Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775683

Identifier: 119775683

GI number: 119775683

Start: 3059646

End: 3060629

Strand: Reverse

Name: 119775683

Synonym: Sama_2551

Alternate gene names: NA

Gene position: 3060629-3059646 (Counterclockwise)

Preceding gene: 119775684

Following gene: 119775682

Centisome position: 71.08

GC content: 56.4

Gene sequence:

>984_bases
ATGGCTGCCGGGCGTCCCTGTTTTGGGCATTTCGATGGCCCGGTTGCGTCTTTGGGGCTCGATGACTTTATCCTGATGAA
CGACATGGATAAGCCTGCCTCCCGCTTGCAACGCCATTTTGGCTATAAGCAGTTCGAGTTTATTGCCGTTAACACCCCCA
ATTACCTGATAGGCATCGCCCTGGCTGATATTCGCTATCTCGGCAGCGGCTTTTGCTACGTCTACGATGTCAGCAAAAAA
CGTGTGTATGAGAAGCATTGGATAAGGCCACCGGGCAGCTTCAGCCTTGGCCCGTCGCCTGTGTCGGCATCCAGTTCCAT
GGCTGGTGTCAGTATTCACCGCCGGGATGGTCGCTGGTCGGTGGCGCTGGATTTGGTGCTGGACACACTGCCGCTGAAGG
CCGAGTTACAACTGGACGCAATGCCGCTGTCGCTGCCCATGGCCCTTTGCAGCCCTACCGGCTACAGCGGCTGGACGTAC
ACCCAAAAGCACAACGCCTTGAGTGTCAAAGGCAGCCTTTATATCAATCACGAGCCGCAACCCCTCGGGCGTGCGCTCGC
AGGATACGATTTTTCAGCAGGCTACATGCGCCGGGAAACCAGTTGGCGCTGGGCCTCCATTAACGCCCATGTGGGTAACA
GCCTGCTGGGGCTCAATATTGCCGCAGGGGTAAATGAAACCGGTAGCAGTGAAAACGTGCTTTGGCTCGATGGCGTGCGT
AAACACCTGGGGCCTGTGCATTTCGAATTTGACCGCAGCCAGGCTGAACATGGCCGCTGGCGCTTGTGGTCTGAGCGGGA
TGAGCTTGAACTCGAATTTACGCCCCAGGCCTGCCGCTCTGAGCGGCTTAACCTGATACTGCTGAAAAGCAACTTCCGCC
AGTATCAGGGACACTTTTCGGGATGGGTACGTGATGTGGAAGGGGGCAAGGTTCACCTCGATAGGGTGCTCGGACTCACC
GAAGATCATTTTGCCAAGTGGTAA

Upstream 100 bases:

>100_bases
AACCAAAAAAATAATAAATTGTACGATGGAACATTCAACAAGCACACCAGGGATGACCAATTCAGCCACATTCAAAACCT
TGGGGATCCAGGATTGCCTG

Downstream 100 bases:

>100_bases
GTGCACACTGCACCAGGAATAGAAAAGCAAGAACAACAAGTGGCCCACAAGTGTCAGGACTTTTGGGCACAGACAACAGG
GAAGATAATGAACCTCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MAAGRPCFGHFDGPVASLGLDDFILMNDMDKPASRLQRHFGYKQFEFIAVNTPNYLIGIALADIRYLGSGFCYVYDVSKK
RVYEKHWIRPPGSFSLGPSPVSASSSMAGVSIHRRDGRWSVALDLVLDTLPLKAELQLDAMPLSLPMALCSPTGYSGWTY
TQKHNALSVKGSLYINHEPQPLGRALAGYDFSAGYMRRETSWRWASINAHVGNSLLGLNIAAGVNETGSSENVLWLDGVR
KHLGPVHFEFDRSQAEHGRWRLWSERDELELEFTPQACRSERLNLILLKSNFRQYQGHFSGWVRDVEGGKVHLDRVLGLT
EDHFAKW

Sequences:

>Translated_327_residues
MAAGRPCFGHFDGPVASLGLDDFILMNDMDKPASRLQRHFGYKQFEFIAVNTPNYLIGIALADIRYLGSGFCYVYDVSKK
RVYEKHWIRPPGSFSLGPSPVSASSSMAGVSIHRRDGRWSVALDLVLDTLPLKAELQLDAMPLSLPMALCSPTGYSGWTY
TQKHNALSVKGSLYINHEPQPLGRALAGYDFSAGYMRRETSWRWASINAHVGNSLLGLNIAAGVNETGSSENVLWLDGVR
KHLGPVHFEFDRSQAEHGRWRLWSERDELELEFTPQACRSERLNLILLKSNFRQYQGHFSGWVRDVEGGKVHLDRVLGLT
EDHFAKW
>Mature_326_residues
AAGRPCFGHFDGPVASLGLDDFILMNDMDKPASRLQRHFGYKQFEFIAVNTPNYLIGIALADIRYLGSGFCYVYDVSKKR
VYEKHWIRPPGSFSLGPSPVSASSSMAGVSIHRRDGRWSVALDLVLDTLPLKAELQLDAMPLSLPMALCSPTGYSGWTYT
QKHNALSVKGSLYINHEPQPLGRALAGYDFSAGYMRRETSWRWASINAHVGNSLLGLNIAAGVNETGSSENVLWLDGVRK
HLGPVHFEFDRSQAEHGRWRLWSERDELELEFTPQACRSERLNLILLKSNFRQYQGHFSGWVRDVEGGKVHLDRVLGLTE
DHFAKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36785; Mature: 36654

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGRPCFGHFDGPVASLGLDDFILMNDMDKPASRLQRHFGYKQFEFIAVNTPNYLIGIA
CCCCCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEE
LADIRYLGSGFCYVYDVSKKRVYEKHWIRPPGSFSLGPSPVSASSSMAGVSIHRRDGRWS
HHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
VALDLVLDTLPLKAELQLDAMPLSLPMALCSPTGYSGWTYTQKHNALSVKGSLYINHEPQ
EEEEEEHHCCCCEEEEEEECCCCCCCHHHHCCCCCCCCEEEECCCEEEEEEEEEECCCCC
PLGRALAGYDFSAGYMRRETSWRWASINAHVGNSLLGLNIAAGVNETGSSENVLWLDGVR
HHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCHH
KHLGPVHFEFDRSQAEHGRWRLWSERDELELEFTPQACRSERLNLILLKSNFRQYQGHFS
HHCCCEEEEECCCCCCCCCEEEECCCCCEEEEECCHHHHCCCCEEEEEECCHHHHHCHHH
GWVRDVEGGKVHLDRVLGLTEDHFAKW
HEEEECCCCEEEEEHHHCCCHHHHCCC
>Mature Secondary Structure 
AAGRPCFGHFDGPVASLGLDDFILMNDMDKPASRLQRHFGYKQFEFIAVNTPNYLIGIA
CCCCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEE
LADIRYLGSGFCYVYDVSKKRVYEKHWIRPPGSFSLGPSPVSASSSMAGVSIHRRDGRWS
HHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
VALDLVLDTLPLKAELQLDAMPLSLPMALCSPTGYSGWTYTQKHNALSVKGSLYINHEPQ
EEEEEEHHCCCCEEEEEEECCCCCCCHHHHCCCCCCCCEEEECCCEEEEEEEEEECCCCC
PLGRALAGYDFSAGYMRRETSWRWASINAHVGNSLLGLNIAAGVNETGSSENVLWLDGVR
HHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCHH
KHLGPVHFEFDRSQAEHGRWRLWSERDELELEFTPQACRSERLNLILLKSNFRQYQGHFS
HHCCCEEEEECCCCCCCCCEEEECCCCCEEEEECCHHHHCCCCEEEEEECCHHHHHCHHH
GWVRDVEGGKVHLDRVLGLTEDHFAKW
HEEEECCCCEEEEEHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA