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The map label for this gene is alsB [C]

Identifier: 119776419

GI number: 119776419

Start: 3905858

End: 3906871

Strand: Reverse

Name: alsB [C]

Synonym: Sama_3287

Alternate gene names: 119776419

Gene position: 3906871-3905858 (Counterclockwise)

Preceding gene: 119776421

Following gene: 119776418

Centisome position: 90.73

GC content: 54.73

Gene sequence:

>1014_bases
ATGCGGCTGTTGTTTATCTTGGGGTTCTGGCTGATTTTTTCCCCTGCTTATGCAAAAACGCCAGTGTTGTTTCTGAATCC
GGGATACAGCAGCGAAAGTTTTTGGGGCGATGTGGATAGCTTGCTTGAGGCAAGCGCCGCCCGCTTGGACATGCAAGTCG
AGACCCTGCACTCAAACCGTAATCACTTCGATATGATACGCCAGGCCTCGGAAGTGGCCGGTCGCGCCAAGCTGCCTGCA
TTCGTGCTGATGGTCAACGAAAAGCACGGCGGTCTTCGGATGCTGGAAGCTTTTTACCTCAAACCCGTTTATATCCAATT
CATCCTCAATGACATCAGTATCGAAGAGCGTCAAAACCTGCTTAAGGATCCCCATTGGCGCACCTACTTGCTGCCGGCGG
TCATCCCGGACAATCAGGATGTAGGCAACCTGACAGCGATGGCCCTGGTGAAAAAACTGGGCGAGCAGCCTGCCCAGTTG
GTGCTGATTTCCGGCGATAAAACCACCCCCGCCTCAGTGGAGCGAACCCAGGGGGCCCTGGCCGTGTTTCAGGCACAGTC
GGATGTCACTGTGGAGCAAACCGTCTATGGGCAGTGGCAGGAAGATAAGGCCTATCAGCAGGCTCAGGTGCTCCTTCAGC
GCTATCCCGCAATAAAAGCGGTATGGACCGCCAACGATCATATGGCCTTTGGAGTCATTCGGGCGCTGAAAGAAAAGCAG
CTTACGCCGGGGAAAGATGTGTTGCTGTCCACCATAAATACCTCACCACAGGTGCTGGCTCTCAGACGAGCCGGGGAAAT
AAATGCCCTGGGCGGAGGGCACTTTCTGGCCGCAGGCATTGCGCTGGCAAATATTCGTCAGTTCAAGGATACCGGCGAGT
ACCCACAGGTGCATATATCACTGTTTCGGTTGTTAGAGCCCGACACGCCGCTGTTTGATGCACTGGAAAAGCGGGACTGG
GCCGGGCTTTTGGATCAGGTGCTTGACCCCACAAGGATACCCGGAAGTCTGTAA

Upstream 100 bases:

>100_bases
ATCAAATGTGAGATTTATGGTTAAATTGACTGTAAAACATAATCAGGGAAGATGCTCCACCGGCACGGATACAAGGCTCT
TGGGAGATTAAGGTGTGCTC

Downstream 100 bases:

>100_bases
GCGCGTTTCCGGTGTCAATCTCATTAGAATAAAGGTGAACTGTTGAGCTCCAGAGTACATTCCATCAGCAGCAAGGTGAC
AGGTATGATCATTGGCGTCA

Product: periplasmic sugar-binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRLLFILGFWLIFSPAYAKTPVLFLNPGYSSESFWGDVDSLLEASAARLDMQVETLHSNRNHFDMIRQASEVAGRAKLPA
FVLMVNEKHGGLRMLEAFYLKPVYIQFILNDISIEERQNLLKDPHWRTYLLPAVIPDNQDVGNLTAMALVKKLGEQPAQL
VLISGDKTTPASVERTQGALAVFQAQSDVTVEQTVYGQWQEDKAYQQAQVLLQRYPAIKAVWTANDHMAFGVIRALKEKQ
LTPGKDVLLSTINTSPQVLALRRAGEINALGGGHFLAAGIALANIRQFKDTGEYPQVHISLFRLLEPDTPLFDALEKRDW
AGLLDQVLDPTRIPGSL

Sequences:

>Translated_337_residues
MRLLFILGFWLIFSPAYAKTPVLFLNPGYSSESFWGDVDSLLEASAARLDMQVETLHSNRNHFDMIRQASEVAGRAKLPA
FVLMVNEKHGGLRMLEAFYLKPVYIQFILNDISIEERQNLLKDPHWRTYLLPAVIPDNQDVGNLTAMALVKKLGEQPAQL
VLISGDKTTPASVERTQGALAVFQAQSDVTVEQTVYGQWQEDKAYQQAQVLLQRYPAIKAVWTANDHMAFGVIRALKEKQ
LTPGKDVLLSTINTSPQVLALRRAGEINALGGGHFLAAGIALANIRQFKDTGEYPQVHISLFRLLEPDTPLFDALEKRDW
AGLLDQVLDPTRIPGSL
>Mature_337_residues
MRLLFILGFWLIFSPAYAKTPVLFLNPGYSSESFWGDVDSLLEASAARLDMQVETLHSNRNHFDMIRQASEVAGRAKLPA
FVLMVNEKHGGLRMLEAFYLKPVYIQFILNDISIEERQNLLKDPHWRTYLLPAVIPDNQDVGNLTAMALVKKLGEQPAQL
VLISGDKTTPASVERTQGALAVFQAQSDVTVEQTVYGQWQEDKAYQQAQVLLQRYPAIKAVWTANDHMAFGVIRALKEKQ
LTPGKDVLLSTINTSPQVLALRRAGEINALGGGHFLAAGIALANIRQFKDTGEYPQVHISLFRLLEPDTPLFDALEKRDW
AGLLDQVLDPTRIPGSL

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790526, Length=136, Percent_Identity=32.3529411764706, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790674, Length=204, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37621; Mature: 37621

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLFILGFWLIFSPAYAKTPVLFLNPGYSSESFWGDVDSLLEASAARLDMQVETLHSNR
CCHHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NHFDMIRQASEVAGRAKLPAFVLMVNEKHGGLRMLEAFYLKPVYIQFILNDISIEERQNL
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LKDPHWRTYLLPAVIPDNQDVGNLTAMALVKKLGEQPAQLVLISGDKTTPASVERTQGAL
HCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCE
AVFQAQSDVTVEQTVYGQWQEDKAYQQAQVLLQRYPAIKAVWTANDHMAFGVIRALKEKQ
EEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
LTPGKDVLLSTINTSPQVLALRRAGEINALGGGHFLAAGIALANIRQFKDTGEYPQVHIS
CCCCHHHHHEECCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
LFRLLEPDTPLFDALEKRDWAGLLDQVLDPTRIPGSL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLLFILGFWLIFSPAYAKTPVLFLNPGYSSESFWGDVDSLLEASAARLDMQVETLHSNR
CCHHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NHFDMIRQASEVAGRAKLPAFVLMVNEKHGGLRMLEAFYLKPVYIQFILNDISIEERQNL
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LKDPHWRTYLLPAVIPDNQDVGNLTAMALVKKLGEQPAQLVLISGDKTTPASVERTQGAL
HCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCE
AVFQAQSDVTVEQTVYGQWQEDKAYQQAQVLLQRYPAIKAVWTANDHMAFGVIRALKEKQ
EEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
LTPGKDVLLSTINTSPQVLALRRAGEINALGGGHFLAAGIALANIRQFKDTGEYPQVHIS
CCCCHHHHHEECCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
LFRLLEPDTPLFDALEKRDWAGLLDQVLDPTRIPGSL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA