Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is fct [H]

Identifier: 119776544

GI number: 119776544

Start: 4036983

End: 4039058

Strand: Direct

Name: fct [H]

Synonym: Sama_3412

Alternate gene names: 119776544

Gene position: 4036983-4039058 (Clockwise)

Preceding gene: 119776543

Following gene: 119776545

Centisome position: 93.75

GC content: 54.91

Gene sequence:

>2076_bases
ATGTCCAGCTCCAGCCTCTTCAGATTGACCGGGCTGTCTGTGGCACTGATGTCAGCCATGGCTGCCCATGGTCAGGACAC
TTCTGACATCAGTATCGAAAGGATGATCGTCACCACTAAAGCCACTGCACCTTCCACCACCAAGGGCGACTTCAGCTTGC
TGAAGGCACCGCAGAACATTCAGATCTTGTCCAAAAATTTCCTTGATGATCAGGGTGTCGTGCATTTGGAAGACGCGTTG
AAGAACGTGGCCGGGATACAACCCGGTGGTTACTATCAGGGTTACGACTACTTCCGAATCCGGGGTTTCGATGCCTCGCA
AAACATCTATCTCGACGGTCTGCGCCTGAATGACAATGGCCTGGGTGCCAATGTGGAGCAGTCGAATCTCGAAACCCTTG
AGGTGATGAAAGGGCCTTCCTCCACTCTTTACGGTGCAGGTGCCATCTCGGGTATGGTGAACCTGGTGACCAAACGGCCA
ACCCAAACCGACATGGGCAGCGTAAGCTTGCAGGGTGGCAATCTGGGCTACCGTGAGCTGGATGCCGACATTAACCGCGT
ACTGAGCGACGATGGTGACATCTTCGGCCGTGTTGGTCTGGCGTACCGAGAAGCGGCCAACAGCGTGGACCATATTGACG
GACAACATCGCTTCTTTATCGCGCCGTCGCTCACCTTTAATCTGGGTGAAGACGCTGCTCTGACCCTGCTCACCAGCTAC
ACAAAAGACGATAATCAGTTAGGCATGCCACTGCCTGCCATGGGAACTGTGCTGCCGTCACCGCTGGGTGAGCTGGATAA
GGATCTCTTTTACGGCAACATCAAAGATCCCGGTGCCATCAACGACGAAACCTATCGTCTGGGTTACGAGCTGCGCTGGG
ACCTGACCGACAACTTGCAGCTGCGTCAGAATGTCCGATTCCAGGATGCCTCCAGCGATTGGCACAATCTCTACTATCCC
AGCAGTTACGATGCCGACACCGGCGATTTGAACCTGTACAAATTCAGCTATCGCACCCAGTGGAAAACCTGGGCACTGGA
CACCGGACTCAATGGCCGCGTTATGCTGGGTGAAACCGAGCACCTGTTTACCGCAGGGGTGGATATCTTTATGTCGGATC
TCTACACCAGCGGCGCCCTGGGCAGTGATTTCCCCACCATCAATCTCTACCAGCCGGATTACAGTGTCTTCCCTGATACC
GAGGTCAATCAGTTCGGCCCCGAAAGCAAGGTTGAGAATCGTATTCTGGGTCTGTACGCCCAGGATCAAATTAATCTGGG
AGAGCACTGGAGCTTTACACTGGGTGCCCGTTTCGATCGCTACAAGCAAGCCTACGTGGAAGACTACGAAACCAAACTGA
GCCCGAGAGCCGGTGTCAGCTACGCTTTCAACGACGATTGGGTGGCCTTTGCCAGCTATTCTGAAGCCTTCACCCCCCAG
TCCTATGTGGACAGTAATGGCAAGGTTCTCGACCCGGAAGAAGGCCAGCAGTGGGAACTGGGCCTTAAGAGCCGCGCCTT
TAACGGTGACCTGAATGCCACTGTGTCCCTCTATGAGCTGACCAAAAAGAACATAGCGCTGGCCAATGTGGATGCCGGTG
GCAACTTTACCTACTCCGCATCCGGCGAGCTGCAAAGTCGTGGCATAGAGCTGGATTTGCAGTGGCTGCTGACACAGGAT
CTGCAGCTGATTGGCCACGGCGCATACACCCATGCCGTCGATACCGAGCACGACAAGTGGGTCGCCAATGTACCCCGTTA
TGCCCTGGGTGGCTGGCTAAAATACAACTTGGATGACATGCTCGATGGTCTGAGCGTGGCGGCCGGTGTCAATCACTACG
GCAAGCAGCAAGGCAACGTACAGGCGGTACTGACTGACAGCAGCGAAGGCGACTTTTACCTGCCAGCCTACACTCTGGTT
GACCTGAACCTGACCTACAGCTGGGACCAGTACGATCTGCGCTTTATCGTCAACAACCTGACCGATGAAGACTACTTCTC
TGGCTCCGACAGTCTGCTGCGGGTACTGCCGGGCAGCGGCCGTGAAGTGAAACTCAGCTTCACTGCCAACTGGTAA

Upstream 100 bases:

>100_bases
TCTGTGTCGCAATCTTTTTGCATACACTCAATTTTTAATGATAATTATTTTTATTTAGTTTAGTATCCTTGCGAATTTAC
CACTCGAGGATACTAAAATC

Downstream 100 bases:

>100_bases
TCCCATGCGCAGATTACTGTGGAAATGGCACGGATTGGCAGGGCTGATTACCGCCCTGCCGCTCTTTGTTATCGCACTGA
CGGGCAGCTTGCTGGTGTTT

Product: ferrichrome iron receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 691; Mature: 690

Protein sequence:

>691_residues
MSSSSLFRLTGLSVALMSAMAAHGQDTSDISIERMIVTTKATAPSTTKGDFSLLKAPQNIQILSKNFLDDQGVVHLEDAL
KNVAGIQPGGYYQGYDYFRIRGFDASQNIYLDGLRLNDNGLGANVEQSNLETLEVMKGPSSTLYGAGAISGMVNLVTKRP
TQTDMGSVSLQGGNLGYRELDADINRVLSDDGDIFGRVGLAYREAANSVDHIDGQHRFFIAPSLTFNLGEDAALTLLTSY
TKDDNQLGMPLPAMGTVLPSPLGELDKDLFYGNIKDPGAINDETYRLGYELRWDLTDNLQLRQNVRFQDASSDWHNLYYP
SSYDADTGDLNLYKFSYRTQWKTWALDTGLNGRVMLGETEHLFTAGVDIFMSDLYTSGALGSDFPTINLYQPDYSVFPDT
EVNQFGPESKVENRILGLYAQDQINLGEHWSFTLGARFDRYKQAYVEDYETKLSPRAGVSYAFNDDWVAFASYSEAFTPQ
SYVDSNGKVLDPEEGQQWELGLKSRAFNGDLNATVSLYELTKKNIALANVDAGGNFTYSASGELQSRGIELDLQWLLTQD
LQLIGHGAYTHAVDTEHDKWVANVPRYALGGWLKYNLDDMLDGLSVAAGVNHYGKQQGNVQAVLTDSSEGDFYLPAYTLV
DLNLTYSWDQYDLRFIVNNLTDEDYFSGSDSLLRVLPGSGREVKLSFTANW

Sequences:

