Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776313

Identifier: 119776313

GI number: 119776313

Start: 3772018

End: 3773139

Strand: Direct

Name: 119776313

Synonym: Sama_3181

Alternate gene names: NA

Gene position: 3772018-3773139 (Clockwise)

Preceding gene: 119776312

Following gene: 119776315

Centisome position: 87.6

GC content: 59.71

Gene sequence:

>1122_bases
ATGCGTCCACGCCCCCCAATCAGGCTCACCGAATTTACCGGTGCTTTTGCCGATTTGGGTACCTTTCTGCCACTGGTTCT
CGGCCTGATTGCACTCAACCAATTTTCGCCCCAGGGCATTTTCCTCGGCTTTGGCCTGTTCGCCTGTGCCACGGCACTGT
TTTATCGCCGTCCCATTCCGGTGCAACCCATGAAGGTAATAGCGGCTCTGGTCATAGCCCAGCAGCTCACACCGGGCATG
ATGCAGGCCAGCGCCATGCTGATGGGCGTTATACTCCTGGTGCTGGCGGCCTCCGGTGCCATCAGCTGGCTGGCACGACA
AATCTCCCAGGCAATCAGCGTCGGTATTCAGCTCGCTATCGGGCTGCAGCTGCTGTGGATGGGACTTACGATGATGACAG
ACGCCCCTGTGCTGGGCTTTGGCGCCTTTGCGCTGATTTTTGTATCACGCTTCTTTCCCCTGAAATACCTCGCCATGCCA
CTGGTGATCCTGCTCGGTATGCTGTGGCAGTATCAAAGCGGCGCCGCAATGAGCCCAAGCTTTAACAACACCCCCTGGCA
TCTGGGCTGGCCCGATGTTTCAGACTGGGGCGCGGCCGCCACCCTGCTGGTGCTACCTCAGCTGGCGCTGACCCTGACCA
ATGCCGTGATTGCCACCTCTGTGATGGCCAAAGACAAGTTCCCCGAGGATGCCGAGCGTTTCAGCCCCAAGGCGCTGGCC
ACCAGCTCAGGGCTGGCCAATCTGCTCTTGAGCCCCTTTGGCGGTGCAGCCATGTGCCACGGCGCCGGTGGTCTTGCGGT
GCAGTATCACTTTGGCGCCAGACAGCTGTGGGCGGGACTTATTTTCGGCATAACCTGCCTGGCTATCGCTTTGGGGTGGA
ATGAGCAGGTGGCCTGGCTGTTGGGACTCATCCCCATGGCTATTCTTGGAAGCCTGCTTTCCACCGCAGGGCTGCAACTG
GCCTGGTCCAAGCGCTTTCTCGATGGCAAACCCTACTGCCTGTTTGTGATAGGCGCCACCGCCATCGTCAGTCTGGGAGT
CAATGCCGCAGCCGGCTTAGCGGTGGGCATGCTGCTGGAATTGGGTCGCCGCCAGTGGCTCAATCAGAGGCAGCTTGACT
GA

Upstream 100 bases:

>100_bases
ATCCATGGAGTTTTTGGGACTCTGGCTACCTATAAAGGTTTATAAAGCTGGCATTACCCTTGCTGTATAAGGGGTAATAT
TCACTCTTCAGGCAACCTGC

Downstream 100 bases:

>100_bases
GTCGCTGATAAAAGCTTATACAGACTCATCGTCCGCCAGCAATGGTAACCACACAGTGACCCGGCAACCGCTGCCGTCCT
GGCGGTTTTGCAGCTGAATA

Product: transporter

Products: NA

Alternate protein names: Sulfate Permease; Xanthine/Uracil/Vitamin C Permease; MFS Superfamily Sulfate Permease; Sulfate Transporter Family Permease; Sulfate Permease SulP; Sulfate Permease-Like Transporter Mfs Superfamily; Sulfate Permease-Like Transporter MFS Superfamily

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRPRPPIRLTEFTGAFADLGTFLPLVLGLIALNQFSPQGIFLGFGLFACATALFYRRPIPVQPMKVIAALVIAQQLTPGM
MQASAMLMGVILLVLAASGAISWLARQISQAISVGIQLAIGLQLLWMGLTMMTDAPVLGFGAFALIFVSRFFPLKYLAMP
LVILLGMLWQYQSGAAMSPSFNNTPWHLGWPDVSDWGAAATLLVLPQLALTLTNAVIATSVMAKDKFPEDAERFSPKALA
TSSGLANLLLSPFGGAAMCHGAGGLAVQYHFGARQLWAGLIFGITCLAIALGWNEQVAWLLGLIPMAILGSLLSTAGLQL
AWSKRFLDGKPYCLFVIGATAIVSLGVNAAAGLAVGMLLELGRRQWLNQRQLD

Sequences:

>Translated_373_residues
MRPRPPIRLTEFTGAFADLGTFLPLVLGLIALNQFSPQGIFLGFGLFACATALFYRRPIPVQPMKVIAALVIAQQLTPGM
MQASAMLMGVILLVLAASGAISWLARQISQAISVGIQLAIGLQLLWMGLTMMTDAPVLGFGAFALIFVSRFFPLKYLAMP
LVILLGMLWQYQSGAAMSPSFNNTPWHLGWPDVSDWGAAATLLVLPQLALTLTNAVIATSVMAKDKFPEDAERFSPKALA
TSSGLANLLLSPFGGAAMCHGAGGLAVQYHFGARQLWAGLIFGITCLAIALGWNEQVAWLLGLIPMAILGSLLSTAGLQL
AWSKRFLDGKPYCLFVIGATAIVSLGVNAAAGLAVGMLLELGRRQWLNQRQLD
>Mature_373_residues
MRPRPPIRLTEFTGAFADLGTFLPLVLGLIALNQFSPQGIFLGFGLFACATALFYRRPIPVQPMKVIAALVIAQQLTPGM
MQASAMLMGVILLVLAASGAISWLARQISQAISVGIQLAIGLQLLWMGLTMMTDAPVLGFGAFALIFVSRFFPLKYLAMP
LVILLGMLWQYQSGAAMSPSFNNTPWHLGWPDVSDWGAAATLLVLPQLALTLTNAVIATSVMAKDKFPEDAERFSPKALA
TSSGLANLLLSPFGGAAMCHGAGGLAVQYHFGARQLWAGLIFGITCLAIALGWNEQVAWLLGLIPMAILGSLLSTAGLQL
AWSKRFLDGKPYCLFVIGATAIVSLGVNAAAGLAVGMLLELGRRQWLNQRQLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39786; Mature: 39786

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRPPIRLTEFTGAFADLGTFLPLVLGLIALNQFSPQGIFLGFGLFACATALFYRRPIP
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
VQPMKVIAALVIAQQLTPGMMQASAMLMGVILLVLAASGAISWLARQISQAISVGIQLAI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLQLLWMGLTMMTDAPVLGFGAFALIFVSRFFPLKYLAMPLVILLGMLWQYQSGAAMSPS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FNNTPWHLGWPDVSDWGAAATLLVLPQLALTLTNAVIATSVMAKDKFPEDAERFSPKALA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHH
TSSGLANLLLSPFGGAAMCHGAGGLAVQYHFGARQLWAGLIFGITCLAIALGWNEQVAWL
HHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGLIPMAILGSLLSTAGLQLAWSKRFLDGKPYCLFVIGATAIVSLGVNAAAGLAVGMLLE
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHH
LGRRQWLNQRQLD
HHHHHHHHHCCCC
>Mature Secondary Structure
MRPRPPIRLTEFTGAFADLGTFLPLVLGLIALNQFSPQGIFLGFGLFACATALFYRRPIP
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
VQPMKVIAALVIAQQLTPGMMQASAMLMGVILLVLAASGAISWLARQISQAISVGIQLAI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLQLLWMGLTMMTDAPVLGFGAFALIFVSRFFPLKYLAMPLVILLGMLWQYQSGAAMSPS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FNNTPWHLGWPDVSDWGAAATLLVLPQLALTLTNAVIATSVMAKDKFPEDAERFSPKALA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHH
TSSGLANLLLSPFGGAAMCHGAGGLAVQYHFGARQLWAGLIFGITCLAIALGWNEQVAWL
HHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGLIPMAILGSLLSTAGLQLAWSKRFLDGKPYCLFVIGATAIVSLGVNAAAGLAVGMLLE
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHH
LGRRQWLNQRQLD
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA