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The map label for this gene is yfiC [C]

Identifier: 119775873

GI number: 119775873

Start: 3275568

End: 3276311

Strand: Direct

Name: yfiC [C]

Synonym: Sama_2741

Alternate gene names: 119775873

Gene position: 3275568-3276311 (Clockwise)

Preceding gene: 119775868

Following gene: 119775874

Centisome position: 76.07

GC content: 56.85

Gene sequence:

>744_bases
ATGCCGCCACTGGATAGCGATTGTTTATTTGGCTCAGACACCATGGGATTCAGTTTTAAAGCGTTTCACGTTGATGATTT
CGGTTGCGGTATGCCCGTCAGCACAGACGCCGTGCTTCTGGGGGCCTGGGCCAATCTTGATGGGGCAGATGCGGTGCTCG
ACCTGGGTGCCGGCAGTGGTCTGTTGGCTCTGATGGCAGCCCAGCGCTGCAAGGCGCCCATCACCGCCATTGAAATAGAC
CCGGTGGCCGCCAGTGCGTGTCGCAGTAACTTCAGCGCCAGTCCCTGGCCCGATAGGATAAACCTGATTGAAGCCGATGC
CACTGATGCAGAGGCACTGGCAGGCAAAGTGTTCACTCACATACTCTGTAATCCGCCCTACTTTGAAACCGGCCCCTTGT
CAGAAAAACCCGGCAGGGCCCAGGCAAGACACACCGGCAGCCTGGGATTTTTAGCACTGTGCAAGCTGATAACGACCCAT
TTGAGCACCGAAGGCATTGCCAGCCTGGTGTTACCGGTGGAAAGTGAGCAAGCCTTCAGGCAAGCACTCACTCACCTCGG
GCTCGGCATCAGGCAGCGGGTTGAGGTCAGTACGGTTGAAGGAAAAGCGCCACGGAGACTGCTCTTGGCGGTCAGCCAAG
GAGAGGACAGTTATCAGCATGAACACCTGGCCATCAGGGACGTTCATGGCTGCTACACTGAGGCCATGACGGCCCTGACC
AGGGACTTTTACCTGAAACTGTAA

Upstream 100 bases:

>100_bases
ACAGCGGCCATAAACAAGGTCAGACCAGAGGGCAATAGTCAGCGTCTTATTGTGGACGTTTCCGGGGCTTTTGTGGGGAT
GGACGCTTGATTCTGGTACC

Downstream 100 bases:

>100_bases
CTCCTGGTTTCAGTAACCGATTAAAGCACCTATAATACCGCGCCTGTTAGAGTAGGAATGCCACCATGCTATTTGAAGAT
TTCCAATTGGACCCCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MPPLDSDCLFGSDTMGFSFKAFHVDDFGCGMPVSTDAVLLGAWANLDGADAVLDLGAGSGLLALMAAQRCKAPITAIEID
PVAASACRSNFSASPWPDRINLIEADATDAEALAGKVFTHILCNPPYFETGPLSEKPGRAQARHTGSLGFLALCKLITTH
LSTEGIASLVLPVESEQAFRQALTHLGLGIRQRVEVSTVEGKAPRRLLLAVSQGEDSYQHEHLAIRDVHGCYTEAMTALT
RDFYLKL

Sequences:

>Translated_247_residues
MPPLDSDCLFGSDTMGFSFKAFHVDDFGCGMPVSTDAVLLGAWANLDGADAVLDLGAGSGLLALMAAQRCKAPITAIEID
PVAASACRSNFSASPWPDRINLIEADATDAEALAGKVFTHILCNPPYFETGPLSEKPGRAQARHTGSLGFLALCKLITTH
LSTEGIASLVLPVESEQAFRQALTHLGLGIRQRVEVSTVEGKAPRRLLLAVSQGEDSYQHEHLAIRDVHGCYTEAMTALT
RDFYLKL
>Mature_246_residues
PPLDSDCLFGSDTMGFSFKAFHVDDFGCGMPVSTDAVLLGAWANLDGADAVLDLGAGSGLLALMAAQRCKAPITAIEIDP
VAASACRSNFSASPWPDRINLIEADATDAEALAGKVFTHILCNPPYFETGPLSEKPGRAQARHTGSLGFLALCKLITTHL
STEGIASLVLPVESEQAFRQALTHLGLGIRQRVEVSTVEGKAPRRLLLAVSQGEDSYQHEHLAIRDVHGCYTEAMTALTR
DFYLKL

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val) [H]

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI87082131, Length=232, Percent_Identity=39.6551724137931, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007848
- InterPro:   IPR022882 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.55 [H]

Molecular weight: Translated: 26385; Mature: 26254

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLDSDCLFGSDTMGFSFKAFHVDDFGCGMPVSTDAVLLGAWANLDGADAVLDLGAGSG
CCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHEEECCCCCH
LLALMAAQRCKAPITAIEIDPVAASACRSNFSASPWPDRINLIEADATDAEALAGKVFTH
HHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH
ILCNPPYFETGPLSEKPGRAQARHTGSLGFLALCKLITTHLSTEGIASLVLPVESEQAFR
HHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
QALTHLGLGIRQRVEVSTVEGKAPRRLLLAVSQGEDSYQHEHLAIRDVHGCYTEAMTALT
HHHHHHCCCHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHEEEHHHHHHHHHHHHHHH
RDFYLKL
HHHHCCC
>Mature Secondary Structure 
PPLDSDCLFGSDTMGFSFKAFHVDDFGCGMPVSTDAVLLGAWANLDGADAVLDLGAGSG
CCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHEEECCCCCH
LLALMAAQRCKAPITAIEIDPVAASACRSNFSASPWPDRINLIEADATDAEALAGKVFTH
HHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH
ILCNPPYFETGPLSEKPGRAQARHTGSLGFLALCKLITTHLSTEGIASLVLPVESEQAFR
HHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
QALTHLGLGIRQRVEVSTVEGKAPRRLLLAVSQGEDSYQHEHLAIRDVHGCYTEAMTALT
HHHHHHCCCHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHEEEHHHHHHHHHHHHHHH
RDFYLKL
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA