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The map label for this gene is dps [C]

Identifier: 119775730

GI number: 119775730

Start: 3104418

End: 3104891

Strand: Direct

Name: dps [C]

Synonym: Sama_2598

Alternate gene names: 119775730

Gene position: 3104418-3104891 (Clockwise)

Preceding gene: 119775727

Following gene: 119775733

Centisome position: 72.09

GC content: 52.32

Gene sequence:

>474_bases
ATGATCAACAACGGTATCGACCAACAAAATCGCCTCGCCATCGCCATCGCCAAAGGTCTCTATAAGCTATTGGCTGACAG
CTATGGCCTGTATCTCAAGACCCACAGCTTTCACTGGAACGTAACCGGCCCTATGTTCACCAGTCTGCACCTCATGTTTG
AGCAGCAGTATACCGAACTTGCCCTCGCCGTGGACAGTATTGCAGAGCGGGTTAGGGCCTTGGGTGTAAAAGCCATAGGC
TCCTACAGCGCCTTTGCCGCCGTAACCGACATTCAGGAAGACACTGGCAGCCTCAATGCAAGAGACATGATTAGCAGCCT
GATAGAAGGCCAGGAAATTATTATCCGCAGTGCCAGAACCCTCATCCCGCTCGCGGCAGAAAGTAGTGACGACGCCTCGG
TGGATTTGCTCACCCAAAGGGTCAGTATCCATGAAAAGAACGCCTGGATGCTAAGAAGCCTGTTGGAGGACTAA

Upstream 100 bases:

>100_bases
ATCCTCTTTATCGAACCGAACACTTTAATCTATTATTTCAATTTCAAATGAATTTTTTAATTTATTATTCTAATTAAATC
AAAAACAGGAGGAGACTATT

Downstream 100 bases:

>100_bases
ATCGCTGCCCGATTGCAACGTAAAGCGGGGATGCAAATTACTCGAACGCTGAAAAGACGAAAGGCCGTTCATTTCTGAAC
GGCCTTTCTGGCATATGGCA

Product: Dps family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MINNGIDQQNRLAIAIAKGLYKLLADSYGLYLKTHSFHWNVTGPMFTSLHLMFEQQYTELALAVDSIAERVRALGVKAIG
SYSAFAAVTDIQEDTGSLNARDMISSLIEGQEIIIRSARTLIPLAAESSDDASVDLLTQRVSIHEKNAWMLRSLLED

Sequences:

>Translated_157_residues
MINNGIDQQNRLAIAIAKGLYKLLADSYGLYLKTHSFHWNVTGPMFTSLHLMFEQQYTELALAVDSIAERVRALGVKAIG
SYSAFAAVTDIQEDTGSLNARDMISSLIEGQEIIIRSARTLIPLAAESSDDASVDLLTQRVSIHEKNAWMLRSLLED
>Mature_157_residues
MINNGIDQQNRLAIAIAKGLYKLLADSYGLYLKTHSFHWNVTGPMFTSLHLMFEQQYTELALAVDSIAERVRALGVKAIG
SYSAFAAVTDIQEDTGSLNARDMISSLIEGQEIIIRSARTLIPLAAESSDDASVDLLTQRVSIHEKNAWMLRSLLED

Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 17371; Mature: 17371

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNGIDQQNRLAIAIAKGLYKLLADSYGLYLKTHSFHWNVTGPMFTSLHLMFEQQYTEL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHH
ALAVDSIAERVRALGVKAIGSYSAFAAVTDIQEDTGSLNARDMISSLIEGQEIIIRSART
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH
LIPLAAESSDDASVDLLTQRVSIHEKNAWMLRSLLED
HEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MINNGIDQQNRLAIAIAKGLYKLLADSYGLYLKTHSFHWNVTGPMFTSLHLMFEQQYTEL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHH
ALAVDSIAERVRALGVKAIGSYSAFAAVTDIQEDTGSLNARDMISSLIEGQEIIIRSART
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH
LIPLAAESSDDASVDLLTQRVSIHEKNAWMLRSLLED
HEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]