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The map label for this gene is lrp [C]

Identifier: 119776591

GI number: 119776591

Start: 4088507

End: 4088938

Strand: Direct

Name: lrp [C]

Synonym: Sama_3459

Alternate gene names: 119776591

Gene position: 4088507-4088938 (Clockwise)

Preceding gene: 119776589

Following gene: 119776592

Centisome position: 94.95

GC content: 51.16

Gene sequence:

>432_bases
TTGGATAAGTTTGATCAGGCCATTATTCAGGCCCTGCGCCAGGACGCCAGAAGAAGCATTTCCACTATTGCCGACGAAGT
GAATCTGTCGCGCAGTGCAGTCTCAGAACGTATAAAAAAACTTGAGCAATCCGGCGTTATCCGCGGCTACCAGGTTCTCC
TGTCTGAATCGCAAAAAGAAGGAGTTTCGGCCTACTTTGAAATTCAGCACAAGTGCCCGCGCTGTGCCGATGTGGTGCAC
GTGTTCCACGCGATTCCCGAAGTACTGACCTGTCATGGGATCTCCGGTGATATGGACCTGCTGGTGTATGTCCACGCCCC
ATCCATGCGCCGCCTGCACGAAATCCGCGAATATATCGACACCCATACCGACATTGTCAAAATCAAAACACACGTTGTCA
TGAGTGAGTGGATTAACAATCTCGCCCCCTAA

Upstream 100 bases:

>100_bases
CTTTTCCTGCATTAGGTGGCCTTAAACCGTCATTTTGGCGGTTATTAAAGATAAATCCGGCATTTCGTCGGCAAGCTCAA
ATCATCAAGGAGTTTTCAGG

Downstream 100 bases:

>100_bases
GCCAAACACACAATCAGCGCAGGTGAGTATGGCATTCAGCACTCTGAGGGCTGGGAGTGCACGCATGATTCATCTGGCGA
GCCCCTCATACTCACTCCGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AsnC Family; Transcriptional Regulator; Leucine-Responsive Regulatory Protein; AsnC Family Regulatory Protein; Transcription Regulator AsnC; Transcriptional Regulator Asnc Family; Transcriptional Regulator AsnC/Lrp Family; Transcription Regulator Protein; Lrp/AsnC Family Transcriptional Regulator; HTH-Type Transcriptional Regulator; Transcription Regulator AsnC-Type; AsnC Family Regulatory Helix-Turn-Helix; Lrp/AsnC-Like Transcriptional Regulator; Transcriptional Regulators~Psort Location; AsnC/Lrp Family Regulatory Protein; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Lrp Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator Lrp-AsnC Family; AsnC-Family Transcriptional Regulator; Transcriptional Regulatory Protein Asnc Family; Transcriptional Regulator Protein AsnC Family; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; Transcription Regulator; Regulatory Proteins AsnC/Lrp; AsnC-Family Transcriptional Regulatory Protein; AsnC Family Transcriptional Regulatory Protein; Transcriptional Regulator AsnC Family Protein; Lpr Family Transcriptional Regulator

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDKFDQAIIQALRQDARRSISTIADEVNLSRSAVSERIKKLEQSGVIRGYQVLLSESQKEGVSAYFEIQHKCPRCADVVH
VFHAIPEVLTCHGISGDMDLLVYVHAPSMRRLHEIREYIDTHTDIVKIKTHVVMSEWINNLAP

Sequences:

>Translated_143_residues
MDKFDQAIIQALRQDARRSISTIADEVNLSRSAVSERIKKLEQSGVIRGYQVLLSESQKEGVSAYFEIQHKCPRCADVVH
VFHAIPEVLTCHGISGDMDLLVYVHAPSMRRLHEIREYIDTHTDIVKIKTHVVMSEWINNLAP
>Mature_143_residues
MDKFDQAIIQALRQDARRSISTIADEVNLSRSAVSERIKKLEQSGVIRGYQVLLSESQKEGVSAYFEIQHKCPRCADVVH
VFHAIPEVLTCHGISGDMDLLVYVHAPSMRRLHEIREYIDTHTDIVKIKTHVVMSEWINNLAP

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16294; Mature: 16294

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFDQAIIQALRQDARRSISTIADEVNLSRSAVSERIKKLEQSGVIRGYQVLLSESQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVSAYFEIQHKCPRCADVVHVFHAIPEVLTCHGISGDMDLLVYVHAPSMRRLHEIREYID
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHH
THTDIVKIKTHVVMSEWINNLAP
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKFDQAIIQALRQDARRSISTIADEVNLSRSAVSERIKKLEQSGVIRGYQVLLSESQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVSAYFEIQHKCPRCADVVHVFHAIPEVLTCHGISGDMDLLVYVHAPSMRRLHEIREYID
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHH
THTDIVKIKTHVVMSEWINNLAP
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA