Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775633

Identifier: 119775633

GI number: 119775633

Start: 3003118

End: 3003318

Strand: Reverse

Name: 119775633

Synonym: Sama_2501

Alternate gene names: NA

Gene position: 3003318-3003118 (Counterclockwise)

Preceding gene: 119775634

Following gene: 119775632

Centisome position: 69.74

GC content: 53.73

Gene sequence:

>201_bases
ATGAGTCTGAGTAAACTTGCCGAAGCCAAGCATCTGCTTGAGCAGCCCATGACCCTTGGTAACTTGAAACGTTTTCAAGT
GCTTTGCCAGGGAGCCGATGAGGAAACCGCTGCGGTGAGGGAATTGCGCGAGCCTCTTAAGGCGCGCCTTGCCGATGATG
AAGATCTCTTTTTTACCGCGCTGGAGCAGGGGCTACTCTAG

Upstream 100 bases:

>100_bases
ACTGGCCGCAGGTTTTGCTTGGACCAAAGCAGTTTCTGGAGGAGCGTCGGCCCCTATTAGCGGGTCCCACTGATTGGGAT
ACCCAAGAAGAGGAATCGCC

Downstream 100 bases:

>100_bases
CCATTGAGTTGGGGACGTCTGCATCAGAACCTATTCAGGTGTGGGCTTGATTAATCCTACCTCGCCCCCATATCTAAGTC
ATGAGTGCTGTTCACGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MSLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTALEQGLL

Sequences:

>Translated_66_residues
MSLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTALEQGLL
>Mature_65_residues
SLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTALEQGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7414; Mature: 7282

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEQGLL
HHHCCC
>Mature Secondary Structure 
SLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEQGLL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA