| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775758
Identifier: 119775758
GI number: 119775758
Start: 3145019
End: 3145228
Strand: Reverse
Name: 119775758
Synonym: Sama_2626
Alternate gene names: NA
Gene position: 3145228-3145019 (Counterclockwise)
Preceding gene: 119775759
Following gene: 119775756
Centisome position: 73.04
GC content: 51.9
Gene sequence:
>210_bases ATGAATCATGTCTACAAGATAATTGAAGTCACAGGTTCCTCTACCCTCAGCAGCGATGATGCCATTCGTAATGCGGTGGC TGCGGCGGCGCAGTCACTGCATCATTTGCGTTGGTTTGAAGTGGTTGAAACCCGCGGTCACCTCGAAGCGGGCGTGATAG CCCACTGGCAGGTGACAGTGAAAATCGGTTTTACCCTGGATACACCTTAG
Upstream 100 bases:
>100_bases TCGTCTGGGCTAAGTCTTACGGCTGAAATCAGAGACTATACTGAGGTAACAGTATCGGGGTGGCTGTCTAAGGCTGCATC CCGTCTTAAGGAGGCTTGCC
Downstream 100 bases:
>100_bases GCGTCTCTGGGCATACCTTTTTCGATGGCGCGTACCAGTCGCGCCGTCTTGCGGCTGTCTTTTGAAAGGACGCTTTGCTG ACGCTTGATGGCCCAGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MNHVYKIIEVTGSSTLSSDDAIRNAVAAAAQSLHHLRWFEVVETRGHLEAGVIAHWQVTVKIGFTLDTP
Sequences:
>Translated_69_residues MNHVYKIIEVTGSSTLSSDDAIRNAVAAAAQSLHHLRWFEVVETRGHLEAGVIAHWQVTVKIGFTLDTP >Mature_69_residues MNHVYKIIEVTGSSTLSSDDAIRNAVAAAAQSLHHLRWFEVVETRGHLEAGVIAHWQVTVKIGFTLDTP
Specific function: Unknown
COG id: COG3360
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7597; Mature: 7597
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHVYKIIEVTGSSTLSSDDAIRNAVAAAAQSLHHLRWFEVVETRGHLEAGVIAHWQVTV CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE KIGFTLDTP EEEEEECCC >Mature Secondary Structure MNHVYKIIEVTGSSTLSSDDAIRNAVAAAAQSLHHLRWFEVVETRGHLEAGVIAHWQVTV CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE KIGFTLDTP EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA