Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776569

Identifier: 119776569

GI number: 119776569

Start: 4068658

End: 4069269

Strand: Direct

Name: 119776569

Synonym: Sama_3437

Alternate gene names: NA

Gene position: 4068658-4069269 (Clockwise)

Preceding gene: 119776568

Following gene: 119776570

Centisome position: 94.48

GC content: 60.29

Gene sequence:

>612_bases
ATGAAACTCTTACCCGTCTTGCTCGCGGCAGGTGGCTCGCGCCGCTTCGAAGGGGTCAAGCTCGCTATGCCGCTGCCTGG
TGGCACCACCTTACTTGGCCGCAGCTTTAACGCGTTGAGCCAGGTGCGCAGCAGCTGCGATACCCAGATCCTGCCGGTGC
AGGTATGCCTCGGTGGCCACGGCGCCACATTAAGGCAACTTTTACCCAAGGATACCGCCATTATCCCCTCCCCCGATTGG
CAGCTGGGGCTTGGCCACAGTATTGCCACAGCCGCGAAAGCGGCGCTCGGCACAGACGCCGACGCCTTGCTGCTGGCACT
GGCCGACCACGCGCTATTGAGCTCTGAAGACTATGAGTCCCTTATCCAAAGTTGGCAGGAGTCCGGTAAAACCACCGCCT
CCTGGTATCTGGATGCCCCCGGTGCACCGGCGATTTTCAACCGTGCCGACTTTGGTGAGCTGACCCGTCTCAGCGGCGAC
AGAGGCGCCAAGGGGATTTTGAAATCTTTGCAAAAACAACAACAACTGGGATGGATGGCGCTACCCGGCGCCAGCATCGA
TATAGACACCCGCGCCGATTTCGGGCGCTTCGTGAGCACAAGGAGCGAGTGA

Upstream 100 bases:

>100_bases
AACTGCCGGCGGATATAGCCCTGTCTATCCTCGCCGCCTGCCAGGCGAGCCTGTTCGGCAAAAGCTCGTCCGTTGGCAAA
TTCAAAAGCGGAGGCCTTGC

Downstream 100 bases:

>100_bases
CCCATGACATCACTTAAAATCAACGGCCGTTTGTTCACCCTGGACGCCGACCCCAAGATGCCGCTCCTGTGGGCGCTCCG
GGATCTGATGGGGTTAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKLLPVLLAAGGSRRFEGVKLAMPLPGGTTLLGRSFNALSQVRSSCDTQILPVQVCLGGHGATLRQLLPKDTAIIPSPDW
QLGLGHSIATAAKAALGTDADALLLALADHALLSSEDYESLIQSWQESGKTTASWYLDAPGAPAIFNRADFGELTRLSGD
RGAKGILKSLQKQQQLGWMALPGASIDIDTRADFGRFVSTRSE

Sequences:

>Translated_203_residues
MKLLPVLLAAGGSRRFEGVKLAMPLPGGTTLLGRSFNALSQVRSSCDTQILPVQVCLGGHGATLRQLLPKDTAIIPSPDW
QLGLGHSIATAAKAALGTDADALLLALADHALLSSEDYESLIQSWQESGKTTASWYLDAPGAPAIFNRADFGELTRLSGD
RGAKGILKSLQKQQQLGWMALPGASIDIDTRADFGRFVSTRSE
>Mature_203_residues
MKLLPVLLAAGGSRRFEGVKLAMPLPGGTTLLGRSFNALSQVRSSCDTQILPVQVCLGGHGATLRQLLPKDTAIIPSPDW
QLGLGHSIATAAKAALGTDADALLLALADHALLSSEDYESLIQSWQESGKTTASWYLDAPGAPAIFNRADFGELTRLSGD
RGAKGILKSLQKQQQLGWMALPGASIDIDTRADFGRFVSTRSE

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21484; Mature: 21484

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLPVLLAAGGSRRFEGVKLAMPLPGGTTLLGRSFNALSQVRSSCDTQILPVQVCLGGH
CCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEEECCC
GATLRQLLPKDTAIIPSPDWQLGLGHSIATAAKAALGTDADALLLALADHALLSSEDYES
CHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
LIQSWQESGKTTASWYLDAPGAPAIFNRADFGELTRLSGDRGAKGILKSLQKQQQLGWMA
HHHHHHHCCCEEEEEEEECCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCEEE
LPGASIDIDTRADFGRFVSTRSE
CCCCCEECCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKLLPVLLAAGGSRRFEGVKLAMPLPGGTTLLGRSFNALSQVRSSCDTQILPVQVCLGGH
CCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEEECCC
GATLRQLLPKDTAIIPSPDWQLGLGHSIATAAKAALGTDADALLLALADHALLSSEDYES
CHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
LIQSWQESGKTTASWYLDAPGAPAIFNRADFGELTRLSGDRGAKGILKSLQKQQQLGWMA
HHHHHHHCCCEEEEEEEECCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCEEE
LPGASIDIDTRADFGRFVSTRSE
CCCCCEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA