Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is yfcG [H]

Identifier: 119775641

GI number: 119775641

Start: 3014059

End: 3014685

Strand: Direct

Name: yfcG [H]

Synonym: Sama_2509

Alternate gene names: 119775641

Gene position: 3014059-3014685 (Clockwise)

Preceding gene: 119775627

Following gene: 119775644

Centisome position: 69.99

GC content: 53.59

Gene sequence:

>627_bases
ATGATTACCCTCTATGGCACCCCCAATACCCGCTCAGTGCGCGTACTCTGGGCATTGGAAGAAACAGGCATCGCCTATGA
TTACCGCAAGATGGATCTTAAAGGGGGCGAGTGCCGGCAAGCTGAGTATCTTGCCATCAACCCCAATGGCAAGGTGCCCG
CGCTGGTTGATGGGGATCTGACCCTGCTGGAGACCAATGCCATTTGCCATTACATCGCCGAACTGGGCACTGATTTGCTG
CCAAACGATATAAAGGCCAGGGCTAAAGTCCGCCAGTGGAATGATTTTGCCCTGTCAGAGCTGGAAGTTGCCCCCTGGAT
GCTGCTGAAAAACCAGCTTATCTATCCTTCAGATGAACGACTGGCCCCAGAGGCGCTTCGAAGCACCATGGTGTGGGAAA
GCCAGCGCGCCCAGGGAATTCTGATCTTGGCACTTGAACATCAGGACTATCTGCTGCCAACGGGTTTCAGTCTCGCCGAT
ATCCATATCTGTGTTGGGCTGCTCATGCATTTTAAAACCGATTTACCGCTGAGACCTGAGCTTTTGCCTTATCTCAAGCG
CTGTATGTCACGTCCGGCGATAGCCAGATTGCAGGCCATGGGCGAATTGCCCCCCTTGCCTCTTTAG

Upstream 100 bases:

>100_bases
TTGGCATTTGTCACTTCTCGCATTTATTTGGGCAAATATGACCATTAATCGCTGCCAGCGCAAGCTCTACACTGGACGAA
ACCATCAACAAGGAGTTTGT

Downstream 100 bases:

>100_bases
GCAGTCGTTTGAAAGTGCGATGCACACAGACAATAAAAAGCCCGGCATTGGCCGGGCTTTTCAGTGTCAGGGATGAGATC
AGTTATTCAGATCCTGAAAG

Product: glutathione S-transferase-like protein

Products: HX; R-S-glutathione

Alternate protein names: GST-like protein yfcG [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDLTLLETNAICHYIAELGTDLL
PNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDERLAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLAD
IHICVGLLMHFKTDLPLRPELLPYLKRCMSRPAIARLQAMGELPPLPL

Sequences:

>Translated_208_residues
MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDLTLLETNAICHYIAELGTDLL
PNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDERLAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLAD
IHICVGLLMHFKTDLPLRPELLPYLKRCMSRPAIARLQAMGELPPLPL
>Mature_208_residues
MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDLTLLETNAICHYIAELGTDLL
PNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDERLAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLAD
IHICVGLLMHFKTDLPLRPELLPYLKRCMSRPAIARLQAMGELPPLPL

Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788640, Length=207, Percent_Identity=32.8502415458937, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: 2.5.1.18

Molecular weight: Translated: 23495; Mature: 23495

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDL
CEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEECCCE
TLLETNAICHYIAELGTDLLPNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDER
EEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
LAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLADIHICVGLLMHFKTDLPLRPE
CCHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHH
LLPYLKRCMSRPAIARLQAMGELPPLPL
HHHHHHHHHCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MITLYGTPNTRSVRVLWALEETGIAYDYRKMDLKGGECRQAEYLAINPNGKVPALVDGDL
CEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEECCCE
TLLETNAICHYIAELGTDLLPNDIKARAKVRQWNDFALSELEVAPWMLLKNQLIYPSDER
EEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
LAPEALRSTMVWESQRAQGILILALEHQDYLLPTGFSLADIHICVGLLMHFKTDLPLRPE
CCHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHH
LLPYLKRCMSRPAIARLQAMGELPPLPL
HHHHHHHHHCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: RX; glutathione

Specific reaction: RX + glutathione = HX + R-S-glutathione

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]