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The map label for this gene is yfiH [H]

Identifier: 119775736

GI number: 119775736

Start: 3117616

End: 3118380

Strand: Reverse

Name: yfiH [H]

Synonym: Sama_2604

Alternate gene names: 119775736

Gene position: 3118380-3117616 (Counterclockwise)

Preceding gene: 119775737

Following gene: 119775735

Centisome position: 72.42

GC content: 54.38

Gene sequence:

>765_bases
ATGTTGCGCCCGCATTGGCCACTACCTCTTGGGGTGAATCTTGCTTTTACCGACCGTAAAGGTGGTATAAGTGAGCCCCC
CTATGACAGCCTTAACCTTGGCTTGCATGTGGGAGATGATTCGGCACGTGTAGCGTTCAATCGCCGTGAGCTTGTCGCGG
CCTTGGCTTTACCTGCCGAACCACTTTGGCTCGAACAGGTGCATGGTACAAAAGTGTACCTGGCCGATGGCAAACAACAG
GATTACGGCAATATTTCAGCCGCAGCTCCCGGTGGCATTAAGCCACCCGTTGCAGATGCCAGTTACACCAAGAGTGCCGG
TACCGTTTGCGCCGTGATGACGGCCGACTGCTTGCCTGTGCTTTTTGCCTCCGCCGATGGTCGAGAGGTTGCGGCTGCCC
ACGCCGGTTGGCGTGGTTTGTGTGATGGCGTACTTGAACAAACTCTGGCGTGTTTCGTTGTTCCCACCGAGCAAATTTAT
GCTTATTTAGGCCCAGCCATTGGTCCTCAAGCCTTTGAGGTAGGGGCGGAGGTTCGCGATGTATTTATGGCACAGGATCC
CGGCTCCGAGGTGTGTTTCAAGGCATCTGGCCACAATAAGTATCTGGCCAATCTTTTTTCACTGGCGAAGCGACGACTGA
TGCATGCCGGTGTGGTGCAGTGTTTCTCGACAGACATATGCACCTATTCTCATCCCAATGATTACTTTTCCTACCGACGC
GACGGCGTAACCGGCCGTATGGCCTCCCTCATCTGGCGGGATTAA

Upstream 100 bases:

>100_bases
GCCCCAATTCCTGAAGACATGGTGCTGTTGACCAAGGCCCTTCGTAAAGATACTGAGGCCAATCCTCAGGACCATATCTA
AGCGCAAGGTGATAGCTGAG

Downstream 100 bases:

>100_bases
CCTCCGTTTTTGTGTGTGATTATTATTTGCGCACTTGAAAATCCCATTGGCAGCCCCATCTTTTAGATAACTACTCTCAG
GTGACCATCCTTAGGTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLRPHWPLPLGVNLAFTDRKGGISEPPYDSLNLGLHVGDDSARVAFNRRELVAALALPAEPLWLEQVHGTKVYLADGKQQ
DYGNISAAAPGGIKPPVADASYTKSAGTVCAVMTADCLPVLFASADGREVAAAHAGWRGLCDGVLEQTLACFVVPTEQIY
AYLGPAIGPQAFEVGAEVRDVFMAQDPGSEVCFKASGHNKYLANLFSLAKRRLMHAGVVQCFSTDICTYSHPNDYFSYRR
DGVTGRMASLIWRD

Sequences:

>Translated_254_residues
MLRPHWPLPLGVNLAFTDRKGGISEPPYDSLNLGLHVGDDSARVAFNRRELVAALALPAEPLWLEQVHGTKVYLADGKQQ
DYGNISAAAPGGIKPPVADASYTKSAGTVCAVMTADCLPVLFASADGREVAAAHAGWRGLCDGVLEQTLACFVVPTEQIY
AYLGPAIGPQAFEVGAEVRDVFMAQDPGSEVCFKASGHNKYLANLFSLAKRRLMHAGVVQCFSTDICTYSHPNDYFSYRR
DGVTGRMASLIWRD
>Mature_254_residues
MLRPHWPLPLGVNLAFTDRKGGISEPPYDSLNLGLHVGDDSARVAFNRRELVAALALPAEPLWLEQVHGTKVYLADGKQQ
DYGNISAAAPGGIKPPVADASYTKSAGTVCAVMTADCLPVLFASADGREVAAAHAGWRGLCDGVLEQTLACFVVPTEQIY
AYLGPAIGPQAFEVGAEVRDVFMAQDPGSEVCFKASGHNKYLANLFSLAKRRLMHAGVVQCFSTDICTYSHPNDYFSYRR
DGVTGRMASLIWRD

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=242, Percent_Identity=25.6198347107438, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI190194372, Length=242, Percent_Identity=25.6198347107438, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1788945, Length=252, Percent_Identity=54.7619047619048, Blast_Score=264, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27404; Mature: 27404

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPHWPLPLGVNLAFTDRKGGISEPPYDSLNLGLHVGDDSARVAFNRRELVAALALPAE
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHCCCC
PLWLEQVHGTKVYLADGKQQDYGNISAAAPGGIKPPVADASYTKSAGTVCAVMTADCLPV
CCCHHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH
LFASADGREVAAAHAGWRGLCDGVLEQTLACFVVPTEQIYAYLGPAIGPQAFEVGAEVRD
HHCCCCCCEEHHHHCCHHHHHHHHHHHHHEEEEECHHHHHHHHCCCCCHHHHHHHHHHHH
VFMAQDPGSEVCFKASGHNKYLANLFSLAKRRLMHAGVVQCFSTDICTYSHPNDYFSYRR
HEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
DGVTGRMASLIWRD
CCCCHHHHHHHCCC
>Mature Secondary Structure
MLRPHWPLPLGVNLAFTDRKGGISEPPYDSLNLGLHVGDDSARVAFNRRELVAALALPAE
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHCCCC
PLWLEQVHGTKVYLADGKQQDYGNISAAAPGGIKPPVADASYTKSAGTVCAVMTADCLPV
CCCHHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH
LFASADGREVAAAHAGWRGLCDGVLEQTLACFVVPTEQIYAYLGPAIGPQAFEVGAEVRD
HHCCCCCCEEHHHHCCHHHHHHHHHHHHHEEEEECHHHHHHHHCCCCCHHHHHHHHHHHH
VFMAQDPGSEVCFKASGHNKYLANLFSLAKRRLMHAGVVQCFSTDICTYSHPNDYFSYRR
HEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
DGVTGRMASLIWRD
CCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]