>Translated_691_residues
MSSSSLFRLTGLSVALMSAMAAHGQDTSDISIERMIVTTKATAPSTTKGDFSLLKAPQNIQILSKNFLDDQGVVHLEDAL
KNVAGIQPGGYYQGYDYFRIRGFDASQNIYLDGLRLNDNGLGANVEQSNLETLEVMKGPSSTLYGAGAISGMVNLVTKRP
TQTDMGSVSLQGGNLGYRELDADINRVLSDDGDIFGRVGLAYREAANSVDHIDGQHRFFIAPSLTFNLGEDAALTLLTSY
TKDDNQLGMPLPAMGTVLPSPLGELDKDLFYGNIKDPGAINDETYRLGYELRWDLTDNLQLRQNVRFQDASSDWHNLYYP
SSYDADTGDLNLYKFSYRTQWKTWALDTGLNGRVMLGETEHLFTAGVDIFMSDLYTSGALGSDFPTINLYQPDYSVFPDT
EVNQFGPESKVENRILGLYAQDQINLGEHWSFTLGARFDRYKQAYVEDYETKLSPRAGVSYAFNDDWVAFASYSEAFTPQ
SYVDSNGKVLDPEEGQQWELGLKSRAFNGDLNATVSLYELTKKNIALANVDAGGNFTYSASGELQSRGIELDLQWLLTQD
LQLIGHGAYTHAVDTEHDKWVANVPRYALGGWLKYNLDDMLDGLSVAAGVNHYGKQQGNVQAVLTDSSEGDFYLPAYTLV
DLNLTYSWDQYDLRFIVNNLTDEDYFSGSDSLLRVLPGSGREVKLSFTANW
>Mature_690_residues
SSSSLFRLTGLSVALMSAMAAHGQDTSDISIERMIVTTKATAPSTTKGDFSLLKAPQNIQILSKNFLDDQGVVHLEDALK
NVAGIQPGGYYQGYDYFRIRGFDASQNIYLDGLRLNDNGLGANVEQSNLETLEVMKGPSSTLYGAGAISGMVNLVTKRPT
QTDMGSVSLQGGNLGYRELDADINRVLSDDGDIFGRVGLAYREAANSVDHIDGQHRFFIAPSLTFNLGEDAALTLLTSYT
KDDNQLGMPLPAMGTVLPSPLGELDKDLFYGNIKDPGAINDETYRLGYELRWDLTDNLQLRQNVRFQDASSDWHNLYYPS
SYDADTGDLNLYKFSYRTQWKTWALDTGLNGRVMLGETEHLFTAGVDIFMSDLYTSGALGSDFPTINLYQPDYSVFPDTE
VNQFGPESKVENRILGLYAQDQINLGEHWSFTLGARFDRYKQAYVEDYETKLSPRAGVSYAFNDDWVAFASYSEAFTPQS
YVDSNGKVLDPEEGQQWELGLKSRAFNGDLNATVSLYELTKKNIALANVDAGGNFTYSASGELQSRGIELDLQWLLTQDL
QLIGHGAYTHAVDTEHDKWVANVPRYALGGWLKYNLDDMLDGLSVAAGVNHYGKQQGNVQAVLTDSSEGDFYLPAYTLVD
LNLTYSWDQYDLRFIVNNLTDEDYFSGSDSLLRVLPGSGREVKLSFTANW

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=756, Percent_Identity=27.7777777777778, Blast_Score=208, Evalue=1e-54,
Organism=Escherichia coli, GI1787024, Length=775, Percent_Identity=24.6451612903226, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1787344, Length=283, Percent_Identity=30.3886925795053, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1788478, Length=147, Percent_Identity=31.9727891156463, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 76605; Mature: 76473

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSLFRLTGLSVALMSAMAAHGQDTSDISIERMIVTTKATAPSTTKGDFSLLKAPQNI
CCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCHHEEECCCCE
QILSKNFLDDQGVVHLEDALKNVAGIQPGGYYQGYDYFRIRGFDASQNIYLDGLRLNDNG
EEHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCC
LGANVEQSNLETLEVMKGPSSTLYGAGAISGMVNLVTKRPTQTDMGSVSLQGGNLGYREL
CCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH
DADINRVLSDDGDIFGRVGLAYREAANSVDHIDGQHRFFIAPSLTFNLGEDAALTLLTSY
HHHHHHHHCCCCCEEEHHHHHHHHHCCCHHCCCCCEEEEEECEEEEECCCCCEEEEEEEC
TKDDNQLGMPLPAMGTVLPSPLGELDKDLFYGNIKDPGAINDETYRLGYELRWDLTDNLQ
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEECCCCCCE
LRQNVRFQDASSDWHNLYYPSSYDADTGDLNLYKFSYRTQWKTWALDTGLNGRVMLGETE
ECCCCCEECCCCCCCEEECCCCCCCCCCCEEEEEEEEECCEEEEEEECCCCCEEEECCCC
HLFTAGVDIFMSDLYTSGALGSDFPTINLYQPDYSVFPDTEVNQFGPESKVENRILGLYA
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHCCCHHHHCCEEEEEEE
QDQINLGEHWSFTLGARFDRYKQAYVEDYETKLSPRAGVSYAFNDDWVAFASYSEAFTPQ
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCH
SYVDSNGKVLDPEEGQQWELGLKSRAFNGDLNATVSLYELTKKNIALANVDAGGNFTYSA
HHHCCCCCEECCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEC
SGELQSRGIELDLQWLLTQDLQLIGHGAYTHAVDTEHDKWVANVPRYALGGWLKYNLDDM
CCCHHHCCEEEEEEEHHHHHHHHHCCCCEEECCCCCCCCHHHCCCCHHHCCEEEECHHHH
LDGLSVAAGVNHYGKQQGNVQAVLTDSSEGDFYLPAYTLVDLNLTYSWDQYDLRFIVNNL
HHHHHHHHCCHHHCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEECCCCEEEEEEECC
TDEDYFSGSDSLLRVLPGSGREVKLSFTANW
CCCCCCCCCCCEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
SSSSLFRLTGLSVALMSAMAAHGQDTSDISIERMIVTTKATAPSTTKGDFSLLKAPQNI
CCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCHHEEECCCCE
QILSKNFLDDQGVVHLEDALKNVAGIQPGGYYQGYDYFRIRGFDASQNIYLDGLRLNDNG
EEHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCC
LGANVEQSNLETLEVMKGPSSTLYGAGAISGMVNLVTKRPTQTDMGSVSLQGGNLGYREL
CCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH
DADINRVLSDDGDIFGRVGLAYREAANSVDHIDGQHRFFIAPSLTFNLGEDAALTLLTSY
HHHHHHHHCCCCCEEEHHHHHHHHHCCCHHCCCCCEEEEEECEEEEECCCCCEEEEEEEC
TKDDNQLGMPLPAMGTVLPSPLGELDKDLFYGNIKDPGAINDETYRLGYELRWDLTDNLQ
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEECCCCCCE
LRQNVRFQDASSDWHNLYYPSSYDADTGDLNLYKFSYRTQWKTWALDTGLNGRVMLGETE
ECCCCCEECCCCCCCEEECCCCCCCCCCCEEEEEEEEECCEEEEEEECCCCCEEEECCCC
HLFTAGVDIFMSDLYTSGALGSDFPTINLYQPDYSVFPDTEVNQFGPESKVENRILGLYA
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHCCCHHHHCCEEEEEEE
QDQINLGEHWSFTLGARFDRYKQAYVEDYETKLSPRAGVSYAFNDDWVAFASYSEAFTPQ
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCH
SYVDSNGKVLDPEEGQQWELGLKSRAFNGDLNATVSLYELTKKNIALANVDAGGNFTYSA
HHHCCCCCEECCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEC
SGELQSRGIELDLQWLLTQDLQLIGHGAYTHAVDTEHDKWVANVPRYALGGWLKYNLDDM
CCCHHHCCEEEEEEEHHHHHHHHHCCCCEEECCCCCCCCHHHCCCCHHHCCEEEECHHHH
LDGLSVAAGVNHYGKQQGNVQAVLTDSSEGDFYLPAYTLVDLNLTYSWDQYDLRFIVNNL
HHHHHHHHCCHHHCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEECCCCEEEEEEECC
TDEDYFSGSDSLLRVLPGSGREVKLSFTANW
CCCCCCCCCCCEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]