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The map label for this gene is degQ [H]

Identifier: 119776205

GI number: 119776205

Start: 3651391

End: 3652740

Strand: Direct

Name: degQ [H]

Synonym: Sama_3073

Alternate gene names: 119776205

Gene position: 3651391-3652740 (Clockwise)

Preceding gene: 119776197

Following gene: 119776206

Centisome position: 84.79

GC content: 55.41

Gene sequence:

>1350_bases
ATGAAAGCAAAACTCTCCCTCGTATCCGCCGCTATTTTAGGTGCAACCCTGACCCTTGGCACCCTGCCCGCTTATGCCTC
TTTGCCGGTAGCCGTTGACGGACAGCAGCTGCCAAGCCTTGCGCCCATGTTGGAAAAAACCACTCCGGCTGTGGTCTCGG
TTGCTGTGTCGGGTACCCATGTCTCCAAGCAGCGGGTCCCCGATGTATTCCGCTATTTTTTTGGTCCCAACGCGCCTCAG
GAGCAGGTTCGTGAACGCCCCTTTCGCGGACTGGGCTCGGGCGTCATTATCGATGCAGACAAGGGCTATATAGTCACCAA
CAACCACGTTATTGATGGCGCAGACACCATACAGATTGGTTTGCTCGATGGGCGCGAATTTGAAGCCAAGCTCATCGGCA
GCGACAGTGAATCCGATATTGCGTTGCTGCAAATCAAGGCGGATAAACTGACCGAGATTAAGTCGGCCGACTCAGATGCC
ATCCACGTGGGCGACTTCGCCGTAGCCATAGGCAACCCCTTTGGTCTGGGCCAAACAGTGACCTCAGGCATAGTCTCTGC
CTTGGGCCGCAGTGGTCTGGGTATCGAGATGCTGGAAAACTTTATCCAAACCGACGCGGCTATCAATAGCGGTAACTCAG
GCGGCGCACTGGTGAATCTTCGTGGCGAGCTGATTGGTATCAATACCGCCATCGTTGCTCCCGGCGGCGGCAACGTGGGT
ATAGGTTTTGCCATTCCCGCCAACATGATGCATTCACTGGTGGATCAGATTATCGAACATGGTGAAGTGCGCCGCGGTGT
ACTCGGCATCTCCGGACGTGAGCTCGACAGTAAACTGGCCGAAGGCTTTGGTCTGGACTCCCAGCACGGTGCCTTTGTGA
ATGAAGTCATGCCAGACAGCGCAGCCGACGACGCTGGCATCAAAGCCGGTGACATCATCATCAGCGTTGATGGCCGTAAG
ATTAAGAGCTTCCAGGAACTGCGCGCCAAAATAGGCACTCTGGGCGCCGGTGCCAAGGTGGAACTGGGCATCATCCGCGA
CGGCAAAAACAAGACAGTGAAGGTCACGTTGGGCGAAGCGTCCAATCAAACAGCCTCCGCTGATGAGTTGCACCCTCAGC
TGGCCGGTGCAAATCTCGAAAGCACCTCCAAAGGGGTTGAAATCATGGAAGTACAGGAAGGCTCCCCTGCCGCTCTGAGC
GGTCTGCGCAAGGGTGATATCATAGTGGGTGTCAATCGCACTGCCGTGAAAGACCTGAAAGAGCTCAGAGAGCAACTGAA
AGAACAGGATGGCGCTGCCGCCCTGAAAGTACTGCGAGGAAAGAGCATCCGTTATCTCGTACTGAGATAA

Upstream 100 bases:

>100_bases
AATCGTGACGAACTTTGTTGTTACACCCGGGTCGGAAGGGTTATACAAGTGCCAAGCCTGTCACTTTGAAACCGATCCCC
GAATTGGAGCAATGACTAAG

Downstream 100 bases:

>100_bases
GCTGCTACCCCGGTCATAAGCCCAGCCTCCCGCTGGGCTTATTGTTTTGAAACGTGATAATCTAGTTCAACTTTTTTACA
ATTCGAATCACCCCAATGAA

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKAKLSLVSAAILGATLTLGTLPAYASLPVAVDGQQLPSLAPMLEKTTPAVVSVAVSGTHVSKQRVPDVFRYFFGPNAPQ
EQVRERPFRGLGSGVIIDADKGYIVTNNHVIDGADTIQIGLLDGREFEAKLIGSDSESDIALLQIKADKLTEIKSADSDA
IHVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLRGELIGINTAIVAPGGGNVG
IGFAIPANMMHSLVDQIIEHGEVRRGVLGISGRELDSKLAEGFGLDSQHGAFVNEVMPDSAADDAGIKAGDIIISVDGRK
IKSFQELRAKIGTLGAGAKVELGIIRDGKNKTVKVTLGEASNQTASADELHPQLAGANLESTSKGVEIMEVQEGSPAALS
GLRKGDIIVGVNRTAVKDLKELREQLKEQDGAAALKVLRGKSIRYLVLR

Sequences:

>Translated_449_residues
MKAKLSLVSAAILGATLTLGTLPAYASLPVAVDGQQLPSLAPMLEKTTPAVVSVAVSGTHVSKQRVPDVFRYFFGPNAPQ
EQVRERPFRGLGSGVIIDADKGYIVTNNHVIDGADTIQIGLLDGREFEAKLIGSDSESDIALLQIKADKLTEIKSADSDA
IHVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLRGELIGINTAIVAPGGGNVG
IGFAIPANMMHSLVDQIIEHGEVRRGVLGISGRELDSKLAEGFGLDSQHGAFVNEVMPDSAADDAGIKAGDIIISVDGRK
IKSFQELRAKIGTLGAGAKVELGIIRDGKNKTVKVTLGEASNQTASADELHPQLAGANLESTSKGVEIMEVQEGSPAALS
GLRKGDIIVGVNRTAVKDLKELREQLKEQDGAAALKVLRGKSIRYLVLR
>Mature_449_residues
MKAKLSLVSAAILGATLTLGTLPAYASLPVAVDGQQLPSLAPMLEKTTPAVVSVAVSGTHVSKQRVPDVFRYFFGPNAPQ
EQVRERPFRGLGSGVIIDADKGYIVTNNHVIDGADTIQIGLLDGREFEAKLIGSDSESDIALLQIKADKLTEIKSADSDA
IHVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLRGELIGINTAIVAPGGGNVG
IGFAIPANMMHSLVDQIIEHGEVRRGVLGISGRELDSKLAEGFGLDSQHGAFVNEVMPDSAADDAGIKAGDIIISVDGRK
IKSFQELRAKIGTLGAGAKVELGIIRDGKNKTVKVTLGEASNQTASADELHPQLAGANLESTSKGVEIMEVQEGSPAALS
GLRKGDIIVGVNRTAVKDLKELREQLKEQDGAAALKVLRGKSIRYLVLR

Specific function: Protease with a shared specificity with degP [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=305, Percent_Identity=36.3934426229508, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI22129776, Length=315, Percent_Identity=33.968253968254, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI7019477, Length=337, Percent_Identity=33.2344213649852, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI24308541, Length=299, Percent_Identity=30.7692307692308, Blast_Score=129, Evalue=6e-30,
Organism=Escherichia coli, GI1789629, Length=457, Percent_Identity=56.8927789934354, Blast_Score=475, Evalue=1e-135,
Organism=Escherichia coli, GI1786356, Length=443, Percent_Identity=53.9503386004515, Blast_Score=457, Evalue=1e-130,
Organism=Escherichia coli, GI1789630, Length=355, Percent_Identity=43.6619718309859, Blast_Score=230, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24646839, Length=253, Percent_Identity=35.1778656126482, Blast_Score=125, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.-

Molecular weight: Translated: 46773; Mature: 46773

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKLSLVSAAILGATLTLGTLPAYASLPVAVDGQQLPSLAPMLEKTTPAVVSVAVSGTH
CCCHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCHHHHHHCCCCEEEEEEECCCC
VSKQRVPDVFRYFFGPNAPQEQVRERPFRGLGSGVIIDADKGYIVTNNHVIDGADTIQIG
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEECCEEECCCCEEEEE
LLDGREFEAKLIGSDSESDIALLQIKADKLTEIKSADSDAIHVGDFAVAIGNPFGLGQTV
EECCCCEEEEEECCCCCCCEEEEEEECHHHHHHHCCCCCEEEECCEEEEECCCCCCCHHH
TSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLRGELIGINTAIVAPGGGNVG
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEEEEECCCCCEE
IGFAIPANMMHSLVDQIIEHGEVRRGVLGISGRELDSKLAEGFGLDSQHGAFVNEVMPDS
EEEECCHHHHHHHHHHHHHCCCHHCCEECCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCC
AADDAGIKAGDIIISVDGRKIKSFQELRAKIGTLGAGAKVELGIIRDGKNKTVKVTLGEA
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEECCC
SNQTASADELHPQLAGANLESTSKGVEIMEVQEGSPAALSGLRKGDIIVGVNRTAVKDLK
CCCCCCHHHHCHHHCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEEEECCHHHHHHHH
ELREQLKEQDGAAALKVLRGKSIRYLVLR
HHHHHHHHCCCHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MKAKLSLVSAAILGATLTLGTLPAYASLPVAVDGQQLPSLAPMLEKTTPAVVSVAVSGTH
CCCHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCCHHHHHHCCCCEEEEEEECCCC
VSKQRVPDVFRYFFGPNAPQEQVRERPFRGLGSGVIIDADKGYIVTNNHVIDGADTIQIG
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEECCEEECCCCEEEEE
LLDGREFEAKLIGSDSESDIALLQIKADKLTEIKSADSDAIHVGDFAVAIGNPFGLGQTV
EECCCCEEEEEECCCCCCCEEEEEEECHHHHHHHCCCCCEEEECCEEEEECCCCCCCHHH
TSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLRGELIGINTAIVAPGGGNVG
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEEEEECCCCCEE
IGFAIPANMMHSLVDQIIEHGEVRRGVLGISGRELDSKLAEGFGLDSQHGAFVNEVMPDS
EEEECCHHHHHHHHHHHHHCCCHHCCEECCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCC
AADDAGIKAGDIIISVDGRKIKSFQELRAKIGTLGAGAKVELGIIRDGKNKTVKVTLGEA
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEECCC
SNQTASADELHPQLAGANLESTSKGVEIMEVQEGSPAALSGLRKGDIIVGVNRTAVKDLK
CCCCCCHHHHCHHHCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEEEECCHHHHHHHH
ELREQLKEQDGAAALKVLRGKSIRYLVLR
HHHHHHHHCCCHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8576051; 9278503 [H]