| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheB2 [H]
Identifier: 119776268
GI number: 119776268
Start: 3724392
End: 3725399
Strand: Direct
Name: cheB2 [H]
Synonym: Sama_3136
Alternate gene names: 119776268
Gene position: 3724392-3725399 (Clockwise)
Preceding gene: 119776265
Following gene: 119776269
Centisome position: 86.49
GC content: 54.46
Gene sequence:
>1008_bases ATGGCACTTCCAGTATTGATATGTGACGACTCCGCCATGGCTCGAAAGCAGATGGCGCGCACCCTGCCAAAGGATTGGGA TGTGGACATTACCTTTGCCACCAATGGTGCAGAAGGCCTGGAGGCCATCCGGGCCGGCAAGGGCGAGGTGGTGTTTCTTG ACCTCAATATGCCGGTGATGGATGGCTATGAGGTATTGCAAACCATTCAGCAACAGGACTTACCCGCACTGGTCATAGTG GTGTCGGGTGACATTCAAATTAAAGCGCACGAACGGGTTAAAGCCTTGGGTGCACTCGATTTTATCCAAAAGCCCGTCAG CGCCGAGGCCATAGCCGGCATCCTCCAGGAATACGGTATTCTGGTGCCCGGCGAGGGCGAGGGCGACGAAGCCGAAGACA ACCCCCTGTTAAAAGTCGACATGCGCGATGCCTGCCAGGAAATCGCCAACGTCGCCATGGGCCGGGCGGCAGATCTACTG GCCAAGCTGCTTGATGTGTTTGTGGTTTTGCCCATTCCCAACGTCAATGTGCTGGAAGTGAGCGAGCTAACCATGGCGCT TAAGGCCACAGAAACTTCTGCCAAGGTTACCGCACTGTGCCAAGGCTTTATCGGTGCAGGGGTGGCTGGAGAGGCGCTGC TGCTATTCCATGATTCCAGTTTTCAGGACATGGCCAAGCTGATGAAACTCGATGGTCCCGGCGATGAGGCCACCGAAGTG GAAGTGTTGATAGACACAGGCAATGTGCTTATCGGCGCCTTTTTGAATGGCATCGCCGAGCAACTGGACATGCATTTCAG TCAGGCACATCCGGTGGTGCTGGGCCGTCATTGCACGGTCAACGACTTAATCCACGACAATGCCGAGAAATGGCACCGCA CCCTGGCGATGGAAATCAACTACCGTATCGAAGATCACAACATTGAGTGCGATCTTCTGCTTCTTTTTACCGAAGACTCG CTGCCGACCCTGAACTACAAGCTCGGCTATATGTTGGATACCGATTGA
Upstream 100 bases:
>100_bases ATGGGATCCAGCCAGGAAAGGCGCCACGACCCAAAGCAGGATGACAGCAGAAATTGGTGTTATCTTGAATAAGAAGAACA ATCGAGGACCTTATTCCAGC
Downstream 100 bases:
>100_bases GGCCAAATCCCTGATGTCCAATGACGCAGACCTGATGAACGAACTCCACTGGCTTATCGATATGGTGCAAACCATAGAGG TGGGTCTGGTGGTGCTGGAC
Product: CheC, inhibitor of MCP methylation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MALPVLICDDSAMARKQMARTLPKDWDVDITFATNGAEGLEAIRAGKGEVVFLDLNMPVMDGYEVLQTIQQQDLPALVIV VSGDIQIKAHERVKALGALDFIQKPVSAEAIAGILQEYGILVPGEGEGDEAEDNPLLKVDMRDACQEIANVAMGRAADLL AKLLDVFVVLPIPNVNVLEVSELTMALKATETSAKVTALCQGFIGAGVAGEALLLFHDSSFQDMAKLMKLDGPGDEATEV EVLIDTGNVLIGAFLNGIAEQLDMHFSQAHPVVLGRHCTVNDLIHDNAEKWHRTLAMEINYRIEDHNIECDLLLLFTEDS LPTLNYKLGYMLDTD
Sequences:
>Translated_335_residues MALPVLICDDSAMARKQMARTLPKDWDVDITFATNGAEGLEAIRAGKGEVVFLDLNMPVMDGYEVLQTIQQQDLPALVIV VSGDIQIKAHERVKALGALDFIQKPVSAEAIAGILQEYGILVPGEGEGDEAEDNPLLKVDMRDACQEIANVAMGRAADLL AKLLDVFVVLPIPNVNVLEVSELTMALKATETSAKVTALCQGFIGAGVAGEALLLFHDSSFQDMAKLMKLDGPGDEATEV EVLIDTGNVLIGAFLNGIAEQLDMHFSQAHPVVLGRHCTVNDLIHDNAEKWHRTLAMEINYRIEDHNIECDLLLLFTEDS LPTLNYKLGYMLDTD >Mature_334_residues ALPVLICDDSAMARKQMARTLPKDWDVDITFATNGAEGLEAIRAGKGEVVFLDLNMPVMDGYEVLQTIQQQDLPALVIVV SGDIQIKAHERVKALGALDFIQKPVSAEAIAGILQEYGILVPGEGEGDEAEDNPLLKVDMRDACQEIANVAMGRAADLLA KLLDVFVVLPIPNVNVLEVSELTMALKATETSAKVTALCQGFIGAGVAGEALLLFHDSSFQDMAKLMKLDGPGDEATEVE VLIDTGNVLIGAFLNGIAEQLDMHFSQAHPVVLGRHCTVNDLIHDNAEKWHRTLAMEINYRIEDHNIECDLLLLFTEDSL PTLNYKLGYMLDTD
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 36436; Mature: 36305
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPVLICDDSAMARKQMARTLPKDWDVDITFATNGAEGLEAIRAGKGEVVFLDLNMPVM CCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCC DGYEVLQTIQQQDLPALVIVVSGDIQIKAHERVKALGALDFIQKPVSAEAIAGILQEYGI CCHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE LVPGEGEGDEAEDNPLLKVDMRDACQEIANVAMGRAADLLAKLLDVFVVLPIPNVNVLEV EECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHEEEECCCCCCEEEH SELTMALKATETSAKVTALCQGFIGAGVAGEALLLFHDSSFQDMAKLMKLDGPGDEATEV HHHHEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEE EVLIDTGNVLIGAFLNGIAEQLDMHFSQAHPVVLGRHCTVNDLIHDNAEKWHRTLAMEIN EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHEEEEEEE YRIEDHNIECDLLLLFTEDSLPTLNYKLGYMLDTD EEEECCCCCEEEEEEEECCCCCEEEEEEEEEEECC >Mature Secondary Structure ALPVLICDDSAMARKQMARTLPKDWDVDITFATNGAEGLEAIRAGKGEVVFLDLNMPVM CCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCC DGYEVLQTIQQQDLPALVIVVSGDIQIKAHERVKALGALDFIQKPVSAEAIAGILQEYGI CCHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE LVPGEGEGDEAEDNPLLKVDMRDACQEIANVAMGRAADLLAKLLDVFVVLPIPNVNVLEV EECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHEEEECCCCCCEEEH SELTMALKATETSAKVTALCQGFIGAGVAGEALLLFHDSSFQDMAKLMKLDGPGDEATEV HHHHEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEE EVLIDTGNVLIGAFLNGIAEQLDMHFSQAHPVVLGRHCTVNDLIHDNAEKWHRTLAMEIN EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHEEEEEEE YRIEDHNIECDLLLLFTEDSLPTLNYKLGYMLDTD EEEECCCCCEEEEEEEECCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA