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The map label for this gene is hupE [H]

Identifier: 119776404

GI number: 119776404

Start: 3887485

End: 3888069

Strand: Reverse

Name: hupE [H]

Synonym: Sama_3272

Alternate gene names: 119776404

Gene position: 3888069-3887485 (Counterclockwise)

Preceding gene: 119776405

Following gene: 119776398

Centisome position: 90.29

GC content: 55.38

Gene sequence:

>585_bases
ATGAGAAAGGGAATTGGGTTGTGGTGTTTGCTGTTTTCTGCGGGAGCATCGGCCCATGAAGTGGCCCTGGGTGGTGGCTT
CGGTGCCGGTTTTTCCCACCCTGTGCTGGGGTTGGATCATTTGCTCGCCATGCTCAGTGTTGGCATGGTCAGTACCCGAC
TTGGCAGGCACGCCATCTGGCAGGTGCCACTCGCCTTCCTGTGTTTTATGTCCCTTGGTGCCGTGCTTGGTATAACCGAT
ATCGCCTTGCCTCTGGTGGAAGCCGGGATTGCGTTGTCGGTAATGCTGCTTGGGCTCGCCATTGCTTTTAACCGTGCTTT
GCCGCTTTGGCCTGCCATGTTGGCGGTAGCCGTATTTGGCATATTCCATGGTCATGCCCATGGTATGGAAATGCCAACAC
TGGCGAGTCCCTGGCTGTATGGGCTGGGCTTTATCCTCGGCACAGCTACGATACACCTTATCGGTGTATTTACCGGTTTA
TTGCTTGCGATGAAAGAGCGCCGTTATCCCCTGACCCGTATCACCGGAGCTGGCATCGCTGCCATGGGTACCCTGTTCCT
GATAGGCACAGTGTTACCGGGATAA

Upstream 100 bases:

>100_bases
GATTATCTGATTGAGTCAGCAAGGGAAAATGGTTGGGAGGGCGCCGCAAAAATTTACGATCTGGCCGCATAGCTATAAAA
CATTGAAGGAGTCTGGCCCG

Downstream 100 bases:

>100_bases
GCTGGTCGATAATGAAAAACGCCAGGCATTGCCCGGCGTTTTTAACTGTGAGAATTAATGACAGGCTCAGGCCTGCTTGT
CTTCCAACAGTTTTTCCAGT

Product: urease accessory protein UreJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRKGIGLWCLLFSAGASAHEVALGGGFGAGFSHPVLGLDHLLAMLSVGMVSTRLGRHAIWQVPLAFLCFMSLGAVLGITD
IALPLVEAGIALSVMLLGLAIAFNRALPLWPAMLAVAVFGIFHGHAHGMEMPTLASPWLYGLGFILGTATIHLIGVFTGL
LLAMKERRYPLTRITGAGIAAMGTLFLIGTVLPG

Sequences:

>Translated_194_residues
MRKGIGLWCLLFSAGASAHEVALGGGFGAGFSHPVLGLDHLLAMLSVGMVSTRLGRHAIWQVPLAFLCFMSLGAVLGITD
IALPLVEAGIALSVMLLGLAIAFNRALPLWPAMLAVAVFGIFHGHAHGMEMPTLASPWLYGLGFILGTATIHLIGVFTGL
LLAMKERRYPLTRITGAGIAAMGTLFLIGTVLPG
>Mature_194_residues
MRKGIGLWCLLFSAGASAHEVALGGGFGAGFSHPVLGLDHLLAMLSVGMVSTRLGRHAIWQVPLAFLCFMSLGAVLGITD
IALPLVEAGIALSVMLLGLAIAFNRALPLWPAMLAVAVFGIFHGHAHGMEMPTLASPWLYGLGFILGTATIHLIGVFTGL
LLAMKERRYPLTRITGAGIAAMGTLFLIGTVLPG

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 20240; Mature: 20240

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGIGLWCLLFSAGASAHEVALGGGFGAGFSHPVLGLDHLLAMLSVGMVSTRLGRHAIW
CCCCHHHHHHHHHCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVPLAFLCFMSLGAVLGITDIALPLVEAGIALSVMLLGLAIAFNRALPLWPAMLAVAVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IFHGHAHGMEMPTLASPWLYGLGFILGTATIHLIGVFTGLLLAMKERRYPLTRITGAGIA
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHH
AMGTLFLIGTVLPG
HHHHHHHHHHHCCC
>Mature Secondary Structure
MRKGIGLWCLLFSAGASAHEVALGGGFGAGFSHPVLGLDHLLAMLSVGMVSTRLGRHAIW
CCCCHHHHHHHHHCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVPLAFLCFMSLGAVLGITDIALPLVEAGIALSVMLLGLAIAFNRALPLWPAMLAVAVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IFHGHAHGMEMPTLASPWLYGLGFILGTATIHLIGVFTGLLLAMKERRYPLTRITGAGIA
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHH
AMGTLFLIGTVLPG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]