| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yfcG [H]
Identifier: 119775641
GI number: 119775641
Start: 3014059
End: 3014685
Strand: Direct
Name: yfcG [H]
Synonym: Sama_2509
Alternate gene names: 119775641
Gene position: 3014059-3014685 (Clockwise)
Preceding gene: 119775627
Following gene: 119775644
Centisome position: 69.99
GC content: 53.59
Gene sequence:
>627_bases ATGATTACCCTCTATGGCACCCCCAATACCCGCTCAGTGCGCGTACTCTGGGCATTGGAAGAAACAGGCATCGCCTATGA TTACCGCAAGATGGATCTTAAAGGGGGCGAGTGCCGGCAAGCTGAGTATCTTGCCATCAACCCCAATGGCAAGGTGCCCG CGCTGGTTGATGGGGATCTGACCCTGCTGGAGACCAATGCCATTTGCCATTACATCGCCGAACTGGGCACTGATTTGCTG CCAAACGATATAAAGGCCAGGGCTAAAGTCCGCCAGTGGAATGATTTTGCCCTGTCAGAGCTGGAAGTTGCCCCCTGGAT GCTGCTGAAAAACCAGCTTATCTATCCTTCAGATGAACGACTGGCCCCAGAGGCGCTTCGAAGCACCATGGTGTGGGAAA GCCAGCGCGCCCAGGGAATTCTGATCTTGGCACTTGAACATCAGGACTATCTGCTGCCAACGGGTTTCAGTCTCGCCGAT ATCCATATCTGTGTTGGGCTGCTCATGCATTTTAAAACCGATTTACCGCTGAGACCTGAGCTTTTGCCTTATCTCAAGCG CTGTATGTCACGTCCGGCGATAGCCAGATTGCAGGCCATGGGCGAATTGCCCCCCTTGCCTCTTTAG
Upstream 100 bases:
>100_bases TTGGCATTTGTCACTTCTCGCATTTATTTGGGCAAATATGACCATTAATCGCTGCCAGCGCAAGCTCTACACTGGACGAA ACCATCAACAAGGAGTTTGT
Downstream 100 bases:
>100_bases GCAGTCGTTTGAAAGTGCGATGCACACAGACAATAAAAAGCCCGGCATTGGCCGGGCTTTTCAGTGTCAGGGATGAGATC AGTTATTCAGATCCTGAAAG
Product: glutathione S-transferase-like protein
Products: HX; R-S-glutathione
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDLTLLETNAICHYIAELGTDLL PNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDERLAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLAD IHICVGLLMHFKTDLPLRPELLPYLKRCMSRPAIARLQAMGELPPLPL
Sequences:
>Translated_208_residues MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDLTLLETNAICHYIAELGTDLL PNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDERLAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLAD IHICVGLLMHFKTDLPLRPELLPYLKRCMSRPAIARLQAMGELPPLPL >Mature_208_residues MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDLTLLETNAICHYIAELGTDLL PNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDERLAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLAD IHICVGLLMHFKTDLPLRPELLPYLKRCMSRPAIARLQAMGELPPLPL
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=207, Percent_Identity=32.8502415458937, Blast_Score=78, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 23495; Mature: 23495
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDL CEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEECCCE TLLETNAICHYIAELGTDLLPNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDER EEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC LAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLADIHICVGLLMHFKTDLPLRPE CCHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHH LLPYLKRCMSRPAIARLQAMGELPPLPL HHHHHHHHHCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDL CEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEECCCE TLLETNAICHYIAELGTDLLPNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDER EEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC LAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLADIHICVGLLMHFKTDLPLRPE CCHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHH LLPYLKRCMSRPAIARLQAMGELPPLPL HHHHHHHHHCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]