Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776331

Identifier: 119776331

GI number: 119776331

Start: 3790687

End: 3790935

Strand: Reverse

Name: 119776331

Synonym: Sama_3199

Alternate gene names: NA

Gene position: 3790935-3790687 (Counterclockwise)

Preceding gene: 119776345

Following gene: 119776330

Centisome position: 88.04

GC content: 51.0

Gene sequence:

>249_bases
ATGGAAGCTTTGAACATGACAGAAGTCGTTGGCTATATGGCCTCGGTGATGGTCGCTATCTCGCTGATGATGAAAGATAT
TATCTGGCTCAGATGGCTGAACTTCGTCGGCTGCAGCCTGTTTGTTGCCTACGGTGTTGCCATCACGGCCTGGCCAGTGG
CGGGCATGAATGCTTTCGTTGCCTGTATCAACATTTACCATCTCTTCAAGATCTACCGCGCCAAGACGCAAAAGCCCGTT
GTAGCCTGA

Upstream 100 bases:

>100_bases
TCGCCAGTCCCATTCCAGTTTCAATTAACAAATCGCTTTAGGGGCACGGACCCCCCAGTAAGCTCAGGGAAGGCAGAGGG
CCTTATATCGAGGTGCCTTT

Downstream 100 bases:

>100_bases
GTTTCGCCCCGGCGAATGTCATAAAAGTGTCGGGTGGGTGTCACCTGCCCGTCACGCATCCCAGCTAGCATTCGAGACAT
CCTGGATAAATCCTGTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MEALNMTEVVGYMASVMVAISLMMKDIIWLRWLNFVGCSLFVAYGVAITAWPVAGMNAFVACINIYHLFKIYRAKTQKPV
VA

Sequences:

>Translated_82_residues
MEALNMTEVVGYMASVMVAISLMMKDIIWLRWLNFVGCSLFVAYGVAITAWPVAGMNAFVACINIYHLFKIYRAKTQKPV
VA
>Mature_82_residues
MEALNMTEVVGYMASVMVAISLMMKDIIWLRWLNFVGCSLFVAYGVAITAWPVAGMNAFVACINIYHLFKIYRAKTQKPV
VA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019629 [H]

Pfam domain/function: PF10688 Imp-YgjV [H]

EC number: NA

Molecular weight: Translated: 9193; Mature: 9193

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
8.5 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALNMTEVVGYMASVMVAISLMMKDIIWLRWLNFVGCSLFVAYGVAITAWPVAGMNAFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACINIYHLFKIYRAKTQKPVVA
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEALNMTEVVGYMASVMVAISLMMKDIIWLRWLNFVGCSLFVAYGVAITAWPVAGMNAFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACINIYHLFKIYRAKTQKPVVA
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]