Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775899

Identifier: 119775899

GI number: 119775899

Start: 3307913

End: 3308335

Strand: Direct

Name: 119775899

Synonym: Sama_2767

Alternate gene names: NA

Gene position: 3307913-3308335 (Clockwise)

Preceding gene: 119775897

Following gene: 119775902

Centisome position: 76.82

GC content: 54.85

Gene sequence:

>423_bases
ATGGAAACCCGCATGATCAAGAAATTTGCCCTGCTGGCCGGCGCACTGACGCTGGTGGGCTGCCAATCATCCCCTCCTCT
TGACGCTGTTGAAGTCAATTTGCTCGGAAGCTGGCACATAGAACAGGTGATGGATCGCCCAGTCATCGACTACAGCCCTG
CAAAACTGGTGTTTGAGGAGGGCAATAAACTCCTTGGCAACAACAGCTGCAATAACTTTTTTGGCAGTTTTGAACTGCAA
GGCCATCAGTTGCTGCTGACCCCTTCGGGCACCACCCGCAAGGCCTGTGTCGATGCCCTGATGGATCAGGAAGCCAGAGT
CGCCGACGCCCTGCCCAAGGTCAGAAAGCTGGCCGATGACCAAGGTAAGTTGCGCCTGCTCGACAGTGAAGGACAAGTGC
TGCTGATTTTAAGCCGCCTCTGA

Upstream 100 bases:

>100_bases
CAATGCAGGATTTTCAGAAATTTCATTACACTTTTCATCTGTTCCACCACATAATCGCCCCTGAACGACGGCATGCCGAC
GTCGCCCGTCAAAGTACAGT

Downstream 100 bases:

>100_bases
GCCCCCGGCTGGCCAAACGTTATTGACCAGGCCCATTTGGCGAGGTCTGCCAGACGCACTGATGCATCCGAGATCACGTA
TCCGAACTCACGCATCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
METRMIKKFALLAGALTLVGCQSSPPLDAVEVNLLGSWHIEQVMDRPVIDYSPAKLVFEEGNKLLGNNSCNNFFGSFELQ
GHQLLLTPSGTTRKACVDALMDQEARVADALPKVRKLADDQGKLRLLDSEGQVLLILSRL

Sequences:

>Translated_140_residues
METRMIKKFALLAGALTLVGCQSSPPLDAVEVNLLGSWHIEQVMDRPVIDYSPAKLVFEEGNKLLGNNSCNNFFGSFELQ
GHQLLLTPSGTTRKACVDALMDQEARVADALPKVRKLADDQGKLRLLDSEGQVLLILSRL
>Mature_140_residues
METRMIKKFALLAGALTLVGCQSSPPLDAVEVNLLGSWHIEQVMDRPVIDYSPAKLVFEEGNKLLGNNSCNNFFGSFELQ
GHQLLLTPSGTTRKACVDALMDQEARVADALPKVRKLADDQGKLRLLDSEGQVLLILSRL

Specific function: Unknown

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15365; Mature: 15365

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRMIKKFALLAGALTLVGCQSSPPLDAVEVNLLGSWHIEQVMDRPVIDYSPAKLVFEE
CCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCEEEEEC
GNKLLGNNSCNNFFGSFELQGHQLLLTPSGTTRKACVDALMDQEARVADALPKVRKLADD
CCEEECCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
QGKLRLLDSEGQVLLILSRL
CCCEEEECCCCCEEEEEECC
>Mature Secondary Structure
METRMIKKFALLAGALTLVGCQSSPPLDAVEVNLLGSWHIEQVMDRPVIDYSPAKLVFEE
CCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCEEEEEC
GNKLLGNNSCNNFFGSFELQGHQLLLTPSGTTRKACVDALMDQEARVADALPKVRKLADD
CCEEECCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
QGKLRLLDSEGQVLLILSRL
CCCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA