| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is 119775921
Identifier: 119775921
GI number: 119775921
Start: 3330173
End: 3330601
Strand: Direct
Name: 119775921
Synonym: Sama_2789
Alternate gene names: NA
Gene position: 3330173-3330601 (Clockwise)
Preceding gene: 119775920
Following gene: 119775923
Centisome position: 77.34
GC content: 53.61
Gene sequence:
>429_bases ATGGTACATCTGGAACACATTAATCTGGTCGTGCATGACCTGGAAAAGAGCCTGAACTTTTACAAAGCCGCCTTTCCCCA TTGGCAGATTCGGGGCGGTGGGGATGGAAGCTGGTATGGCAAACCGCGCCAATGGCTGCACTTTGGCGATGATTATCAAT ACATTGCATTAAATAATGACGGAGAGGGGGAGAGCCGGGATCTCACCGGTCATCAGCCGGGACTGGCCCACTTTGCCTTT GTGGTATCGTCGCTCGATGCCCTGATTGCCCGCCTCGACGCCGCCGGTTTTGCCATTGCCAAAGACGGTGCCCCAGATTC GGGCCGACGCAATGTGTACTTTATCGACCCCGATGGCATGGAAGTGGAGTTTGTGGAATACCTCAGCGATCTGCCTGAAG TTCGCAATCAGTATCCTCAGTCTGTTTAG
Upstream 100 bases:
>100_bases TTTTATGCCGCCGAAAATCGCCTGAATCCCCCCTGGCGGGTGGAAAAACGTAAATACTGAAATCAAATATTCGCACGCAA TAACGACAAGGAACGCAATC
Downstream 100 bases:
>100_bases CCACAGGCGTCAGGTCCGGAGCAAGGGGTTCGAGAAAGAGCCCCACTGTGCTGCTGACATCGACATTGCTTTCCTGCAGG CTTTGATGGGCAAACACATT
Product: glyoxalase family protein
Products: NA
Alternate protein names: Lactoylglutathione Lyase; Glyoxalase Family Protein
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MVHLEHINLVVHDLEKSLNFYKAAFPHWQIRGGGDGSWYGKPRQWLHFGDDYQYIALNNDGEGESRDLTGHQPGLAHFAF VVSSLDALIARLDAAGFAIAKDGAPDSGRRNVYFIDPDGMEVEFVEYLSDLPEVRNQYPQSV
Sequences:
>Translated_142_residues MVHLEHINLVVHDLEKSLNFYKAAFPHWQIRGGGDGSWYGKPRQWLHFGDDYQYIALNNDGEGESRDLTGHQPGLAHFAF VVSSLDALIARLDAAGFAIAKDGAPDSGRRNVYFIDPDGMEVEFVEYLSDLPEVRNQYPQSV >Mature_142_residues MVHLEHINLVVHDLEKSLNFYKAAFPHWQIRGGGDGSWYGKPRQWLHFGDDYQYIALNNDGEGESRDLTGHQPGLAHFAF VVSSLDALIARLDAAGFAIAKDGAPDSGRRNVYFIDPDGMEVEFVEYLSDLPEVRNQYPQSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15978; Mature: 15978
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHLEHINLVVHDLEKSLNFYKAAFPHWQIRGGGDGSWYGKPRQWLHFGDDYQYIALNND CEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCEEEEEECCC GEGESRDLTGHQPGLAHFAFVVSSLDALIARLDAAGFAIAKDGAPDSGRRNVYFIDPDGM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCC EVEFVEYLSDLPEVRNQYPQSV EEHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVHLEHINLVVHDLEKSLNFYKAAFPHWQIRGGGDGSWYGKPRQWLHFGDDYQYIALNND CEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCEEEEEECCC GEGESRDLTGHQPGLAHFAFVVSSLDALIARLDAAGFAIAKDGAPDSGRRNVYFIDPDGM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCC EVEFVEYLSDLPEVRNQYPQSV EEHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA