Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is csgA [C]

Identifier: 119776078

GI number: 119776078

Start: 3502428

End: 3502862

Strand: Direct

Name: csgA [C]

Synonym: Sama_2946

Alternate gene names: 119776078

Gene position: 3502428-3502862 (Clockwise)

Preceding gene: 119776072

Following gene: 119776079

Centisome position: 81.34

GC content: 52.87

Gene sequence:

>435_bases
GTGTCTTACTGCAAATCGCTGGTTTTAAGCGCTTCCCTCCTGCTTTGCTGCCCCGCCGTGTTGGCTGACACGCCAACATC
TGGGGTAGGCGACGAGATGTCGCTTTCCGTCCCCCTGCAAACTCTGCTGGAGTCCAGCGGACGGGACAACCTCATCGATT
TGTTTCAGATAGGGGTGCAAAACGAGGCCATGGTTGCCCAGTCGGGCGATTCCAACAGCCTTATTGTCACCCAAATCGGC
GTCGCAAATCAGGCTCTGGTGCGTCAGCTGGGCACAGACAATGAGGTGGATTTGTTTCAGGCAGGAAACCACAACAGCGC
TGAGATAACCCAGATAGGAGACAACAATCTGGTGCAGCTCAAGCAGTTGGGCAGTGCGAATTTTTCTATTCAACAAATTG
GCGATGGAGCATCTATCGCCGTGACTCAATATTAA

Upstream 100 bases:

>100_bases
TTTCTTCCGATTGTGACTTAGGTCTCAGAACCTTAACTTGGTGCTGTATTTTTGCCGAGCCGTCGGCTTTGGAAGTTTAC
GCATCGCAAAGGAGTGTCGG

Downstream 100 bases:

>100_bases
CAGGGAGCGTCACATGAAATCACAAGCGAAGAAGTCACTCTTGGCTTTAGCCATCACCGCGGGTATCGGCATGTCAGCGC
AGGCCTTTGCCAGCGATATC

Product: minor curlin subunit CsgB

Products: NA

Alternate protein names: Minor Curlin Subunit CsgB

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSYCKSLVLSASLLLCCPAVLADTPTSGVGDEMSLSVPLQTLLESSGRDNLIDLFQIGVQNEAMVAQSGDSNSLIVTQIG
VANQALVRQLGTDNEVDLFQAGNHNSAEITQIGDNNLVQLKQLGSANFSIQQIGDGASIAVTQY

Sequences:

>Translated_144_residues
MSYCKSLVLSASLLLCCPAVLADTPTSGVGDEMSLSVPLQTLLESSGRDNLIDLFQIGVQNEAMVAQSGDSNSLIVTQIG
VANQALVRQLGTDNEVDLFQAGNHNSAEITQIGDNNLVQLKQLGSANFSIQQIGDGASIAVTQY
>Mature_143_residues
SYCKSLVLSASLLLCCPAVLADTPTSGVGDEMSLSVPLQTLLESSGRDNLIDLFQIGVQNEAMVAQSGDSNSLIVTQIGV
ANQALVRQLGTDNEVDLFQAGNHNSAEITQIGDNNLVQLKQLGSANFSIQQIGDGASIAVTQY

Specific function: Curlin Is The Structural Subunit Of The Curli. Curli Are Coiled Surface Structures That Assemble Preferentially At Growth Temperatures Below 37 Degrees Celsius. Curli Can Bind To Fibronectin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15099; Mature: 14968

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYCKSLVLSASLLLCCPAVLADTPTSGVGDEMSLSVPLQTLLESSGRDNLIDLFQIGVQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCHHHHHHHCCC
NEAMVAQSGDSNSLIVTQIGVANQALVRQLGTDNEVDLFQAGNHNSAEITQIGDNNLVQL
CCEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCEEEE
KQLGSANFSIQQIGDGASIAVTQY
EECCCCCCEEEECCCCCEEEEEEC
>Mature Secondary Structure 
SYCKSLVLSASLLLCCPAVLADTPTSGVGDEMSLSVPLQTLLESSGRDNLIDLFQIGVQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCHHHHHHHCCC
NEAMVAQSGDSNSLIVTQIGVANQALVRQLGTDNEVDLFQAGNHNSAEITQIGDNNLVQL
CCEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCEEEE
KQLGSANFSIQQIGDGASIAVTQY
EECCCCCCEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA