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The map label for this gene is glbN [H]

Identifier: 119776249

GI number: 119776249

Start: 3696237

End: 3696713

Strand: Direct

Name: glbN [H]

Synonym: Sama_3117

Alternate gene names: 119776249

Gene position: 3696237-3696713 (Clockwise)

Preceding gene: 119776248

Following gene: 119776251

Centisome position: 85.84

GC content: 54.51

Gene sequence:

>477_bases
ATGAGCCATGTATTACGCAAGTTTCTCCCATTAACCACAGCCCTTTCACTCACGACCGTTTTGCTTGCTGGCTGCACCCT
GCCTGATGCCAACACCACAACACCCGGTGAAAACGCCAGCCCTCCAACCCTTTATCAGGCCCTCGGGGGCGAGACCGGCG
TAGCGGCTGTCGTCGATGGCTTACTTGCACGTATCGCACGGGATCCCCGCATTGTGCAGCACTTCGAAGAAACGGATATT
GCGATATTTCGCGAGCGCCTTATCGAACATCTGTGCGCGGTCACAGATGGCGGCTGCGTCTATCAAGGCGAAAGCATGGC
AGACAGCCACAAGGGTTTGAATATCACTCAGGCCGACTTTGATGCCCTGGTGGGGCATTTGATTGAATCCCTGAAGGCAC
AGCAAATTCCAACATCAACCCGTAATGCGCTGCTGAAGCGCCTTGCGCCCATGTATTCCGACGTAACCTATCAGTAA

Upstream 100 bases:

>100_bases
TCAATAAACATCTGTCGGTGGTCACCGCCTATGCTGATTTAGGCAGCATCGCGGGTTTTGATAATCAGCAAGGCTGGTAT
CTGTCGCTGGAGGGCGCGCT

Downstream 100 bases:

>100_bases
CGGCTATCCATGTTGTCACTGCAACTGATAACTCTGCGGTGGCTCTGCAGCTAAATGTGAGGGGCGGGCTGCCGTTAGCG
CAGCCATTTCTAGAGAAGCA

Product: globin

Products: NA

Alternate protein names: Truncated Hb; Cyanoglobin [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSHVLRKFLPLTTALSLTTVLLAGCTLPDANTTTPGENASPPTLYQALGGETGVAAVVDGLLARIARDPRIVQHFEETDI
AIFRERLIEHLCAVTDGGCVYQGESMADSHKGLNITQADFDALVGHLIESLKAQQIPTSTRNALLKRLAPMYSDVTYQ

Sequences:

>Translated_158_residues
MSHVLRKFLPLTTALSLTTVLLAGCTLPDANTTTPGENASPPTLYQALGGETGVAAVVDGLLARIARDPRIVQHFEETDI
AIFRERLIEHLCAVTDGGCVYQGESMADSHKGLNITQADFDALVGHLIESLKAQQIPTSTRNALLKRLAPMYSDVTYQ
>Mature_157_residues
SHVLRKFLPLTTALSLTTVLLAGCTLPDANTTTPGENASPPTLYQALGGETGVAAVVDGLLARIARDPRIVQHFEETDIA
IFRERLIEHLCAVTDGGCVYQGESMADSHKGLNITQADFDALVGHLIESLKAQQIPTSTRNALLKRLAPMYSDVTYQ

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group I subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486
- InterPro:   IPR016339 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 17033; Mature: 16901

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVLRKFLPLTTALSLTTVLLAGCTLPDANTTTPGENASPPTLYQALGGETGVAAVVDG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH
LLARIARDPRIVQHFEETDIAIFRERLIEHLCAVTDGGCVYQGESMADSHKGLNITQADF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCHHHH
DALVGHLIESLKAQQIPTSTRNALLKRLAPMYSDVTYQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SHVLRKFLPLTTALSLTTVLLAGCTLPDANTTTPGENASPPTLYQALGGETGVAAVVDG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH
LLARIARDPRIVQHFEETDIAIFRERLIEHLCAVTDGGCVYQGESMADSHKGLNITQADF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCHHHH
DALVGHLIESLKAQQIPTSTRNALLKRLAPMYSDVTYQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1609281; 8063099 [H]