| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is proA
Identifier: 119775647
GI number: 119775647
Start: 3020498
End: 3021760
Strand: Reverse
Name: proA
Synonym: Sama_2515
Alternate gene names: 119775647
Gene position: 3021760-3020498 (Counterclockwise)
Preceding gene: 119775648
Following gene: 119775645
Centisome position: 70.17
GC content: 55.34
Gene sequence:
>1263_bases ATGGACGCTCAGGCTTATTTATTGCAGTTGGGTCAGGCCGCCAAGAGCTCAGGTTTTGCACTGGCAAACCTTGGCGTAAT GGCCAAAAATCGCTTGCTGGGCCGGGTCGCCGCCGAACTTAAGTCGGCATTCGATGAGATTTTGGCTGCCAATGCCAAAG ATGTGGCGGCTGCCCGAGCTTCGGGTTTGGGCGATGCCATGGTCGACCGGCTGCTGCTCAATGACGATAGGCTTAAGGGC ATTATCGCCGATATCGATAATGTGATTTCCCTTGCCGACCCCATAGGTGAAGAGTTTGACAGTCGACTGTTGGATAACGG TATGCGCCTGTGTCGTCGCCGTGTACCTCTGGGTGTGATTGGTGTTATTTACGAGGCCCGTCCCAACGTCACCGTGGAGA TTGCGGTGCTGGCGCTGAAAACCGGTAACGCCGTCATTCTTCGTGGTGGTAAAGAAACCCTTGAGTCAAACCTGGCCCTT GCCGCCGCCATTCGCCGTGCATTGGCCGGTGAAGGTTTGCCGGAAGATTGTGTGCAGCTGATAGATAATCCCGACCGCGC CCTGGTCACTGGCCTGTTGAAGCTGGATAAATTCGTCGACATGATAGTGCCCAGAGGTGGTCAGGGGTTACAGCGGCTTT GTGCTGAGCAGGCCACCATTCCAGTGATTTTGGGGGGCATTGGCATCTGCCATCTGTACCTGGATAGGGATGCCGATATC AGTCGCGCTGCCAATGTGATTATCAATGCGAAGGTGCAGCGTCCTACAGTATGCAATGCGCTGGACACCTTACTTATTCA CCGGGATAAACTCGACTGGTTGCCTACACTCGCCAGAGCGCTTCAGCAACAAGGCGTGAAGCTGGTGGCCTGCGAGCAAA GCCTGGGTGCTCTCGCCGCTGCGGGTATCGAGGCAGAAGCAGCCAGCGATGAGAGTTTTGGCACCGAGTGGCTCTCACTC ACTCTGGGGGTGAAGGTGGTTGCGGATATCGATGAGGCCATTGCCCATATTCGTCACTACTCCTCCGGGCATTCGGAGGC GATTCTGACTGACAATCTCGCTGCAGCGACCCACTTTATGAATGAAGTTAACTCGGCCGCCGTGTACCTCAATGCATCCA CCCGTTTTACCGATGGTGGTCAGTTTGGCTTTGGCGCAGAGGTGGCGGTCAGCACTCAAAAACTTCACGCAAGGGGGCCC ATGGGACTTGAGGCTTTGACCACCTATAAGTGGCTGGGAGTTGGGGATTACAGCTGTCGATAA
Upstream 100 bases:
>100_bases ACTCTGATGAGATTGAGCCACTGCTTGGTTATGACTATGGCGATGCCGTGGTGCATCGCAACGATATGGTGGTGTTGGAA ATGATTGGGGAGGCCAAGTG
Downstream 100 bases:
>100_bases ATTGTAAGTACTGAATATCAAGCATTAAAAAAGCCGCATTAAGCGGCTTTTTTAATAGCTAATCCCGGCTGCGCTTCATT TGCAACTATGCTGCATCGCT
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MDAQAYLLQLGQAAKSSGFALANLGVMAKNRLLGRVAAELKSAFDEILAANAKDVAAARASGLGDAMVDRLLLNDDRLKG IIADIDNVISLADPIGEEFDSRLLDNGMRLCRRRVPLGVIGVIYEARPNVTVEIAVLALKTGNAVILRGGKETLESNLAL AAAIRRALAGEGLPEDCVQLIDNPDRALVTGLLKLDKFVDMIVPRGGQGLQRLCAEQATIPVILGGIGICHLYLDRDADI SRAANVIINAKVQRPTVCNALDTLLIHRDKLDWLPTLARALQQQGVKLVACEQSLGALAAAGIEAEAASDESFGTEWLSL TLGVKVVADIDEAIAHIRHYSSGHSEAILTDNLAAATHFMNEVNSAAVYLNASTRFTDGGQFGFGAEVAVSTQKLHARGP MGLEALTTYKWLGVGDYSCR
Sequences:
>Translated_420_residues MDAQAYLLQLGQAAKSSGFALANLGVMAKNRLLGRVAAELKSAFDEILAANAKDVAAARASGLGDAMVDRLLLNDDRLKG IIADIDNVISLADPIGEEFDSRLLDNGMRLCRRRVPLGVIGVIYEARPNVTVEIAVLALKTGNAVILRGGKETLESNLAL AAAIRRALAGEGLPEDCVQLIDNPDRALVTGLLKLDKFVDMIVPRGGQGLQRLCAEQATIPVILGGIGICHLYLDRDADI SRAANVIINAKVQRPTVCNALDTLLIHRDKLDWLPTLARALQQQGVKLVACEQSLGALAAAGIEAEAASDESFGTEWLSL TLGVKVVADIDEAIAHIRHYSSGHSEAILTDNLAAATHFMNEVNSAAVYLNASTRFTDGGQFGFGAEVAVSTQKLHARGP MGLEALTTYKWLGVGDYSCR >Mature_420_residues MDAQAYLLQLGQAAKSSGFALANLGVMAKNRLLGRVAAELKSAFDEILAANAKDVAAARASGLGDAMVDRLLLNDDRLKG IIADIDNVISLADPIGEEFDSRLLDNGMRLCRRRVPLGVIGVIYEARPNVTVEIAVLALKTGNAVILRGGKETLESNLAL AAAIRRALAGEGLPEDCVQLIDNPDRALVTGLLKLDKFVDMIVPRGGQGLQRLCAEQATIPVILGGIGICHLYLDRDADI SRAANVIINAKVQRPTVCNALDTLLIHRDKLDWLPTLARALQQQGVKLVACEQSLGALAAAGIEAEAASDESFGTEWLSL TLGVKVVADIDEAIAHIRHYSSGHSEAILTDNLAAATHFMNEVNSAAVYLNASTRFTDGGQFGFGAEVAVSTQKLHARGP MGLEALTTYKWLGVGDYSCR
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family
Homologues:
Organism=Homo sapiens, GI62912457, Length=409, Percent_Identity=37.1638141809291, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI21361368, Length=409, Percent_Identity=37.1638141809291, Blast_Score=249, Evalue=4e-66, Organism=Escherichia coli, GI1786438, Length=415, Percent_Identity=58.5542168674699, Blast_Score=486, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17569967, Length=413, Percent_Identity=36.319612590799, Blast_Score=260, Evalue=9e-70, Organism=Caenorhabditis elegans, GI17569969, Length=413, Percent_Identity=36.319612590799, Blast_Score=260, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6324899, Length=425, Percent_Identity=37.6470588235294, Blast_Score=278, Evalue=1e-75, Organism=Drosophila melanogaster, GI21357643, Length=375, Percent_Identity=38.6666666666667, Blast_Score=249, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROA_SHEAM (A1S8L1)
Other databases:
- EMBL: CP000507 - RefSeq: YP_928387.1 - ProteinModelPortal: A1S8L1 - SMR: A1S8L1 - STRING: A1S8L1 - GeneID: 4604762 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_2515 - NMPDR: fig|326297.7.peg.2355 - eggNOG: COG0014 - HOGENOM: HBG318080 - OMA: QYPAACN - PhylomeDB: A1S8L1 - ProtClustDB: PRK00197 - GO: GO:0005737 - HAMAP: MF_00412 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 - Gene3D: G3DSA:3.40.309.10 - Gene3D: G3DSA:3.40.605.10 - PANTHER: PTHR11063:SF1 - PIRSF: PIRSF000151 - TIGRFAMs: TIGR00407
Pfam domain/function: PF00171 Aldedh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.2.1.41
Molecular weight: Translated: 44639; Mature: 44639
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQAYLLQLGQAAKSSGFALANLGVMAKNRLLGRVAAELKSAFDEILAANAKDVAAARA CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SGLGDAMVDRLLLNDDRLKGIIADIDNVISLADPIGEEFDSRLLDNGMRLCRRRVPLGVI CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GVIYEARPNVTVEIAVLALKTGNAVILRGGKETLESNLALAAAIRRALAGEGLPEDCVQL EEEEECCCCCEEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IDNPDRALVTGLLKLDKFVDMIVPRGGQGLQRLCAEQATIPVILGGIGICHLYLDRDADI HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCH SRAANVIINAKVQRPTVCNALDTLLIHRDKLDWLPTLARALQQQGVKLVACEQSLGALAA HHHCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHH AGIEAEAASDESFGTEWLSLTLGVKVVADIDEAIAHIRHYSSGHSEAILTDNLAAATHFM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH NEVNSAAVYLNASTRFTDGGQFGFGAEVAVSTQKLHARGPMGLEALTTYKWLGVGDYSCR HHCCCEEEEEECCCEECCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHEEEEECCCCCCC >Mature Secondary Structure MDAQAYLLQLGQAAKSSGFALANLGVMAKNRLLGRVAAELKSAFDEILAANAKDVAAARA CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SGLGDAMVDRLLLNDDRLKGIIADIDNVISLADPIGEEFDSRLLDNGMRLCRRRVPLGVI CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GVIYEARPNVTVEIAVLALKTGNAVILRGGKETLESNLALAAAIRRALAGEGLPEDCVQL EEEEECCCCCEEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IDNPDRALVTGLLKLDKFVDMIVPRGGQGLQRLCAEQATIPVILGGIGICHLYLDRDADI HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCH SRAANVIINAKVQRPTVCNALDTLLIHRDKLDWLPTLARALQQQGVKLVACEQSLGALAA HHHCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHH AGIEAEAASDESFGTEWLSLTLGVKVVADIDEAIAHIRHYSSGHSEAILTDNLAAATHFM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH NEVNSAAVYLNASTRFTDGGQFGFGAEVAVSTQKLHARGPMGLEALTTYKWLGVGDYSCR HHCCCEEEEEECCCEECCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA