| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mltB [H]
Identifier: 119775722
GI number: 119775722
Start: 3098349
End: 3099338
Strand: Direct
Name: mltB [H]
Synonym: Sama_2590
Alternate gene names: 119775722
Gene position: 3098349-3099338 (Clockwise)
Preceding gene: 119775721
Following gene: 119775723
Centisome position: 71.95
GC content: 53.54
Gene sequence:
>990_bases ATGAGTTTTGCCCCAGGCCTGGCCTTGTTGTCAGGCCTTCTTGCCGCCAATCTTGTGCTCGCTGCCGAGACACAAATCGA CACTGCCAGGGACAGTTTTATTTCCCGCCAGAGTGCACTTGGCTTTTCCCAATCTCAAATCGATGCATTTCTGGCCGGCG CCCAATATAACCCCAAGGTGATTGAAGCCATCAGCCGCCCCTGGGAAGCCAAACCCTGGCATCTCTACCGACCACGCTTT CTCACCGAGACGAGGCTCAAGGCAGGGCTCGAGTTCTGGCGAACTCACGAGAGCACCATCGACAGGGCATCGACGCAGTT TGGCGTTGAGCCGGAGATGATTGTGGCCATTATCGGCATCGAAACCCATTACGGCCAAACCATGGGTAACTACAGTGTGC GCGATGCCCTCTACACCCTTGGGTTTTACTACCCACCCAGGGCCAGTTTTTTTCTTAAAGAATTGGGCGAGCTTCAAAAA CTTGAGCAGGAAGAAAAACTCGATGTGAGCGCATTGAAAGGCTCCTACGCCGGTGCCATAGGGTTTGGACAGTTTATGCC CTCCAGCTACCGCTACTATGGGGTCGATTTTGACGGTGATGGCCGCAAAGACTTGCTCGGCAGCCCCGCCGATGCCATCG GCAGTGTGGCCAATTATTTTCATCAACATGGCTGGCAAACCGGTGACCCTGTCGCGTTTCGCTTGGAAAGCTACGGAGAA ACACCGCCGACAGCCTCGCTCTGGCAGGGAGAGCCGTTAACCCTCAAGGCATCCGATATACTCGCAGACGGCTTCGGCCT TGCGGACAAACGGGATCTGGATGTTGCCCGGCCTGCAATGCTGTTTAAACTGGAGCAGGAAACTCACAACGAATACTGGA TGGGTTTTAAGAATTTTTTCGTAATCACCCGTTATAATCGCAGCCCTCTTTACGCCATGGCGGCCTATGAATTCAGTGAG CAGCTTAAACATGCGCATGCCAAGTATTAA
Upstream 100 bases:
>100_bases TAGCTATGGCGGCACCTCGATGCTGACATTGATGACAGGTTTTGGCATTCTAATGAGCATTCAAACCCACAGGCGCTTTG TCGACCGCTAAGGAATGCCG
Downstream 100 bases:
>100_bases ATCCTGTTGGCCGTTATTGGCTCTGACACTCATTCTGGGTGGTTGCTCTTCCTCGCCGGAGCCCGGGAGCAGCACTAAAA CCAGTACCAAGGGGGACAGG
Product: lytic murein transglycosylase B
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSFAPGLALLSGLLAANLVLAAETQIDTARDSFISRQSALGFSQSQIDAFLAGAQYNPKVIEAISRPWEAKPWHLYRPRF LTETRLKAGLEFWRTHESTIDRASTQFGVEPEMIVAIIGIETHYGQTMGNYSVRDALYTLGFYYPPRASFFLKELGELQK LEQEEKLDVSALKGSYAGAIGFGQFMPSSYRYYGVDFDGDGRKDLLGSPADAIGSVANYFHQHGWQTGDPVAFRLESYGE TPPTASLWQGEPLTLKASDILADGFGLADKRDLDVARPAMLFKLEQETHNEYWMGFKNFFVITRYNRSPLYAMAAYEFSE QLKHAHAKY
Sequences:
>Translated_329_residues MSFAPGLALLSGLLAANLVLAAETQIDTARDSFISRQSALGFSQSQIDAFLAGAQYNPKVIEAISRPWEAKPWHLYRPRF LTETRLKAGLEFWRTHESTIDRASTQFGVEPEMIVAIIGIETHYGQTMGNYSVRDALYTLGFYYPPRASFFLKELGELQK LEQEEKLDVSALKGSYAGAIGFGQFMPSSYRYYGVDFDGDGRKDLLGSPADAIGSVANYFHQHGWQTGDPVAFRLESYGE TPPTASLWQGEPLTLKASDILADGFGLADKRDLDVARPAMLFKLEQETHNEYWMGFKNFFVITRYNRSPLYAMAAYEFSE QLKHAHAKY >Mature_328_residues SFAPGLALLSGLLAANLVLAAETQIDTARDSFISRQSALGFSQSQIDAFLAGAQYNPKVIEAISRPWEAKPWHLYRPRFL TETRLKAGLEFWRTHESTIDRASTQFGVEPEMIVAIIGIETHYGQTMGNYSVRDALYTLGFYYPPRASFFLKELGELQKL EQEEKLDVSALKGSYAGAIGFGQFMPSSYRYYGVDFDGDGRKDLLGSPADAIGSVANYFHQHGWQTGDPVAFRLESYGET PPTASLWQGEPLTLKASDILADGFGLADKRDLDVARPAMLFKLEQETHNEYWMGFKNFFVITRYNRSPLYAMAAYEFSEQ LKHAHAKY
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=256, Percent_Identity=43.359375, Blast_Score=201, Evalue=7e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 36942; Mature: 36811
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAPGLALLSGLLAANLVLAAETQIDTARDSFISRQSALGFSQSQIDAFLAGAQYNPKV CCCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH IEAISRPWEAKPWHLYRPRFLTETRLKAGLEFWRTHESTIDRASTQFGVEPEMIVAIIGI HHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE ETHYGQTMGNYSVRDALYTLGFYYPPRASFFLKELGELQKLEQEEKLDVSALKGSYAGAI EHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC GFGQFMPSSYRYYGVDFDGDGRKDLLGSPADAIGSVANYFHQHGWQTGDPVAFRLESYGE HHHHCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC TPPTASLWQGEPLTLKASDILADGFGLADKRDLDVARPAMLFKLEQETHNEYWMGFKNFF CCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCHHCHHHHEEEHHHHCCHHHCCEEEEE VITRYNRSPLYAMAAYEFSEQLKHAHAKY EEEEECCCCEEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFAPGLALLSGLLAANLVLAAETQIDTARDSFISRQSALGFSQSQIDAFLAGAQYNPKV CCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH IEAISRPWEAKPWHLYRPRFLTETRLKAGLEFWRTHESTIDRASTQFGVEPEMIVAIIGI HHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE ETHYGQTMGNYSVRDALYTLGFYYPPRASFFLKELGELQKLEQEEKLDVSALKGSYAGAI EHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC GFGQFMPSSYRYYGVDFDGDGRKDLLGSPADAIGSVANYFHQHGWQTGDPVAFRLESYGE HHHHCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC TPPTASLWQGEPLTLKASDILADGFGLADKRDLDVARPAMLFKLEQETHNEYWMGFKNFF CCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCHHCHHHHEEEHHHHCCHHHCCEEEEE VITRYNRSPLYAMAAYEFSEQLKHAHAKY EEEEECCCCEEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]