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The map label for this gene is yfgC [H]

Identifier: 119775639

GI number: 119775639

Start: 3012071

End: 3012871

Strand: Reverse

Name: yfgC [H]

Synonym: Sama_2507

Alternate gene names: 119775639

Gene position: 3012871-3012071 (Counterclockwise)

Preceding gene: 119775640

Following gene: 119775638

Centisome position: 69.97

GC content: 56.8

Gene sequence:

>801_bases
ATGAAAAAACTACTTACTCCCCTGGTGTTGCTCGGCCTTGTGAGCGGCTGTGTCACCACCCAATCTCCCACGGGGCGTAG
CCAAACATTATTGTTTTCGGCCGCAGAAATGAACCAGCTGGGCGCTGCCTCCTTTGAAGAAATGAAGAAGCAGCAAAAAA
TCAGCAAAGACACTAAACTCAACGCCTATGTTTCCTGCGTTGCCATGCGGGTAACAGCGGCGCTGCCCGACCAGACTCAA
GGATGGGAAGTGGTGGTGTTTGACTCGCCGCAGGTGAATGCCTTTGCTTTGCCGGGCGGGCACATTGGGGTGTATTCGGG
CCTCTTGAAAGTCGCCGAAAACCAGGACCAACTGGCGGTGGTGCTGGGTCATGAAGTGGCCCACGTACTGGCACAGCACA
GCAACGAGCAGGTGTCCCGCACTCAACTAACCAACACCGGCTTGCAACTGGCGGATGTGGCACTGGGCGCCGGAGGCGTG
TCCAATCGTAATCTCTATATGGCCGCGCTCGGCCTTGGCACTCAGGTGGGCTACATTCTGCCCTACGGCAGGGCTCAGGA
ATCTGAAGCCGATGTCATGGGGCTTGAGCTGATGGCTCGCGCCGGATTTGACCCGCGTGCTGGCACTCTGCTGTGGCAAA
ACATGGCCAAAGCCGGTGGTGACCAGGGGCCAGAGCTCTTGTCTACTCACCCATCCCACGGCACCCGTATTGCGGAATTG
GCCCGTCTGGAACAAAAAGTAATGCCACTGTACGAGGCCGCCAGGGCCTCCGGTGTGAAGAACTGTCAAATTACTAAATA
A

Upstream 100 bases:

>100_bases
CCAGTGCCAGCGGGTGAACCGGTGCGGTTGGCTTGGCGAAGAGCCGGGGGTAAAATGAGGAACAAACAGCGTTCTTCTCG
GCTTTAAAGGATTAATAAAC

Downstream 100 bases:

>100_bases
GCCAGACCTTTTTCGCCGCGTGGGCGCATTTTGTGATAGAATGCACGCCGATAATTTCATGTACGTTCAAGAGAAACCGA
ATTATGTCTGATAAATTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKKLLTPLVLLGLVSGCVTTQSPTGRSQTLLFSAAEMNQLGAASFEEMKKQQKISKDTKLNAYVSCVAMRVTAALPDQTQ
GWEVVVFDSPQVNAFALPGGHIGVYSGLLKVAENQDQLAVVLGHEVAHVLAQHSNEQVSRTQLTNTGLQLADVALGAGGV
SNRNLYMAALGLGTQVGYILPYGRAQESEADVMGLELMARAGFDPRAGTLLWQNMAKAGGDQGPELLSTHPSHGTRIAEL
ARLEQKVMPLYEAARASGVKNCQITK

Sequences:

>Translated_266_residues
MKKLLTPLVLLGLVSGCVTTQSPTGRSQTLLFSAAEMNQLGAASFEEMKKQQKISKDTKLNAYVSCVAMRVTAALPDQTQ
GWEVVVFDSPQVNAFALPGGHIGVYSGLLKVAENQDQLAVVLGHEVAHVLAQHSNEQVSRTQLTNTGLQLADVALGAGGV
SNRNLYMAALGLGTQVGYILPYGRAQESEADVMGLELMARAGFDPRAGTLLWQNMAKAGGDQGPELLSTHPSHGTRIAEL
ARLEQKVMPLYEAARASGVKNCQITK
>Mature_266_residues
MKKLLTPLVLLGLVSGCVTTQSPTGRSQTLLFSAAEMNQLGAASFEEMKKQQKISKDTKLNAYVSCVAMRVTAALPDQTQ
GWEVVVFDSPQVNAFALPGGHIGVYSGLLKVAENQDQLAVVLGHEVAHVLAQHSNEQVSRTQLTNTGLQLADVALGAGGV
SNRNLYMAALGLGTQVGYILPYGRAQESEADVMGLELMARAGFDPRAGTLLWQNMAKAGGDQGPELLSTHPSHGTRIAEL
ARLEQKVMPLYEAARASGVKNCQITK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=252, Percent_Identity=32.1428571428571, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1788840, Length=225, Percent_Identity=28.8888888888889, Blast_Score=87, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322940, Length=190, Percent_Identity=35.2631578947368, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 28313; Mature: 28313

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLTPLVLLGLVSGCVTTQSPTGRSQTLLFSAAEMNQLGAASFEEMKKQQKISKDTKL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHCCCCHH
NAYVSCVAMRVTAALPDQTQGWEVVVFDSPQVNAFALPGGHIGVYSGLLKVAENQDQLAV
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEE
VLGHEVAHVLAQHSNEQVSRTQLTNTGLQLADVALGAGGVSNRNLYMAALGLGTQVGYIL
EHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
PYGRAQESEADVMGLELMARAGFDPRAGTLLWQNMAKAGGDQGPELLSTHPSHGTRIAEL
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHH
ARLEQKVMPLYEAARASGVKNCQITK
HHHHHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure
MKKLLTPLVLLGLVSGCVTTQSPTGRSQTLLFSAAEMNQLGAASFEEMKKQQKISKDTKL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHCCCCHH
NAYVSCVAMRVTAALPDQTQGWEVVVFDSPQVNAFALPGGHIGVYSGLLKVAENQDQLAV
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEE
VLGHEVAHVLAQHSNEQVSRTQLTNTGLQLADVALGAGGVSNRNLYMAALGLGTQVGYIL
EHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
PYGRAQESEADVMGLELMARAGFDPRAGTLLWQNMAKAGGDQGPELLSTHPSHGTRIAEL
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHH
ARLEQKVMPLYEAARASGVKNCQITK
HHHHHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]