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The map label for this gene is ybeQ [C]

Identifier: 119776583

GI number: 119776583

Start: 4081288

End: 4082715

Strand: Reverse

Name: ybeQ [C]

Synonym: Sama_3451

Alternate gene names: 119776583

Gene position: 4082715-4081288 (Counterclockwise)

Preceding gene: 119776584

Following gene: 119776580

Centisome position: 94.81

GC content: 59.24

Gene sequence:

>1428_bases
ATGGCTGGCAAGGGACTGACAGATACCGCGATGATAGCGGCCTTCGATGCCGGCCTTGCCGAGGAATATCGCCGCGCCAG
ACGCTTTGCCAAAGATGTTCCTGCCCAGGCGCTGCTGACACTGCGCAGCGCCCTCTACAAGCTCACAGGTATTCTGGCCG
CTGGCCGCCTGACCTTCGACAGCCCCAATCTTTACAACCGCATCGAGTCCTTGTCGCAGGCGCGTTTGCTGGGGGTACGT
CAGGCTCGCGCCATGCACAGGCTCAGGGCCGACGGTAACCGTGGTGCCCATCCGGAAAAATATCATCTCGATGAGGCGTC
ACTGCTTGCACTGGCAAACAAGGCGCTGCTGAATTTTTGTCAGCTGGTGTCCGAGTTGTCGGGCAAGGGGGCGGATACAG
CCCACTTCGAATTTGAGCCTCTTGATGATCTCAGTAACAGAGAACTCTGCTACAGGGCCGTGATGGCGGATGATGCCGAG
GCACAGTATCTGCTGGGGATGGCCTTTAAAACCCAGGGCTTACTGGCACGGGATGCGCAGCAAGGCTTGGTTGATGAGCC
CACAACGTCAGCGGTGCTGGCGAAGGCGCAATATTGGTTTGCCCAGGCGGCAAGCAGCCTTGCTGTGGCCCGCTATGAAT
TGGGTGTGGCGTTTCTCCATGCATATCAGGGACCAGCAGATGAGGCCAAAGGTATTTCCCTGATTGCCGATGCTGCCACT
CAAGGGGTGGAAGATGCCAAGGCCTTGCTGGGATACTTTGCCCTGACGGGGCAGGGTATGGTCGTGGATCTGCCGAGGGC
CGAGTCTCTGCTGACCGAGGCCACACAAGCCGGCCATACCGAGGCCGAAGCTAACCTTGGGGTACTCAGGTACCAGCAGG
GGCGCCTCGAAGAAGCATACCGGCATATCGAATCGGCGGCGCGGGGTGGTTTCCCACAGGCGCAGTATCATGTGTCCCTG
ATGTTGAGTCGGGGTGAAGGCTGCCGGATTGACCCCCTTGGTGCCGAGCGCTGGCTTGCTGAGGCCGCCGAGCAAGGGCA
GCTTGATGCCATGTTGCTGCGTGCCCGGCATATGCTCCATGATGAAGCCACCCTTGGCAGTGATTTAACCCTCGCCGAAG
ATTATCTGCGTAAAGTCATCCGATTCAGTCGGAATGTGCCCGCCATGCTGGAGCTGTCTATGGCCCTGGCCGATGGCATT
CTCGGACGCATCGATGTGGTGGAGGCGGCAGCCCTGCTCGGTGAGGCTGCACGGCTTGCCAGTGATGAAGAGCTCGCCAT
CATTACGCCGCTGTGGCAATCCCTGGCGACCCAGATTGAAAATGTGCTGCCGCTTTCTGTTAATGCAGACGAAAAAAAGG
CCCTGGAGAGAGCCAAAGAACTGCTGTTGGAGATGCCGGGGCAGGGTGAGAGTGCCCCGGAGCAGTGA

Upstream 100 bases:

>100_bases
GATTGTAGATGCAGGATTTTCCTTTATTGCTCTGTTTGTTAACGTGGCGCTGTTCCGCCTCTACATGGTTAACAGAACTC
AGGCTTAAGGAGTAAAGCGG

Downstream 100 bases:

>100_bases
TATCTTTACTTGCCATTACTCGGTAGGATCGTGTTCGAAGGTGCGTCCCTGATGGGGGCGCGGGCGGAACAGATCACGGT
CACGAAAGCGAACAAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Sel1 Repeat-Containing Protein; TPR Repeat-Containing SEL1 Subfamily Protein; TPR Repeat Protein; Sel1 Repeat Family Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Protein; SecC Motif-Containing Protein; Sel1-Like Repeat Protein; Sel1 Domain Protein Repeat-Containing Protein

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MAGKGLTDTAMIAAFDAGLAEEYRRARRFAKDVPAQALLTLRSALYKLTGILAAGRLTFDSPNLYNRIESLSQARLLGVR
QARAMHRLRADGNRGAHPEKYHLDEASLLALANKALLNFCQLVSELSGKGADTAHFEFEPLDDLSNRELCYRAVMADDAE
AQYLLGMAFKTQGLLARDAQQGLVDEPTTSAVLAKAQYWFAQAASSLAVARYELGVAFLHAYQGPADEAKGISLIADAAT
QGVEDAKALLGYFALTGQGMVVDLPRAESLLTEATQAGHTEAEANLGVLRYQQGRLEEAYRHIESAARGGFPQAQYHVSL
MLSRGEGCRIDPLGAERWLAEAAEQGQLDAMLLRARHMLHDEATLGSDLTLAEDYLRKVIRFSRNVPAMLELSMALADGI
LGRIDVVEAAALLGEAARLASDEELAIITPLWQSLATQIENVLPLSVNADEKKALERAKELLLEMPGQGESAPEQ

Sequences:

>Translated_475_residues
MAGKGLTDTAMIAAFDAGLAEEYRRARRFAKDVPAQALLTLRSALYKLTGILAAGRLTFDSPNLYNRIESLSQARLLGVR
QARAMHRLRADGNRGAHPEKYHLDEASLLALANKALLNFCQLVSELSGKGADTAHFEFEPLDDLSNRELCYRAVMADDAE
AQYLLGMAFKTQGLLARDAQQGLVDEPTTSAVLAKAQYWFAQAASSLAVARYELGVAFLHAYQGPADEAKGISLIADAAT
QGVEDAKALLGYFALTGQGMVVDLPRAESLLTEATQAGHTEAEANLGVLRYQQGRLEEAYRHIESAARGGFPQAQYHVSL
MLSRGEGCRIDPLGAERWLAEAAEQGQLDAMLLRARHMLHDEATLGSDLTLAEDYLRKVIRFSRNVPAMLELSMALADGI
LGRIDVVEAAALLGEAARLASDEELAIITPLWQSLATQIENVLPLSVNADEKKALERAKELLLEMPGQGESAPEQ
>Mature_474_residues
AGKGLTDTAMIAAFDAGLAEEYRRARRFAKDVPAQALLTLRSALYKLTGILAAGRLTFDSPNLYNRIESLSQARLLGVRQ
ARAMHRLRADGNRGAHPEKYHLDEASLLALANKALLNFCQLVSELSGKGADTAHFEFEPLDDLSNRELCYRAVMADDAEA
QYLLGMAFKTQGLLARDAQQGLVDEPTTSAVLAKAQYWFAQAASSLAVARYELGVAFLHAYQGPADEAKGISLIADAATQ
GVEDAKALLGYFALTGQGMVVDLPRAESLLTEATQAGHTEAEANLGVLRYQQGRLEEAYRHIESAARGGFPQAQYHVSLM
LSRGEGCRIDPLGAERWLAEAAEQGQLDAMLLRARHMLHDEATLGSDLTLAEDYLRKVIRFSRNVPAMLELSMALADGIL
GRIDVVEAAALLGEAARLASDEELAIITPLWQSLATQIENVLPLSVNADEKKALERAKELLLEMPGQGESAPEQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51514; Mature: 51383

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKGLTDTAMIAAFDAGLAEEYRRARRFAKDVPAQALLTLRSALYKLTGILAAGRLTFD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEECC
SPNLYNRIESLSQARLLGVRQARAMHRLRADGNRGAHPEKYHLDEASLLALANKALLNFC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH
QLVSELSGKGADTAHFEFEPLDDLSNRELCYRAVMADDAEAQYLLGMAFKTQGLLARDAQ
HHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
QGLVDEPTTSAVLAKAQYWFAQAASSLAVARYELGVAFLHAYQGPADEAKGISLIADAAT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH
QGVEDAKALLGYFALTGQGMVVDLPRAESLLTEATQAGHTEAEANLGVLRYQQGRLEEAY
CCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCCCEEECHHHHHHHH
RHIESAARGGFPQAQYHVSLMLSRGEGCRIDPLGAERWLAEAAEQGQLDAMLLRARHMLH
HHHHHHHCCCCCCHHEEEEEEEECCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
DEATLGSDLTLAEDYLRKVIRFSRNVPAMLELSMALADGILGRIDVVEAAALLGEAARLA
HHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDEELAIITPLWQSLATQIENVLPLSVNADEKKALERAKELLLEMPGQGESAPEQ
CCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AGKGLTDTAMIAAFDAGLAEEYRRARRFAKDVPAQALLTLRSALYKLTGILAAGRLTFD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEECC
SPNLYNRIESLSQARLLGVRQARAMHRLRADGNRGAHPEKYHLDEASLLALANKALLNFC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH
QLVSELSGKGADTAHFEFEPLDDLSNRELCYRAVMADDAEAQYLLGMAFKTQGLLARDAQ
HHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
QGLVDEPTTSAVLAKAQYWFAQAASSLAVARYELGVAFLHAYQGPADEAKGISLIADAAT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH
QGVEDAKALLGYFALTGQGMVVDLPRAESLLTEATQAGHTEAEANLGVLRYQQGRLEEAY
CCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCCCEEECHHHHHHHH
RHIESAARGGFPQAQYHVSLMLSRGEGCRIDPLGAERWLAEAAEQGQLDAMLLRARHMLH
HHHHHHHCCCCCCHHEEEEEEEECCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
DEATLGSDLTLAEDYLRKVIRFSRNVPAMLELSMALADGILGRIDVVEAAALLGEAARLA
HHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDEELAIITPLWQSLATQIENVLPLSVNADEKKALERAKELLLEMPGQGESAPEQ
CCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA