Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is zraS [C]

Identifier: 119776319

GI number: 119776319

Start: 3778866

End: 3780137

Strand: Reverse

Name: zraS [C]

Synonym: Sama_3187

Alternate gene names: 119776319

Gene position: 3780137-3778866 (Counterclockwise)

Preceding gene: 119776320

Following gene: 119776318

Centisome position: 87.78

GC content: 58.65

Gene sequence:

>1272_bases
ATGGCGCGGGGCTCACCTGTGTATTCACCGCTGGCTGCCAATCAGCTCATCACCCTCAGGGCTTTGGGATTGGTGTTGCA
ATTGGTGCTGACCTTTTTTGGTGCCGATGCCTTTGGGCTCTCGCTGCAGCAGAGTGCACTCGTGTATATCTTTGGCCTCG
AACTGCTGTTTCTGGGGCTGACACTCAAGCTAAGGCATGCACTGGTGCTCAGTGCACCCGGGCTTTTTTTGAGCCTTCTT
ATCGATACCCTGCTGTGGATTTCCTGGCTATATTTCAGCGGCGGTGCCACCAACGCCTTTATATCCCTGCTGTTGCTGCC
CATTGCCATTGCCGCCGTCACCCTGCCTTTCTGGGCGCCCTGGACTCTGGCGGCCATCACCACCCTTGCCTATAGCCTGA
TGTTGTATGCGGTGCCTGCCATGGAGGGGGGACACCATGAACATGCAGGCCATATGGCGGGTGGCAGTATGGCCTCTCAT
TACGTGGGTATGTGGTTTAACTTTTTACTCAGTGCGCTTGTACTTACCACCAGCGTGGCCCTGATTGCGAGAAGGCTCAG
GCAAACAGATGCAGAGCTGGCGGCGCTGCGGGAGTCCCAGCTTCGGCAGGAACAGCTGATTGCCCTGGGCACAGCGTCGG
CGCAGATGAGCCATCAGCTCGCCACGCCCCTGGCAAGCCTGAGATTGTTGTTGGACGAAGTGGCCGAGGGCGACACTGAG
CCTGGGCTGGTGGCGGAAATGGATCTTGCCCTGACGCGCTGTGAAACCAGCCTCAATAGCCTCAGAGAAGCTACCGAAGC
CATACGGGAGCGCAAACTGACGGTGGTCAGTGCCGGACAGCTTTTGCACTTACTCAAGCAGCAGGTGTTGCTGCTGATGC
CGGACGTGGTAATGGATATCAGCCTGAGCGACGAGGTGGCAGGGGCACGGCTTTCAACGGATGTGAGCTTGCTGCCCTCG
TTGTTGGCGCTGGTGGACAATGGCGCCAAAGCCTCCAAAAAACATGGCGGCGAGGCTCGGGTATGGCTCAGCGCCCGTTT
GGTGAATGAGGCGTGCATTCGCCTCGATATACGCGATGCCGGTCCTGGTATTGACGCTCAAAAACTCACGGCCCTTGGTG
CCAGACCCGTTTTGAGCGAGCAGGGGCTGGGGATGGCGCTGATGTTGAGCCACGCCAGTCTTGAGCGTCTCGGCGGCGAG
CTGCATTTGGGGAACCTGCCTGAGGGAGGTTGTCTTGCCAGCGTGCGCTTGCCTCTGGAGCAGAGCTCATGA

Upstream 100 bases:

>100_bases
TTAACGTTAAAGTCACTGCGTCAGATTTGTTCTGGCGCAGTGTCAGGGCGGTCCAAACTCGTTAGACTAATGGCGATTCT
TATCTTCGCAAGGATGTTTT

Downstream 100 bases:

>100_bases
GCATGATGCCTAAATTGTTGATTATTGAAGATGATATGGCCTATGGTGCCGTACTCAGTCGCCGCATGAGTCGGCAGGGA
TTTGAATGTCGCCATGTCAG

Product: sensor histidine kinase

Products: NA

Alternate protein names: Sensor Histidine Kinase; Histidine Kinase; Two-Component Sensor; Sensory Transduction Protein Kinase; Sensor Protein; Signal Transduction Histidine Kinase; Two-Component System Sensor Protein; Two-Component Sensor Histidine Kinase; Two-Component Sensor Histidine Protein Kinase; Two-Component System Sensor Kinase; Periplasmic Sensory Histidine Protein Kinase; ATPase Domain-Containing Protein; ATPase-Like Histidine Kinase A; Two-Component Regulatory System Sensor Kinase Protein

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGLTLKLRHALVLSAPGLFLSLL
IDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASH
YVGMWFNFLLSALVLTTSVALIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE
PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLSTDVSLLPS
LLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGE
LHLGNLPEGGCLASVRLPLEQSS

Sequences:

>Translated_423_residues
MARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGLTLKLRHALVLSAPGLFLSLL
IDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASH
YVGMWFNFLLSALVLTTSVALIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE
PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLSTDVSLLPS
LLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGE
LHLGNLPEGGCLASVRLPLEQSS
>Mature_422_residues
ARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGLTLKLRHALVLSAPGLFLSLLI
DTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASHY
VGMWFNFLLSALVLTTSVALIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTEP
GLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLSTDVSLLPSL
LALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGEL
HLGNLPEGGCLASVRLPLEQSS

Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. May Function As A Membrane-Associated Protein Kinase That Phosphorylates Zrar In Response To High Concentrations Of Zinc Or Lead In The Medium. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.- [C]

Molecular weight: Translated: 45198; Mature: 45066

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH
TLKLRHALVLSAPGLFLSLLIDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH
WTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASHYVGMWFNFLLSALVLTTSVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHCCHHHHCC
SLSDEVAGARLSTDVSLLPSLLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDA
CCCCHHCCCHHCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHEEEEECC
GPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGELHLGNLPEGGCLASVRLPLE
CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCC
QSS
CCC
>Mature Secondary Structure 
ARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH
TLKLRHALVLSAPGLFLSLLIDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH
WTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASHYVGMWFNFLLSALVLTTSVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHCCHHHHCC
SLSDEVAGARLSTDVSLLPSLLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDA
CCCCHHCCCHHCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHEEEEECC
GPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGELHLGNLPEGGCLASVRLPLE
CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCC
QSS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA