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The map label for this gene is petC [H]

Identifier: 119776151

GI number: 119776151

Start: 3593427

End: 3594125

Strand: Reverse

Name: petC [H]

Synonym: Sama_3019

Alternate gene names: 119776151

Gene position: 3594125-3593427 (Counterclockwise)

Preceding gene: 119776152

Following gene: 119776150

Centisome position: 83.47

GC content: 52.65

Gene sequence:

>699_bases
ATGAAAAAGTTACTCATTGCTTTGGTTGCTCTGGTGCCCACTCTTGGCTTCGCCGCTGGCGGCCACAACGTGCACCTGGA
AAAGGCCAATATCGATCTGAACGATAAAGAGTCTCTGGTTCGTGGTCTGGACTTGTTCCAGCACTACTGCTCAGGCTGTC
ACAGCACTCAGTATCAGCGCTATGAGCGTGTTGCCAACGACCTGGGCGTCTCTATTGATGAGATGCGTACCAAGTTCGTG
TTCACCGGTGCCAAAGTCGGTGAACTGATGGAAAACGCCATTCCTGAGAAAGACGCTGCCAAATGGTTCGGTGCTGCGCC
ACCGGATCTGACGTTGGCCGCCCGTGTGCGTGGCGAAGACTGGGTTTACTCTTACCTCAAGGGTTTCTATAAAGACCCAA
GCCGTCCTTTCGGCGTGAACAACACTGTATTCCCTTCTGTGGGTATGCCGCATGTGTTGGAAGGTTTGCAGGGTATCGCG
GTTAAGCAGGCAGACGGCAGTCTGGTTGCCACCGGCGGTAAGTTGAGTGCTGAAGAGTACGATCAGGCTGCCCGTGACAT
CACAGGTTTCCTGGTGTACTCAGCAGAACCTATCAAACTGGAGCGTCAGGCTCTGGGTATTTGGGTGCTCGGCTTCCTGT
TTATCTTCTTTGTTGTGGCCTACTTCCTGAAGAAAGAATACTGGAAGGATGTACACTGA

Upstream 100 bases:

>100_bases
CTCAAGTGTTCACCATCACCTATTTTGGCTTCTTCGTAGCCCTGTGGGTGTACAGCAAGAATGAGAAGACCAAGCCAGTT
CCAGCGAGGTTGACTAAATA

Downstream 100 bases:

>100_bases
TAGCCAATAGCGGGTAAAATACTCTATCCGCGTATTGAAACGGGGGGCGTCAGCCCCTCGTTTATTTTATTTGTTTCGAT
TCTGGAGGGTATCAATGGCT

Product: ubiquinol-cytochrome c reductase cytochrome c1 subunit

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKLLIALVALVPTLGFAAGGHNVHLEKANIDLNDKESLVRGLDLFQHYCSGCHSTQYQRYERVANDLGVSIDEMRTKFV
FTGAKVGELMENAIPEKDAAKWFGAAPPDLTLAARVRGEDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEGLQGIA
VKQADGSLVATGGKLSAEEYDQAARDITGFLVYSAEPIKLERQALGIWVLGFLFIFFVVAYFLKKEYWKDVH

Sequences:

>Translated_232_residues
MKKLLIALVALVPTLGFAAGGHNVHLEKANIDLNDKESLVRGLDLFQHYCSGCHSTQYQRYERVANDLGVSIDEMRTKFV
FTGAKVGELMENAIPEKDAAKWFGAAPPDLTLAARVRGEDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEGLQGIA
VKQADGSLVATGGKLSAEEYDQAARDITGFLVYSAEPIKLERQALGIWVLGFLFIFFVVAYFLKKEYWKDVH
>Mature_232_residues
MKKLLIALVALVPTLGFAAGGHNVHLEKANIDLNDKESLVRGLDLFQHYCSGCHSTQYQRYERVANDLGVSIDEMRTKFV
FTGAKVGELMENAIPEKDAAKWFGAAPPDLTLAARVRGEDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEGLQGIA
VKQADGSLVATGGKLSAEEYDQAARDITGFLVYSAEPIKLERQALGIWVLGFLFIFFVVAYFLKKEYWKDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324639, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24658292, Length=271, Percent_Identity=27.3062730627306, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI21358225, Length=266, Percent_Identity=27.0676691729323, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 25781; Mature: 25781

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLIALVALVPTLGFAAGGHNVHLEKANIDLNDKESLVRGLDLFQHYCSGCHSTQYQR
CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
YERVANDLGVSIDEMRTKFVFTGAKVGELMENAIPEKDAAKWFGAAPPDLTLAARVRGED
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCHH
WVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEGLQGIAVKQADGSLVATGGKLSAEEY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCEEEECCCCCHHHH
DQAARDITGFLVYSAEPIKLERQALGIWVLGFLFIFFVVAYFLKKEYWKDVH
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLLIALVALVPTLGFAAGGHNVHLEKANIDLNDKESLVRGLDLFQHYCSGCHSTQYQR
CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
YERVANDLGVSIDEMRTKFVFTGAKVGELMENAIPEKDAAKWFGAAPPDLTLAARVRGED
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCHH
WVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEGLQGIAVKQADGSLVATGGKLSAEEY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCEEEECCCCCHHHH
DQAARDITGFLVYSAEPIKLERQALGIWVLGFLFIFFVVAYFLKKEYWKDVH
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA