Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776238

Identifier: 119776238

GI number: 119776238

Start: 3678869

End: 3679156

Strand: Direct

Name: 119776238

Synonym: Sama_3106

Alternate gene names: NA

Gene position: 3678869-3679156 (Clockwise)

Preceding gene: 119776237

Following gene: 119776242

Centisome position: 85.43

GC content: 48.96

Gene sequence:

>288_bases
ATGAAAACCGAATTGGAAGCCGAGCTGAAAGCCACCCAAAAATCCATGGCAAAGCTGCAGCTAATTGGTGCTATTGGCAA
TATCATGCTGGGGCTTGGCCTCTACGGAATCTTTACCGGGGAGGCCGCGTTTCACGCATTTTTAAGTGACCCCTTACACT
GCTATGTCCTGCTAAGCATTGGCGGCATGATTGCCCTCTGGGAAGGGCTGAAGATGATTCAACTGGCAAAACGCAGGCAA
TCACTTAAGACGCAGATAAGGCAAATAACTGACCAGACCAAGGCTTAA

Upstream 100 bases:

>100_bases
ACAGGATTGAGTGGCGGTGTCACCGGCAGCAGCTGTAGCGGCGTTGCCATAGGCGAGTACATCAGGACAGGTAAAACAGA
CAGAGCAGATAAGAAGGCAG

Downstream 100 bases:

>100_bases
GCAAGGATCAGTGCTCAGACGTATCCGATGACAGCTCCTGCAGGATAAAGCCTTGTGCAGCAGGCACAAGATGATAGAGC
ACATCAAATCTGTCTTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKTELEAELKATQKSMAKLQLIGAIGNIMLGLGLYGIFTGEAAFHAFLSDPLHCYVLLSIGGMIALWEGLKMIQLAKRRQ
SLKTQIRQITDQTKA

Sequences:

>Translated_95_residues
MKTELEAELKATQKSMAKLQLIGAIGNIMLGLGLYGIFTGEAAFHAFLSDPLHCYVLLSIGGMIALWEGLKMIQLAKRRQ
SLKTQIRQITDQTKA
>Mature_95_residues
MKTELEAELKATQKSMAKLQLIGAIGNIMLGLGLYGIFTGEAAFHAFLSDPLHCYVLLSIGGMIALWEGLKMIQLAKRRQ
SLKTQIRQITDQTKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10478; Mature: 10478

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTELEAELKATQKSMAKLQLIGAIGNIMLGLGLYGIFTGEAAFHAFLSDPLHCYVLLSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GGMIALWEGLKMIQLAKRRQSLKTQIRQITDQTKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTELEAELKATQKSMAKLQLIGAIGNIMLGLGLYGIFTGEAAFHAFLSDPLHCYVLLSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GGMIALWEGLKMIQLAKRRQSLKTQIRQITDQTKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA