Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776017

Identifier: 119776017

GI number: 119776017

Start: 3425861

End: 3426055

Strand: Direct

Name: 119776017

Synonym: Sama_2885

Alternate gene names: NA

Gene position: 3425861-3426055 (Clockwise)

Preceding gene: 119776016

Following gene: 119776018

Centisome position: 79.56

GC content: 49.23

Gene sequence:

>195_bases
ATGAACAGAAAGAAGAAAATCAATCAGACCCTGATTGCCAAAGACAAAAAGAAGAAAGCCAAGCTCCACGGCAGCAATAA
GCCAAAGTATGTTTCCAAAGCAGACAGGGAGAGGTTGGCACAGCTGGCGGTTGCTGATGGACCCGAGCTTGGTTCAAGCG
ATGCCGTGGTGAGTGAGCATCAACCTGCCAACTGA

Upstream 100 bases:

>100_bases
GCCAAGACATTTAACCCGCCCACAATTGCTGCTATAGTGCGCCGTCTTTTTACACAGCCCAGCTTGAGCCGCCCTATTAG
CCGTCACCCATTAGCCGCCC

Downstream 100 bases:

>100_bases
GTTAGTACCCTCTTAATCCGGTGGTGATACGTTGAATGTCTCCACCATTCCAGCTCCTATCCAGGTTTACCCAAAGTACA
TTCCAAAAAGTACTTCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MNRKKKINQTLIAKDKKKKAKLHGSNKPKYVSKADRERLAQLAVADGPELGSSDAVVSEHQPAN

Sequences:

>Translated_64_residues
MNRKKKINQTLIAKDKKKKAKLHGSNKPKYVSKADRERLAQLAVADGPELGSSDAVVSEHQPAN
>Mature_64_residues
MNRKKKINQTLIAKDKKKKAKLHGSNKPKYVSKADRERLAQLAVADGPELGSSDAVVSEHQPAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7038; Mature: 7038

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKKKINQTLIAKDKKKKAKLHGSNKPKYVSKADRERLAQLAVADGPELGSSDAVVSEH
CCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
QPAN
CCCC
>Mature Secondary Structure
MNRKKKINQTLIAKDKKKKAKLHGSNKPKYVSKADRERLAQLAVADGPELGSSDAVVSEH
CCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
QPAN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA