BacMap

Definition	Shewanella amazonensis SB2B chromosome, complete genome.
Accession	NC_008700
Length	4,306,142

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The map label for this gene is rhlB

Identifier: 119776347

GI number: 119776347

Start: 3806926

End: 3808245

Strand: Reverse

Name: rhlB

Synonym: Sama_3215

Alternate gene names: 119776347

Gene position: 3808245-3806926 (Counterclockwise)

Preceding gene: 119776350

Following gene: 119776346

Centisome position: 88.44

GC content: 53.86

Gene sequence:

>1320_bases
ATGAGCGAAACACACTTAACCCAACAAAAATTTGCCGACCTGCCCTTGTGTGACGAGGTCAAACAGGCACTTAACGAAAA
CGGCTTCGAGCATTGCACGCCCATCCAGGCGCTTTCCCTCCCGGTATTGCTTGAGAAAAAAGATATCGCAGGCCAGGCCC
AAACGGGCACCGGCAAGACCCTCGCCTTTTTGGTTGCCACCTTTAACCATCTGCTGACCACTCCGGTACCTGAACATCGC
CAACTGAATCAGCCCCGTGCCATTGTGATGGCGCCAACCCGCGAACTGGCGATTCAGATTGCCAAAGACGCTACCCTGCT
GTCCAAGCACAGCGGCCTAAAGGTGGGTATCGTTTACGGCGGTGAAGGCTATGAAGCCCAGCGCAAGGTGCTGGACAAGG
GCGTGGATGTACTTATTGGTACCACGGGCCGCATCATCGACTATGTGCGTCAGGGCGTGATTAATCTGGGTGCTATCCAA
GCCGTAGTATTGGATGAAGCCGATCGCATGTTCGATCTCGGTTTTATCAAAGATATCCGTTTTCTTTTCAACCGTATGCC
GGGCGCCAAAGAGCGTTTGAACATGCTGTTCTCTGCCACCCTGTCCATGAAGGTGCAGGAGCTGGCGTACGATCACATGA
ATGATCCCGTGAAGGTAGAGATTGCCCCGGAAGAAAAAACTTCCCGCAATATCAAAGAAGAAATCTTTTACCCTTCCATG
GAAGACAAACTCAAGCTGCTGCACTCGCTGATTGAAGAAGACTGGCCCGAAAAGGCCATCGTGTTTGCCAACACCAAATA
TCAGTGTGAAAACCTGTGGGCGAGCCTGGAGGCTGATGGCCACCGTGTGGGCCTGCTGACCGGTGATGTGCCGCAGAAGA
AGCGTTTGAAAATCCTCGAGCAGTTCACCCAGAGTGAACTGGATATTCTGGTGGCCACCGACGTTGCCGCCCGTGGCCTG
CATATTTCTGATGTGTCCCACGTGTACAACTACGATCTGCCCGATGACTGCGAAGACTACGTACACCGTATCGGTCGTAC
CGGTCGAGCCGGTCAGAAAGGGGTATCGGTGAGCTTTGCGTGTGAGGAATATGCCCTTAACCTGCCGGCCATTGAAGATT
ACATCAAGCACAGTATCCCTGTGACTTCTTATGACCGTGATGCCCTGATTGATATTCCCCCTCCGGTGAAAATCCATCGT
AAGCCCCATGCCGGTGGCCGCAACCTGCGCGATCGTAATGGTTCGCCACGTCCGTCTGGCTCCCATCGCAGCGGCAGTGG
TCGTCCTCCCCGTCATGACAGGACCCGCAGACACTCATAA

Upstream 100 bases:

>100_bases
ATTGAGGCGGATTTACAGGAATTCAAGTGCCCACCTACTTGTTGTCGCTATTTCAAACGATCGAGTATCTTATTGCAACC
CTAACTGGTATGCTGCCGCT

Downstream 100 bases:

>100_bases
GACAGCCGTAGATGCAGACACCCGCATACGCAGCAATCACCCTGGGCTCCAACAGTTTTAATATGTTGGTGGCCACCACA
GTGGCCGGAAAGCCCAGGGT

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKTLAFLVATFNHLLTTPVPEHR
QLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYGGEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQ
AVVLDEADRMFDLGFIKDIRFLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM
EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILEQFTQSELDILVATDVAARGL
HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEEYALNLPAIEDYIKHSIPVTSYDRDALIDIPPPVKIHR
KPHAGGRNLRDRNGSPRPSGSHRSGSGRPPRHDRTRRHS

Sequences:

>Translated_439_residues
MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKTLAFLVATFNHLLTTPVPEHR
QLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYGGEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQ
AVVLDEADRMFDLGFIKDIRFLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM
EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILEQFTQSELDILVATDVAARGL
HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEEYALNLPAIEDYIKHSIPVTSYDRDALIDIPPPVKIHR
KPHAGGRNLRDRNGSPRPSGSHRSGSGRPPRHDRTRRHS
>Mature_438_residues
SETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKTLAFLVATFNHLLTTPVPEHRQ
LNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYGGEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQA
VVLDEADRMFDLGFIKDIRFLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSME
DKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILEQFTQSELDILVATDVAARGLH
ISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEEYALNLPAIEDYIKHSIPVTSYDRDALIDIPPPVKIHRK
PHAGGRNLRDRNGSPRPSGSHRSGSGRPPRHDRTRRHS

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Homo sapiens, GI222352149, Length=414, Percent_Identity=35.9903381642512, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=36.4130434782609, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI41327771, Length=399, Percent_Identity=35.3383458646617, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=36.3143631436314, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=36.3143631436314, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI148613856, Length=344, Percent_Identity=38.6627906976744, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI38201710, Length=344, Percent_Identity=38.6627906976744, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=35.3276353276353, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=35.3276353276353, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=37.5, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=33.3333333333333, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI55749865, Length=359, Percent_Identity=34.8189415041783, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI224593278, Length=384, Percent_Identity=34.6354166666667, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=32.5520833333333, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI7661920, Length=372, Percent_Identity=33.0645161290323, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=36.3636363636364, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=33.4224598930481, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI51094101, Length=365, Percent_Identity=32.3287671232877, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI164419743, Length=365, Percent_Identity=32.3287671232877, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI50659095, Length=426, Percent_Identity=31.924882629108, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI164664518, Length=378, Percent_Identity=31.4814814814815, Blast_Score=189, Evalue=7e-48,
Organism=Homo sapiens, GI13129006, Length=378, Percent_Identity=32.2751322751323, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=32.122905027933, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=32.122905027933, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI31542656, Length=403, Percent_Identity=33.2506203473945, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=32.6815642458101, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI41327779, Length=389, Percent_Identity=33.1619537275064, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI41327776, Length=371, Percent_Identity=30.9973045822102, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI188035877, Length=353, Percent_Identity=30.3116147308782, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=32.9758713136729, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=31.5363881401617, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=30.9973045822102, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI17505907, Length=381, Percent_Identity=31.758530183727, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI13514831, Length=396, Percent_Identity=29.040404040404, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=32.9758713136729, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=29.1005291005291, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=29.1005291005291, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=31.8181818181818, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI164419732, Length=363, Percent_Identity=31.404958677686, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI38327634, Length=344, Percent_Identity=31.3953488372093, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI256223453, Length=361, Percent_Identity=29.0858725761773, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=31.7220543806647, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=30.1790281329923, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI9506931, Length=404, Percent_Identity=28.960396039604, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI9966805, Length=318, Percent_Identity=29.2452830188679, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.3609467455621, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI20336298, Length=219, Percent_Identity=36.0730593607306, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI154759257, Length=412, Percent_Identity=26.4563106796117, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1790214, Length=426, Percent_Identity=65.2582159624413, Blast_Score=579, Evalue=1e-166,
Organism=Escherichia coli, GI1787016, Length=387, Percent_Identity=37.7260981912145, Blast_Score=265, Evalue=5e-72,
Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=39.0835579514825, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1788930, Length=365, Percent_Identity=36.1643835616438, Blast_Score=228, Evalue=8e-61,
Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=35.5932203389831, Blast_Score=213, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=39.9449035812672, Blast_Score=241, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=39.9449035812672, Blast_Score=241, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=39.9449035812672, Blast_Score=241, Evalue=6e-64,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=38.8429752066116, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI32565321, Length=368, Percent_Identity=36.6847826086957, Blast_Score=220, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=437, Percent_Identity=32.2654462242563, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17552642, Length=427, Percent_Identity=33.0210772833724, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=343, Percent_Identity=37.3177842565598, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71995724, Length=373, Percent_Identity=33.2439678284182, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI17507121, Length=373, Percent_Identity=33.2439678284182, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=33.1550802139037, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=34.9862258953168, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=33.0708661417323, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=343, Percent_Identity=34.402332361516, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17507877, Length=382, Percent_Identity=34.2931937172775, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=34.1145833333333, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17537549, Length=349, Percent_Identity=36.676217765043, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=387, Percent_Identity=32.5581395348837, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI115532548, Length=385, Percent_Identity=32.4675324675325, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17509811, Length=379, Percent_Identity=32.4538258575198, Blast_Score=191, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=33.1550802139037, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=32.258064516129, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=31.4606741573034, Blast_Score=177, Evalue=9e-45,
Organism=Caenorhabditis elegans, GI71999644, Length=356, Percent_Identity=31.4606741573034, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=30.2139037433155, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17505370, Length=361, Percent_Identity=34.6260387811634, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=31.3775510204082, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI17536099, Length=386, Percent_Identity=31.8652849740933, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17536101, Length=386, Percent_Identity=31.8652849740933, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17536103, Length=386, Percent_Identity=31.8652849740933, Blast_Score=158, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI193208216, Length=361, Percent_Identity=31.8559556786704, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI71990816, Length=356, Percent_Identity=32.8651685393258, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=27.5590551181102, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=31.1827956989247, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI193206561, Length=360, Percent_Identity=29.7222222222222, Blast_Score=148, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=25, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=28.1842818428184, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17556951, Length=353, Percent_Identity=26.628895184136, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=382, Percent_Identity=26.1780104712042, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=27.5757575757576, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=30.7692307692308, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=44.3298969072165, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17557982, Length=371, Percent_Identity=23.7196765498652, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=38.9972144846797, Blast_Score=246, Evalue=5e-66,
Organism=Saccharomyces cerevisiae, GI6324778, Length=394, Percent_Identity=36.0406091370558, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6324217, Length=385, Percent_Identity=35.8441558441558, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6321360, Length=395, Percent_Identity=35.6962025316456, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=35.4570637119114, Blast_Score=213, Evalue=7e-56,
Organism=Saccharomyces cerevisiae, GI6320041, Length=396, Percent_Identity=30.5555555555556, Blast_Score=196, Evalue=6e-51,
Organism=Saccharomyces cerevisiae, GI6321856, Length=390, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320449, Length=385, Percent_Identity=32.987012987013, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=34.3575418994413, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=388, Percent_Identity=34.020618556701, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=31.7333333333333, Blast_Score=186, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6322912, Length=357, Percent_Identity=34.1736694677871, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6322323, Length=357, Percent_Identity=34.1736694677871, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6324620, Length=377, Percent_Identity=32.0954907161804, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=396, Percent_Identity=31.3131313131313, Blast_Score=166, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6321267, Length=366, Percent_Identity=33.0601092896175, Blast_Score=166, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6320173, Length=448, Percent_Identity=28.125, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=33.0645161290323, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=28.9325842696629, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=29.7297297297297, Blast_Score=157, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6319714, Length=357, Percent_Identity=28.5714285714286, Blast_Score=152, Evalue=9e-38,
Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=27.7511961722488, Blast_Score=139, Evalue=8e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=431, Percent_Identity=24.3619489559165, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6322876, Length=445, Percent_Identity=27.6404494382022, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324366, Length=351, Percent_Identity=27.0655270655271, Blast_Score=110, Evalue=4e-25,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=37.2972972972973, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=37.037037037037, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI21356161, Length=376, Percent_Identity=37.7659574468085, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI24644479, Length=376, Percent_Identity=36.1702127659575, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI281361218, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644481, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644483, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644487, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI45551833, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644485, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=35.4748603351955, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI21355075, Length=371, Percent_Identity=36.6576819407008, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24584994, Length=370, Percent_Identity=35.4054054054054, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=36.8421052631579, Blast_Score=212, Evalue=3e-55,
Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=35.5932203389831, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24642151, Length=349, Percent_Identity=37.2492836676218, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=33.6021505376344, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24585582, Length=420, Percent_Identity=32.8571428571429, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=31.5642458100559, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI24642822, Length=415, Percent_Identity=32.289156626506, Blast_Score=188, Evalue=5e-48,
Organism=Drosophila melanogaster, GI28575014, Length=390, Percent_Identity=29.7435897435897, Blast_Score=180, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24582080, Length=381, Percent_Identity=32.2834645669291, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24582078, Length=381, Percent_Identity=32.2834645669291, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI17136248, Length=381, Percent_Identity=32.2834645669291, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24582075, Length=381, Percent_Identity=32.2834645669291, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=30.0268096514745, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=32.9608938547486, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=32.9608938547486, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=32.9608938547486, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI20130173, Length=431, Percent_Identity=31.0904872389791, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI28571808, Length=342, Percent_Identity=34.5029239766082, Blast_Score=171, Evalue=8e-43,
Organism=Drosophila melanogaster, GI28571809, Length=342, Percent_Identity=34.5029239766082, Blast_Score=171, Evalue=8e-43,
Organism=Drosophila melanogaster, GI24583281, Length=363, Percent_Identity=28.9256198347107, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=28.8461538461538, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=33.8607594936709, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=32.8083989501312, Blast_Score=163, Evalue=3e-40,
Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.6406685236769, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI17136814, Length=346, Percent_Identity=31.2138728323699, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI19920478, Length=336, Percent_Identity=31.25, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=28.7878787878788, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI18859659, Length=436, Percent_Identity=27.7522935779816, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI28571338, Length=436, Percent_Identity=27.7522935779816, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=29.9694189602446, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=26.491646778043, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24640164, Length=341, Percent_Identity=23.1671554252199, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHLB_SHEAM (A1SAL1)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_929087.1
- ProteinModelPortal:   A1SAL1
- SMR:   A1SAL1
- STRING:   A1SAL1
- GeneID:   4605462
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_3215
- NMPDR:   fig|326297.7.peg.3027
- eggNOG:   COG0513
- HOGENOM:   HBG737336
- OMA:   HELERQY
- PhylomeDB:   A1SAL1
- ProtClustDB:   PRK04837
- HAMAP:   MF_00661
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014
- SMART:   SM00487
- SMART:   SM00490

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C

EC number: =3.6.4.13

Molecular weight: Translated: 49115; Mature: 48984

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKT
CCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCHH
LAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYG
HHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCHHHHHHHHHCHHHHHHCCCCEEEEEEC
GEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIR
CCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHH
FLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHCCCCH
EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILE
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
QFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA
HHHHHHCCEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIEDYIKHSIPVTSYDRDALIDIPPPVKIHRKPHAGGRNLRDRNGSPRPSG
HHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
SHRSGSGRPPRHDRTRRHS
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKT
CCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCHH
LAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYG
HHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCHHHHHHHHHCHHHHHHCCCCEEEEEEC
GEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIR
CCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHH
FLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHCCCCH
EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILE
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
QFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA
HHHHHHCCEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIEDYIKHSIPVTSYDRDALIDIPPPVKIHRKPHAGGRNLRDRNGSPRPSG
HHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
SHRSGSGRPPRHDRTRRHS
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA