLQLLLCLQSHCENSSIPLNWKGITTELVAQFK
QMGMQLPGITSQA

Sequences:

>Translated_93_residues
MSENTVELGSELTIRNIQPIYSQLADLLHQGRPVTLNAARLIKADTAGLQLLLCLQSHCENSSIPLNWKGITTELVAQFK
QMGMQLPGITSQA
>Mature_92_residues
SENTVELGSELTIRNIQPIYSQLADLLHQGRPVTLNAARLIKADTAGLQLLLCLQSHCENSSIPLNWKGITTELVAQFKQ
MGMQLPGITSQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10174; Mature: 10043

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENTVELGSELTIRNIQPIYSQLADLLHQGRPVTLNAARLIKADTAGLQLLLCLQSHCE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHCCHHHHHHHHHHHHHCC
NSSIPLNWKGITTELVAQFKQMGMQLPGITSQA
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SENTVELGSELTIRNIQPIYSQLADLLHQGRPVTLNAARLIKADTAGLQLLLCLQSHCE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHCCHHHHHHHHHHHHHCC
NSSIPLNWKGITTELVAQFKQMGMQLPGITSQA
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA