Click here to switch to the map view.

The map label for this gene is 119776252

Identifier: 119776252

GI number: 119776252

Start: 3700055

End: 3700594

Strand: Direct

Name: 119776252

Synonym: Sama_3120

Alternate gene names: NA

Gene position: 3700055-3700594 (Clockwise)

Preceding gene: 119776251

Following gene: 119776253

Centisome position: 85.93

GC content: 43.89

Gene sequence:

>540_bases
ATGTCAGAATCCATAAAAACCTTTGAACGAGCGTTAAGCGATGCAGAGGCACTGCTCAAATGCTATGACGACTTAAATGA
GGTCAAAGACAAATCCTCACCGCCACCGGAAGCCTTAAAGAGAGCATCACTGATCATGATACTCACCGCTTGGGAAACCT
ATGTGGAAGACATTGCTATGGAGCTGTTCGACAAAAAGTTTAGCTCTATCAGAGGTTGTCAGATTGGCACTTTCATGGAA
CAGCAGTTTTCCAATAAACTCAAATCCTTCCACAATCCCGACTCGCAAAAAACCAAGCAACTGTTCTCGGAATTTTTCGG
CGCAGACGTCGCATCTTGTTGGGTGTTCAATAACTATCCCACCTCTAAAGAAGTGAGCACTCAACTCAATCTATGGATCA
GTAAACGTGGCGATGCTGTACATAGAGCACACACAGATAAGCAAGCAACACACATAGTCAAACGCACAGACCTTGATAAG
TGCCTGTTCTTCTTCAGAACGCTGGTTAAAGCAACTGACAACTATCTGGCTAAGATATAG

Upstream 100 bases:

>100_bases
AAAGAAACCAAGCAGAACGCTCCCCCTAAGCGTACCGATGCTGTAAGCCACACCCCTACAACCATAAGTAATGAATAATA
AACTCCCTGAGAGATAGACC

Downstream 100 bases:

>100_bases
ACATCTTGGGTATTCAGCCCAGCCGCCAAAGTGGTATCGATAGGACTGCAAGGAAGTGAAATCTTTGGGCGCGGGTTTAA
GAAAAGGTGTGGGTGTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSESIKTFERALSDAEALLKCYDDLNEVKDKSSPPPEALKRASLIMILTAWETYVEDIAMELFDKKFSSIRGCQIGTFME
QQFSNKLKSFHNPDSQKTKQLFSEFFGADVASCWVFNNYPTSKEVSTQLNLWISKRGDAVHRAHTDKQATHIVKRTDLDK
CLFFFRTLVKATDNYLAKI

Sequences:

>Translated_179_residues
MSESIKTFERALSDAEALLKCYDDLNEVKDKSSPPPEALKRASLIMILTAWETYVEDIAMELFDKKFSSIRGCQIGTFME
QQFSNKLKSFHNPDSQKTKQLFSEFFGADVASCWVFNNYPTSKEVSTQLNLWISKRGDAVHRAHTDKQATHIVKRTDLDK
CLFFFRTLVKATDNYLAKI
>Mature_178_residues
SESIKTFERALSDAEALLKCYDDLNEVKDKSSPPPEALKRASLIMILTAWETYVEDIAMELFDKKFSSIRGCQIGTFMEQ
QFSNKLKSFHNPDSQKTKQLFSEFFGADVASCWVFNNYPTSKEVSTQLNLWISKRGDAVHRAHTDKQATHIVKRTDLDKC
LFFFRTLVKATDNYLAKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20579; Mature: 20447

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESIKTFERALSDAEALLKCYDDLNEVKDKSSPPPEALKRASLIMILTAWETYVEDIAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELFDKKFSSIRGCQIGTFMEQQFSNKLKSFHNPDSQKTKQLFSEFFGADVASCWVFNNYP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHEECCCC
TSKEVSTQLNLWISKRGDAVHRAHTDKQATHIVKRTDLDKCLFFFRTLVKATDNYLAKI
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SESIKTFERALSDAEALLKCYDDLNEVKDKSSPPPEALKRASLIMILTAWETYVEDIAM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELFDKKFSSIRGCQIGTFMEQQFSNKLKSFHNPDSQKTKQLFSEFFGADVASCWVFNNYP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHEECCCC
TSKEVSTQLNLWISKRGDAVHRAHTDKQATHIVKRTDLDKCLFFFRTLVKATDNYLAKI
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA